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FFCP PHASE1:Mm9::chr11:6558513..6558577,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr11:6558513..6558577,+
|DHSsupport=NA
|short_description=p1@Ramp3
|DPIdataset=NA
|description=CAGE_peak_1_at_Ramp3_5end
|association_with_transcript=0bp_to_ENSMUST00000045374,ENSMUST00000139540,NM_019511,uc007hzd.1,uc011xrk.1_5end
|EntrezGene=56089
|EntrezGene=56089
|HGNC=
|HGNC=
|MCL_coexpression_id=7
|TSSclassifier=NA
|UniProt=Q9WUP1
|UniProt=Q9WUP1
|association_with_transcript=0bp_to_ENSMUST00000045374,ENSMUST00000139540,NM_019511,uc007hzd.1,uc011xrk.1_5end
|cluster_id=chr11:6558513..6558577,+
|description=CAGE_peak_1_at_Ramp3_5end
|id=chr11:6558513..6558577,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!2.78e-14!71;UBERON:0003075!2.78e-14!71;UBERON:0007284!2.78e-14!71;UBERON:0004121!8.11e-13!102;UBERON:0000924!8.11e-13!102;UBERON:0006601!8.11e-13!102;UBERON:0007811!2.32e-12!86;UBERON:0000153!5.15e-12!94;UBERON:0000033!3.50e-11!63;UBERON:0000073!4.44e-10!75;UBERON:0001016!4.44e-10!75;UBERON:0001017!5.09e-10!73;UBERON:0005743!5.09e-10!73;UBERON:0001049!1.28e-09!52;UBERON:0005068!1.28e-09!52;UBERON:0006241!1.28e-09!52;UBERON:0007135!1.28e-09!52;UBERON:0002616!2.02e-09!49;UBERON:0000955!2.94e-09!50;UBERON:0006238!2.94e-09!50;UBERON:0003056!4.58e-09!49;UBERON:0003080!2.27e-07!40;UBERON:0002780!3.97e-07!39;UBERON:0001890!3.97e-07!39;UBERON:0006240!3.97e-07!39;UBERON:0000475!4.75e-07!200;UBERON:0002021!7.08e-07!10;UBERON:0000411!7.08e-07!10;UBERON:0001950!7.08e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.09e-12,92;UBERON:0002346,9.30e-12,64;UBERON:0003075,9.30e-12,64;UBERON:0007284,9.30e-12,64;UBERON:0000073,1.98e-11,54;UBERON:0010371,1.04e-10,73;UBERON:0004121,2.46e-10,95;UBERON:0000924,2.46e-10,95;UBERON:0006601,2.46e-10,95;UBERON:0001016,5.87e-10,75;UBERON:0001017,6.76e-10,73;UBERON:0001049,1.04e-09,52;UBERON:0005068,1.04e-09,52;UBERON:0006241,1.04e-09,52;UBERON:0007135,1.04e-09,52;UBERON:0003056,3.29e-09,49;UBERON:0002616,6.01e-08,46;UBERON:0000955,8.40e-08,47;UBERON:0006238,8.40e-08,47;UBERON:0003080,1.69e-07,40;UBERON:0002780,2.99e-07,39;UBERON:0001890,2.99e-07,39;UBERON:0006240,2.99e-07,39;UBERON:0002021,6.33e-07,10;UBERON:0000411,6.33e-07,10;UBERON:0001950,6.33e-07,10
|phase1_expression=63.4189434534984,0,0,0,0,0,0.467225281191051,1.54947988129892,455.733093604945,400.484404536931,65.2340458939174,31.1909141671765,21.2288905114695,22.4670434216823,0.333109761815663,0.607425802169478,0.699561878128147,1.57731082679119,0.411343300817216,1.27316895539409,41.5861688838731,0,0,0.159992422793407,0.68822784320151,0,0,0.215471232685889,0.190023419456374,0,0.443461021310609,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,1.51076181570693,1.01376931219515,1.10128051297009,7.04152209913235,0.436050312760893,1.09843091367236,0,3.77963338388479,7.18762821824858,0,187.143432638927,72.5962606147722,3.08711323243136,1.14613375975503,2.06268836910977,8.29497489524351,7.40587370980846,5.07065122804943,10.5041804941431,4.4464739805557,0.899899717281399,1.97773272513395,0,0.599200221036809,1.15265491596466,1.8664130215526,3.64516033495565,1.89292465216244,16.8534080798244,24.2955395046775,2.32732518508413,3.06705507258356,1.83843757322004,95.8008164694682,153.863242392651,112.286375810314,8.17694983927202,8.05091263701205,6.25096044668112,5.58365998002762,6.75315132038016,5.04234217663473,17.9723437138937,13.6676813567139,21.6223357157349,12.8734528666413,2.64500460373749,9.27566363845369,5.16254326188832,0,0,0,0.448026887097336,5.61777680527007,0,0,0,21.9715734851622,0,0,0,1.29894624606728,1.52015919285059,0.505524445014783,8.22123933977232,5.17875767294343,20.1881309128162,8.32729568477452,24.0527727866592,17.0655467969483,18.0867168663147,15.2865319276416,15.8339905075391,14.0901131608593,1.44599356919912,2.65383165584962,2.10296904931632,1.54589062922275,3.39412677194655,0,21.6657789788545,38.5381940536757,1.78819938646014,7.6681679683789,0,2.41433431438823,10.0359728401231,20.1300265240196,9.67538511269056,15.1227158567281,18.1557974704535,128.620799582368,69.7637431191358,9.57290020192973,44.9109163902436,339.659387334859,7.78634866779954,5.07469727554544,6.66716102857071,9.72335500948886,7.83665052745718,14.0155188251735,7.94305065766069,6.74652416830048,18.6266426932091,1.94011193639558,5.10586416453112,3.34307135911503,4.16471891612392,3.89266148915837,4.179025998266,5.14455341019859,4.97585667046233,0,0,0.568326998791185,0.828503090142008,2.11073453982987,3.06105504483725,3.55117103377815,2.36117078096885,1.69693824176116,2.32533944750408,3.75582761959467,3.61972561338225,1.48103864922132,4.26835406605648,8.75543143095242,13.3041988557052,8.78200461164202,13.1522290385164,8.20130799400096,3.60166143327496,0.330418782983798,1.85115396664481,5.33220626338085,6.50262681209228,3.8660238396628,1.61346819698674,1.55664630691409,1.71203063501303,2.37264530772256,1.64698954724011,1.50801125280162,3.78017296878187,2.14460495831032,2.69645822596266,3.02593269824572,2.78797782556114,12.7077493638565,5.71242563048644,9.01661885384643,12.8300336542548,14.7403890247396,17.2534116930184,22.4489706791113,17.8608279055319,20.2528358915373,29.4919221773103,0.592905254174298,0.333690211432188,0.196558995113203,0,0.405720242777006,0.482354319504834,0.25462585178142,0.287696137450811,2.10775794807546,0,2.87536413054709,0.372140947668503,1.24815069245824,0.757736633841335,0.358794827043824,0.964887042726734,7.944387177164,1.70542270593436,0.651859905768103,1.18821560042632,0.234690248288502,0.502518772325447,0.952174563544055,9.75668239288994,7.40885177299098,10.6303051031412,6.53764551495697,9.5040722535128,6.04397436530635,15.7667473853848,0,0,0,1.10374698521893,7.06422595946285,4.57125577709592,47.0493293231058,1.51482556322624,5.67914794949262,5.46614242015294,6.24727853425117,1.19484398976276,2.89638276307112,0.849229592366497,4.04810701674894,3.21481443702443,6.32460444714438,3.53453448063988,27.3944364451958,6.7664929393557,6.02681749608232,41.4075008661064,13.2745138339963,8.98288353773431,6.04647113929502,3.96070667487386,3.54362271456927,3.3817866273832,2.84271122485043,5.81653967164009,3.56497378384721,3.16036757935816,7.37930260024991,4.12542172992747,10.5536277783674,8.64293251350289,14.8762486350168,7.93047029616891,8.15765074754458,13.7343989553594,12.9993726275676,18.8768268451052,146.435145831755,58.0419874166867,0.441056796109924,3.13283880588812,5.00539722757307,1.80938774784468,3.58117032009409,3.28281799490123,2.62332752966866,4.07935664423121,1.36696704638282,6.60437977482312,4.62986318424279,0.188368457004691,0.820165366326151,0.228778173206523,43.514478078427,21.9723780148143,35.1027933463236,7.63736494412091,6.01038387804157,3.25311147402958,3.34816556547584,6.27264888043406,5.8957892211468,6.20375993370175,4.95920734352016,3.66458318777641,2.85152941241944,2.4853572523477,0.56369293868419,3.28936401296753,3.64008679005615,2.13896307178452,3.22899558694328,1.35164900392623,2.11243029562357,5.59878854828985,3.56521771047417,1.69108884578204,10.3690802252832,3.16011120628178,5.47358081283443,12.8388696456034,22.3463815521807,14.859215740401,11.7221999320946,6.00977247599844,6.35064966850682,4.03865799792591,3.50551310612999,2.72230699869469,2.43644701849381,1.92423683280659,3.85693777199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|phase1_expression=63.4189434534984,0,0,0,0,0,0.467225281191051,1.54947988129892,455.733093604945,400.484404536931,65.2340458939174,31.1909141671765,21.2288905114695,22.4670434216823,0.333109761815663,0.607425802169478,0.699561878128147,1.57731082679119,0.411343300817216,1.27316895539409,41.5861688838731,0,0,0.159992422793407,0.68822784320151,0,0,0.215471232685889,0.190023419456374,0,0.443461021310609,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,1.51076181570693,1.01376931219515,1.10128051297009,7.04152209913235,0.436050312760893,1.09843091367236,0,3.77963338388479,7.18762821824858,0,187.143432638927,72.5962606147722,3.08711323243136,1.14613375975503,2.06268836910977,8.29497489524351,7.40587370980846,5.07065122804943,10.5041804941431,4.4464739805557,0.899899717281399,1.97773272513395,0,0.599200221036809,1.15265491596466,1.8664130215526,3.64516033495565,1.89292465216244,16.8534080798244,24.2955395046775,2.32732518508413,3.06705507258356,1.83843757322004,95.8008164694682,153.863242392651,112.286375810314,8.17694983927202,8.05091263701205,6.25096044668112,5.58365998002762,6.75315132038016,5.04234217663473,17.9723437138937,13.6676813567139,21.6223357157349,12.8734528666413,2.64500460373749,9.27566363845369,5.16254326188832,0,0,0,0.448026887097336,5.61777680527007,0,0,0,21.9715734851622,0,0,0,1.29894624606728,1.52015919285059,0.505524445014783,8.22123933977232,5.17875767294343,20.1881309128162,8.32729568477452,24.0527727866592,17.0655467969483,18.0867168663147,15.2865319276416,15.8339905075391,14.0901131608593,1.44599356919912,2.65383165584962,2.10296904931632,1.54589062922275,3.39412677194655,0,21.6657789788545,38.5381940536757,1.78819938646014,7.6681679683789,0,2.41433431438823,10.0359728401231,20.1300265240196,9.67538511269056,15.1227158567281,18.1557974704535,128.620799582368,69.7637431191358,9.57290020192973,44.9109163902436,339.659387334859,7.78634866779954,5.07469727554544,6.66716102857071,9.72335500948886,7.83665052745718,14.0155188251735,7.94305065766069,6.74652416830048,18.6266426932091,1.94011193639558,5.10586416453112,3.34307135911503,4.16471891612392,3.89266148915837,4.179025998266,5.14455341019859,4.97585667046233,0,0,0.568326998791185,0.828503090142008,2.11073453982987,3.06105504483725,3.55117103377815,2.36117078096885,1.69693824176116,2.32533944750408,3.75582761959467,3.61972561338225,1.48103864922132,4.26835406605648,8.75543143095242,13.3041988557052,8.78200461164202,13.1522290385164,8.20130799400096,3.60166143327496,0.330418782983798,1.85115396664481,5.33220626338085,6.50262681209228,3.8660238396628,1.61346819698674,1.55664630691409,1.71203063501303,2.37264530772256,1.64698954724011,1.50801125280162,3.78017296878187,2.14460495831032,2.69645822596266,3.02593269824572,2.78797782556114,12.7077493638565,5.71242563048644,9.01661885384643,12.8300336542548,14.7403890247396,17.2534116930184,22.4489706791113,17.8608279055319,20.2528358915373,29.4919221773103,0.592905254174298,0.333690211432188,0.196558995113203,0,0.405720242777006,0.482354319504834,0.25462585178142,0.287696137450811,2.10775794807546,0,2.87536413054709,0.372140947668503,1.24815069245824,0.757736633841335,0.358794827043824,0.964887042726734,7.944387177164,1.70542270593436,0.651859905768103,1.18821560042632,0.234690248288502,0.502518772325447,0.952174563544055,9.75668239288994,7.40885177299098,10.6303051031412,6.53764551495697,9.5040722535128,6.04397436530635,15.7667473853848,0,0,0,1.10374698521893,7.06422595946285,4.57125577709592,47.0493293231058,1.51482556322624,5.67914794949262,5.46614242015294,6.24727853425117,1.19484398976276,2.89638276307112,0.849229592366497,4.04810701674894,3.21481443702443,6.32460444714438,3.53453448063988,27.3944364451958,6.7664929393557,6.02681749608232,41.4075008661064,13.2745138339963,8.98288353773431,6.04647113929502,3.96070667487386,3.54362271456927,3.3817866273832,2.84271122485043,5.81653967164009,3.56497378384721,3.16036757935816,7.37930260024991,4.12542172992747,10.5536277783674,8.64293251350289,14.8762486350168,7.93047029616891,8.15765074754458,13.7343989553594,12.9993726275676,18.8768268451052,146.435145831755,58.0419874166867,0.441056796109924,3.13283880588812,5.00539722757307,1.80938774784468,3.58117032009409,3.28281799490123,2.62332752966866,4.07935664423121,1.36696704638282,6.60437977482312,4.62986318424279,0.188368457004691,0.820165366326151,0.228778173206523,43.514478078427,21.9723780148143,35.1027933463236,7.63736494412091,6.01038387804157,3.25311147402958,3.34816556547584,6.27264888043406,5.8957892211468,6.20375993370175,4.95920734352016,3.66458318777641,2.85152941241944,2.4853572523477,0.56369293868419,3.28936401296753,3.64008679005615,2.13896307178452,3.22899558694328,1.35164900392623,2.11243029562357,5.59878854828985,3.56521771047417,1.69108884578204,10.3690802252832,3.16011120628178,5.47358081283443,12.8388696456034,22.3463815521807,14.859215740401,11.7221999320946,6.00977247599844,6.35064966850682,4.03865799792591,3.50551310612999,2.72230699869469,2.43644701849381,1.92423683280659,3.85693777199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|short_description=p1@Ramp3
}}
}}

Latest revision as of 22:07, 1 October 2015

Short description:p1@Ramp3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ramp3_5end
Coexpression cluster:MCL_coexpression_mm9:7
Association with transcript: 0bp_to_ENSMUST00000045374, ENSMUST00000139540, NM_019511, uc007hzd.1, uc011xrk.1_5end
EntrezGene:Ramp3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ramp3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G763.42
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7455.73
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2400.48
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E665.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F131.19
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E421.23
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E822.47
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.58
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A341.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.51
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.04
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.78
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9187.14
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A172.60
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.09
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C38.29
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C610.50
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.87
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.65
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F116.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D524.30
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.07
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D395.80
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3153.86
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7112.29
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.18
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.05
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.25
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.58
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.04
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D617.97
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F613.67
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E121.62
Mouse Schwann, donor1.CNhs12507.11728-123D912.87
Mouse Schwann, donor2.CNhs12573.11746-123F92.65
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G39.28
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.62
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G621.97
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B68.22
accessory axillary lymph node, adult.CNhs10475.1063-29H95.18
adrenal gland, adult.CNhs10508.49-24D720.19
adrenal gland, embryo E14.CNhs11038.406-44C58.33
adrenal gland, embryo E16.CNhs11004.1254-43D624.05
adrenal gland, embryo E17.CNhs11043.1263-45I117.07
adrenal gland, embryo E18.CNhs11026.1262-18F518.09
adrenal gland, neonate N00.CNhs11191.1311-23C115.29
adrenal gland, neonate N25.CNhs11223.1377-27I315.83
amnion, adult pregnant day17.5.CNhs10488.583-22A814.09
aorta, adult.CNhs10498.46-23H11.45
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F52.10
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C33.39
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B221.67
cerebellum, neonate N30.CNhs11135.1395-42I238.54
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C77.67
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.41
corpora quadrigemina, adult.CNhs10501.16-22A410.04
corpus striatum, adult.CNhs10487.19-21D820.13
corpus striatum, neonate N00.CNhs11226.630-43F19.68
cortex, adult.CNhs10473.12-14D515.12
cortex, neonate N30.CNhs11107.1392-42F218.16
diencephalon, adult.CNhs10482.20-12F2128.62
diencephalon, neonate N30.CNhs11201.1388-42B269.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.57
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A244.91
epididymis, adult.CNhs10490.58-23B2339.66
eyeball, adult.CNhs10484.31-12G47.79
eyeball, embryo E12.CNhs11016.345-16C65.07
eyeball, embryo E14.CNhs10521.399-16E26.67
eyeball, embryo E15.CNhs10593.426-16C99.72
eyeball, embryo E17.CNhs11023.1261-18D47.84
eyeball, neonate N00.CNhs11207.633-15C614.02
eyeball, neonate N01.CNhs11140.1532-43E77.94
eyeball, neonate N02.CNhs11205.1551-44G86.75
eyeball, neonate N16.CNhs11188.777-19A218.63
forelimb, embryo E11.CNhs10596.335-25E21.94
forelimb, embryo E12.CNhs10600.359-14H25.11
forelimb, embryo E13.CNhs10589.384-1E23.34
forelimb, embryo E14.CNhs10577.413-26A84.16
forelimb, embryo E15.CNhs11007.437-20E73.89
forelimb, embryo E17.CNhs10598.1517-43C44.18
forelimb, embryo E18.CNhs11008.1520-43B55.14
gonad, embryo E13.CNhs11044.1564-45I64.98
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I93.06
heart, embryo E14.CNhs10597.403-26D43.55
heart, embryo E15.CNhs11017.431-16C82.36
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E52.33
heart, embryo E18.CNhs11030.1283-20G33.76
heart, neonate N00.CNhs11213.639-21E33.62
heart, neonate N03.CNhs11221.1349-25I21.48
heart, neonate N10.CNhs11118.749-24G14.27
heart, neonate N16.CNhs11209.782-15G18.76
heart, neonate N20.CNhs11127.821-26I613.30
heart, neonate N25.CNhs11196.1351-25D38.78
heart, neonate N30.CNhs11202.1390-42D213.15
hippocampus, adult.CNhs10478.13-16E88.20
hippocampus, neonate N00.CNhs11228.627-43G13.60
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A31.85
intestine, embryo E12.CNhs11019.1251-16I55.33
intestine, embryo E13.CNhs11010.381-16D56.50
intestine, embryo E15.CNhs10602.976-16D83.87
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F71.71
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E91.65
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F23.78
intestine, neonate N10.CNhs11098.755-23A52.14
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E33.03
intestine, neonate N30.CNhs11131.1384-42G12.79
kidney, embryo E14.CNhs10606.411-4I912.71
kidney, embryo E15.CNhs10997.434-16F85.71
kidney, embryo E16.CNhs10584.464-22A59.02
kidney, embryo E17.CNhs11028.483-18I212.83
kidney, embryo E18.CNhs11001.1288-20C714.74
kidney, neonate N00.CNhs11214.646-21G717.25
kidney, neonate N10.CNhs11206.758-6D522.45
kidney, neonate N20.CNhs11113.832-19I117.86
kidney, neonate N25.CNhs11122.1353-25F320.25
kidney, neonate N30.CNhs11203.1385-42H129.49
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F42.11
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B17.94
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C69.76
lung, neonate N06.CNhs11212.683-20E57.41
lung, neonate N07.CNhs11111.715-19A310.63
lung, neonate N10.CNhs11219.750-23E66.54
lung, neonate N20.CNhs11109.822-18A49.50
lung, neonate N25.CNhs11119.1359-25C76.04
lung, neonate N30.CNhs11133.1394-42H215.77
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C27.06
medulla oblongata, neonate N30.CNhs11200.1396-42A34.57
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C747.05
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.68
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.47
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.25
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D66.32
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I727.39
ovary, embryo E18.CNhs11040.505-44H76.77
ovary, neonate N00.CNhs11217.1299-22I46.03
oviduct, adult pregnant day01.CNhs10500.988-6G641.41
pancreas, adult.CNhs10486.34-16E413.27
pancreas, embryo E14.CNhs11012.405-44F48.98
pancreas, embryo E15.CNhs11042.1556-45F26.05
pancreas, embryo E16.CNhs11003.460-26E53.96
pancreas, embryo E17.CNhs10599.1558-45G33.54
pancreas, embryo E18.CNhs10580.1535-43I73.38
pancreas, neonate N00.CNhs11105.645-26G92.84
pancreas, neonate N01.CNhs11138.1531-43D75.82
pancreas, neonate N02.CNhs11139.1539-43D83.56
pancreas, neonate N16.CNhs11136.787-43B63.16
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G810.55
pituitary gland, embryo E12.CNhs11018.346-16E68.64
pituitary gland, embryo E13.CNhs11009.370-44C714.88
pituitary gland, embryo E14.CNhs11037.398-44A57.93
pituitary gland, embryo E15.CNhs10592.427-16B98.16
pituitary gland, embryo E16.CNhs11036.449-43F613.73
pituitary gland, embryo E17.CNhs11039.1265-44F513.00
pituitary gland, neonate N00.CNhs11190.1308-22E918.88
placenta, adult pregnant day10.CNhs10472.539-13I7146.44
placenta, adult pregnant day17.CNhs10464.577-18G358.04
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C33.13
skin, neonate N00.CNhs11124.650-25G45.01
skin, neonate N03.CNhs11215.662-22H31.81
skin, neonate N06.CNhs11097.693-20I53.58
skin, neonate N10.CNhs11108.762-6C43.28
small intestine, neonate N16.CNhs11114.790-21I12.62
spinal cord, adult.CNhs10505.24-13C94.08
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C16.60
spleen, embryo E18.CNhs11011.1271-21F24.63
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C643.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C921.97
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D335.10
stomach, adult.CNhs10503.33-1H67.64
stomach, embryo E12.CNhs10588.356-43E36.01
stomach, embryo E15.CNhs10603.1252-16G83.25
stomach, embryo E16.CNhs11022.459-17D43.35
stomach, embryo E17.CNhs11006.1035-18D56.27
stomach, embryo E18.CNhs10999.1286-20C65.90
stomach, neonate N03.CNhs11193.1340-24B86.20
stomach, neonate N07.CNhs11210.718-18A94.96
stomach, neonate N25.CNhs11104.1355-25E43.66
stomach, neonate N30.CNhs11134.1386-42I12.85
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F53.29
testis, embryo E15.CNhs11034.443-27C53.64
testis, embryo E16.CNhs11033.470-26G52.14
testis, embryo E17.CNhs11029.486-18I53.23
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B72.11
testis, neonate N07.CNhs11222.726-26I45.60
testis, neonate N10.CNhs11204.763-44D93.57
testis, neonate N20.CNhs11110.839-18H31.69
testis, neonate N30.CNhs11130.1391-42E210.37
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I45.47
thymus, embryo E15.CNhs11005.430-45I212.84
thymus, embryo E16.CNhs11002.456-26C522.35
thymus, embryo E17.CNhs10581.478-18C114.86
thymus, embryo E18.CNhs10595.1273-19G411.72
thymus, neonate N02.CNhs11181.1541-43F86.01
thymus, neonate N03.CNhs11137.2104-43C76.35
thymus, neonate N06.CNhs11197.681-26C44.04
thymus, neonate N07.CNhs11211.713-19D33.51
thymus, neonate N10.CNhs11194.748-24E42.72
thymus, neonate N20.CNhs11186.820-7A22.44
thymus, neonate N25.CNhs11125.1362-25G71.92
thymus, neonate N30.CNhs11132.1393-42G23.86
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.90
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.68
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F529.09
uterus, adult.CNhs10509.92-27E5161.91
vagina, adult.CNhs10502.89-27D549.52
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A161.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A260.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A349.84
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D747.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A423.98
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A533.24
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A637.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A732.87
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A833.99
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A929.51
whole body, embryo E11.CNhs11014.324-5I82.08
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H27.00
whole body, embryo E14.5.CNhs10578.420-27D25.11
whole body, embryo E14.CNhs10519.395-14B13.77
whole body, embryo E16.CNhs10514.453-14F22.57
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.06
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.07
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.97
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.64
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.57
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.32
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.18
whole body, embryo E17.5.CNhs10513.490-9F92.89
whole body, embryo E17.CNhs10517.475-3I510.49
whole body, embryo E18.CNhs10516.493-3B35.38
whole body, neonate N00.CNhs10525.657-19C25.59
whole body, neonate N01.CNhs10576.659-23C65.16
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B41.85





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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