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FFCP PHASE1:Mm9::chr11:83344007..83344035,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr11:83344007..83344035,-
|DHSsupport=NA
|short_description=p1@Ccl5
|DPIdataset=NA
|description=CAGE_peak_1_at_Ccl5_5end
|association_with_transcript=0bp_to_ENSMUST00000035938,ENSMUST00000125015,NM_013653,uc007kpi.2_5end
|EntrezGene=20304
|EntrezGene=20304
|HGNC=
|HGNC=
|MCL_coexpression_id=86
|TSSclassifier=NA
|UniProt=P30882,Q5XZF2
|UniProt=P30882,Q5XZF2
|association_with_transcript=0bp_to_ENSMUST00000035938,ENSMUST00000125015,NM_013653,uc007kpi.2_5end
|cluster_id=chr11:83344007..83344035,-
|description=CAGE_peak_1_at_Ccl5_5end
|id=chr11:83344007..83344035,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002320,2.58e-07,46;CL:0000134,2.58e-07,46
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!1.37e-16!48;UBERON:0001007!2.72e-15!128;UBERON:0001555!2.72e-15!128;UBERON:0007026!2.72e-15!128;UBERON:0004119!2.84e-15!130;UBERON:0000925!2.84e-15!130;UBERON:0006595!2.84e-15!130;UBERON:0002405!3.39e-15!70;UBERON:0002390!6.22e-15!45;UBERON:0003061!6.22e-15!45;UBERON:0004921!2.22e-14!126;UBERON:0004185!2.22e-14!126;UBERON:0000077!1.32e-08!97;UBERON:0002371!2.86e-08!16;UBERON:0001041!4.11e-08!92;UBERON:0003104!4.64e-08!131;UBERON:0009142!4.64e-08!131;UBERON:0004177!6.26e-08!29;UBERON:0000926!1.29e-07!193;UBERON:0004120!1.29e-07!193;UBERON:0006603!1.29e-07!193;UBERON:0005057!2.82e-07!51;UBERON:0003081!3.19e-07!88;UBERON:0007023!3.45e-07!51;UBERON:0005911!5.97e-07!69;UBERON:0005409!7.15e-07!59
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.54e-17,48;UBERON:0002405,1.54e-17,48;UBERON:0002390,8.80e-16,45;UBERON:0003061,8.80e-16,45;UBERON:0001007,7.80e-15,116;UBERON:0001555,7.80e-15,116;UBERON:0007026,7.80e-15,116;UBERON:0004119,8.51e-15,118;UBERON:0000925,8.51e-15,118;UBERON:0006595,8.51e-15,118;UBERON:0004921,6.67e-14,114;UBERON:0002371,1.16e-08,16;UBERON:0000077,1.35e-08,35;UBERON:0004177,2.32e-08,29;UBERON:0005057,2.32e-08,29;UBERON:0007023,1.36e-07,51;UBERON:0001041,1.62e-07,80;UBERON:0003081,2.26e-07,87;UBERON:0002384,2.58e-07,46;UBERON:0005911,3.16e-07,69;UBERON:0001474,5.47e-07,22;UBERON:0004765,5.47e-07,22;UBERON:0001434,5.47e-07,22;UBERON:0003929,6.29e-07,55
|phase1_expression=0,13.2610654902957,6.82498859084304,3.93203474698879,12.5223932486587,2.68606835059024,3.03696432774183,19.3684985162364,12.8117737158017,3.7450324211519,1.36974374580404,0.638177271962691,7.19043065711064,3.75907730401689,31.645427372488,34.8257459910501,10.4934281719222,147.951755553013,156.310454310542,146.838819522118,23.9822078226017,1279.36390622341,502.548394303312,53.4374692129978,81.6697040599125,12.6331032105304,8.18447792702242,11.4199753323521,283.51494182891,534.807935350573,552.108971531709,0,0,0,4.33277429626912,16.4572298904907,6.53341940039581,5.4409111995798,1.5626706890476,4.18818995179039,5.88231488031014,6.14740936462601,4.36959317728038,31.7259981298455,23.4180711117079,14.6837401729345,14.8654355426127,0.218025156380447,0.878744730937887,1.36100929351998,4.61955191363696,0,3.35565212115473,60.2050577869416,516.91226308111,2.82985379639542,0.85960031981627,1.54701627683233,0,0,0,1.35537812827653,9.78224275722253,1946.03313862103,4075.1182801385,2234.45996150548,8.98800331555214,9.98967593836042,0,0,0,0.285650984403804,0.220868540951614,0,0,0,1.10115880999389,0.127687338085188,0.307213066512487,0,0,0,0.279182999001381,1.68828783009504,1.5279824777681,0,0,0,5.6794644999888,0.529000920747499,5.50742528533188,19.7897491705719,15.6393406752783,0,3.24888208723835,1.34408066129201,31.8808833699077,3.06774580640504,2.07828803682295,2.47337702157238,0,15.3991772897181,28.028576367731,0,5.41227602528035,4.56047757855178,2.52762222507392,68.2819600719979,852.423512966489,114.44888921898,1.90833859442749,0.608930956624282,0.922461989024234,2.86373017049983,2.58695155698551,4.77533047052767,0,38.0296308699368,72.5380652598897,1.29413479957927,6.18356251689102,9.21262980956922,29.8226817948995,0.585561594023094,0.628340120440365,326.985030666997,19.0506047964413,20.3966928537759,49.4303183314222,0.748953197024114,2.74500361691176,1.00523481690292,1.04294592115366,0.255715457330331,1.24672826735736,0.811206315338788,0.203678727700633,28.4891962697113,15.1633655060205,6.52369753248069,0,0.229902104433473,0,0.452114453507145,0.340182495756639,1.0249097622788,0.374806898238915,2.84573707812917,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0.348252166522167,0.205782136407943,0.59710280045548,44.941643988047,13.6394390770799,90.3639928077985,0,0.234526059981096,0,0.23674473558521,0.590292695242212,0.154267112887378,0.465067889500816,0.804820204198858,0.583826711835847,0.822799249567402,1.64167464079095,3.16168357228837,2.04679982395465,8.34290438105992,8.72341721942416,1.89260953707715,0.720332286654991,1040.158328833,59.765828065961,0,0.464473343720877,1.41754207454303,1.81515172161008,2.2237804384487,3.04361001780095,41.758557415917,5.10566759644434,16.3367885720175,12.9321706826748,15.9870551437679,32.357498711552,44.0921621744376,86.228171319141,0.189667900953082,0.456994050438915,1.1270773567308,0.610953983535943,0.387904974335251,0.350679099451593,2.08680572510049,3.83786384746966,5.33795674660674,4.44229790118482,10.6722945751374,0,0.196558995113203,0.674586337154561,0,1.20588579876208,7.38414970166117,7.19240343627027,10.7009249671523,27.7307027319962,27.3159592401974,62.8918201559771,63.6556853153704,20.9640468696103,12.0196267059681,13.9908621195376,327.01314659489,0.37898282354097,0.162964976442026,0.509235257325564,0.938760993154008,1.34005005953453,0.952174563544055,2.92700471786698,29.4777719478577,29.0118743439895,22.8020319180207,87.8307366876356,71.146212528749,79.9909293955759,1201.806532996,8399.53547521233,57.5364199432272,66.7766926057453,3.53211297973142,1.05490517932983,0.983609672260053,2.01976741763498,1.26203287766503,1.56175497718655,0,0.238968797952552,0,0,0,0.584511715822624,0,1.60660658210904,12.3487874131194,1.06839362200353,0.488660878060728,25.7353391837155,19.9117707509944,0.728341908464944,1.209294227859,0.943025398779491,2.36241514304618,6.14870295887855,3.87642439752332,3.63533729477506,7.48644494607915,36.9763006784905,7.37930260024991,11.3449097573006,6.12791290356818,0.18006109403131,0.129358683782755,0.214337035031592,0,0.356737635204141,0.329098041204242,0,7.04015124191131,1.0591603543191,13.8932890774626,1.81374878235628,0.807322133479528,1.20625849856312,0.716234064018819,0.328281799490123,13.699599321603,1.48340241608408,309.788906886507,10.3193433981611,43.3355194045125,37.2969544869288,85.2971980979197,82.8176987007612,50.3136152781812,33.0285427483833,69.2381868760163,33.413471630529,0,1.21991680276109,0.972048067396211,0.836353184057875,1.31017538247707,0.809186078308924,9.4224939526883,6.54389854960074,18.79417112731,65.8619671872141,0.56369293868419,0.149516546043979,0.165458490457098,0.583353565032143,0.387479470433193,1.18269287843545,0.821500670520278,2.3436789271911,1.46803082195995,0.966336483304024,0.864090018773596,204.143183925803,25.7461023418509,28.9644899204813,21.3070149683584,13.6060288707286,19.8681354781265,59.2563566133446,54.7928145817681,66.6378569657774,53.0399374318799,77.4345101850935,120.750314236553,95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|phase1_expression=0,13.2610654902957,6.82498859084304,3.93203474698879,12.5223932486587,2.68606835059024,3.03696432774183,19.3684985162364,12.8117737158017,3.7450324211519,1.36974374580404,0.638177271962691,7.19043065711064,3.75907730401689,31.645427372488,34.8257459910501,10.4934281719222,147.951755553013,156.310454310542,146.838819522118,23.9822078226017,1279.36390622341,502.548394303312,53.4374692129978,81.6697040599125,12.6331032105304,8.18447792702242,11.4199753323521,283.51494182891,534.807935350573,552.108971531709,0,0,0,4.33277429626912,16.4572298904907,6.53341940039581,5.4409111995798,1.5626706890476,4.18818995179039,5.88231488031014,6.14740936462601,4.36959317728038,31.7259981298455,23.4180711117079,14.6837401729345,14.8654355426127,0.218025156380447,0.878744730937887,1.36100929351998,4.61955191363696,0,3.35565212115473,60.2050577869416,516.91226308111,2.82985379639542,0.85960031981627,1.54701627683233,0,0,0,1.35537812827653,9.78224275722253,1946.03313862103,4075.1182801385,2234.45996150548,8.98800331555214,9.98967593836042,0,0,0,0.285650984403804,0.220868540951614,0,0,0,1.10115880999389,0.127687338085188,0.307213066512487,0,0,0,0.279182999001381,1.68828783009504,1.5279824777681,0,0,0,5.6794644999888,0.529000920747499,5.50742528533188,19.7897491705719,15.6393406752783,0,3.24888208723835,1.34408066129201,31.8808833699077,3.06774580640504,2.07828803682295,2.47337702157238,0,15.3991772897181,28.028576367731,0,5.41227602528035,4.56047757855178,2.52762222507392,68.2819600719979,852.423512966489,114.44888921898,1.90833859442749,0.608930956624282,0.922461989024234,2.86373017049983,2.58695155698551,4.77533047052767,0,38.0296308699368,72.5380652598897,1.29413479957927,6.18356251689102,9.21262980956922,29.8226817948995,0.585561594023094,0.628340120440365,326.985030666997,19.0506047964413,20.3966928537759,49.4303183314222,0.748953197024114,2.74500361691176,1.00523481690292,1.04294592115366,0.255715457330331,1.24672826735736,0.811206315338788,0.203678727700633,28.4891962697113,15.1633655060205,6.52369753248069,0,0.229902104433473,0,0.452114453507145,0.340182495756639,1.0249097622788,0.374806898238915,2.84573707812917,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0.348252166522167,0.205782136407943,0.59710280045548,44.941643988047,13.6394390770799,90.3639928077985,0,0.234526059981096,0,0.23674473558521,0.590292695242212,0.154267112887378,0.465067889500816,0.804820204198858,0.583826711835847,0.822799249567402,1.64167464079095,3.16168357228837,2.04679982395465,8.34290438105992,8.72341721942416,1.89260953707715,0.720332286654991,1040.158328833,59.765828065961,0,0.464473343720877,1.41754207454303,1.81515172161008,2.2237804384487,3.04361001780095,41.758557415917,5.10566759644434,16.3367885720175,12.9321706826748,15.9870551437679,32.357498711552,44.0921621744376,86.228171319141,0.189667900953082,0.456994050438915,1.1270773567308,0.610953983535943,0.387904974335251,0.350679099451593,2.08680572510049,3.83786384746966,5.33795674660674,4.44229790118482,10.6722945751374,0,0.196558995113203,0.674586337154561,0,1.20588579876208,7.38414970166117,7.19240343627027,10.7009249671523,27.7307027319962,27.3159592401974,62.8918201559771,63.6556853153704,20.9640468696103,12.0196267059681,13.9908621195376,327.01314659489,0.37898282354097,0.162964976442026,0.509235257325564,0.938760993154008,1.34005005953453,0.952174563544055,2.92700471786698,29.4777719478577,29.0118743439895,22.8020319180207,87.8307366876356,71.146212528749,79.9909293955759,1201.806532996,8399.53547521233,57.5364199432272,66.7766926057453,3.53211297973142,1.05490517932983,0.983609672260053,2.01976741763498,1.26203287766503,1.56175497718655,0,0.238968797952552,0,0,0,0.584511715822624,0,1.60660658210904,12.3487874131194,1.06839362200353,0.488660878060728,25.7353391837155,19.9117707509944,0.728341908464944,1.209294227859,0.943025398779491,2.36241514304618,6.14870295887855,3.87642439752332,3.63533729477506,7.48644494607915,36.9763006784905,7.37930260024991,11.3449097573006,6.12791290356818,0.18006109403131,0.129358683782755,0.214337035031592,0,0.356737635204141,0.329098041204242,0,7.04015124191131,1.0591603543191,13.8932890774626,1.81374878235628,0.807322133479528,1.20625849856312,0.716234064018819,0.328281799490123,13.699599321603,1.48340241608408,309.788906886507,10.3193433981611,43.3355194045125,37.2969544869288,85.2971980979197,82.8176987007612,50.3136152781812,33.0285427483833,69.2381868760163,33.413471630529,0,1.21991680276109,0.972048067396211,0.836353184057875,1.31017538247707,0.809186078308924,9.4224939526883,6.54389854960074,18.79417112731,65.8619671872141,0.56369293868419,0.149516546043979,0.165458490457098,0.583353565032143,0.387479470433193,1.18269287843545,0.821500670520278,2.3436789271911,1.46803082195995,0.966336483304024,0.864090018773596,204.143183925803,25.7461023418509,28.9644899204813,21.3070149683584,13.6060288707286,19.8681354781265,59.2563566133446,54.7928145817681,66.6378569657774,53.0399374318799,77.4345101850935,120.750314236553,95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|short_description=p1@Ccl5
}}
}}

Latest revision as of 20:12, 25 September 2015

Short description:p1@Ccl5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ccl5_5end
Coexpression cluster:MCL_coexpression_mm9:86
Association with transcript: 0bp_to_ENSMUST00000035938, ENSMUST00000125015, NM_013653, uc007kpi.2_5end
EntrezGene:Ccl5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ccl5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I513.26
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I66.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.93
CD326+ enterocyte, pool2.CNhs13197.11849-124I412.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.69
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.04
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E919.37
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E712.81
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.75
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.37
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.64
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E47.19
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.76
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A131.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A334.83
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A510.49
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2147.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4156.31
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6146.84
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A323.98
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21279.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9502.55
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D153.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D281.67
GP2+ M cell, pool1.CNhs13228.11845-124H912.63
GP2+ M cell, pool2.CNhs13231.11846-124I18.18
GP2+ M cell, pool3.CNhs13240.11847-124I211.42
Ileum epithelium, pool1.CNhs13199.10252-104B9283.51
Ileum epithelium, pool2.CNhs13232.10253-104C1534.81
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8552.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.33
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F616.46
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G85.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.19
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G95.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.15
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H44.37
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D831.73
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D923.42
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B314.68
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B714.87
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.62
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.36
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I960.21
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1516.91
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.83
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D19.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71946.03
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74075.12
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22234.46
Mouse Microglia, donor1.CNhs12629.11718-123C88.99
Mouse Microglia, donor2.CNhs12634.11736-123E89.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D95.68
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.51
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F719.79
Mouse hepatocyte, donor1.CNhs13078.11714-123C415.64
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A731.88
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.47
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H115.40
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I828.03
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.41
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.56
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B668.28
accessory axillary lymph node, adult.CNhs10475.1063-29H9852.42
adrenal gland, adult.CNhs10508.49-24D7114.45
adrenal gland, embryo E14.CNhs11038.406-44C51.91
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F52.86
adrenal gland, neonate N00.CNhs11191.1311-23C12.59
adrenal gland, neonate N25.CNhs11223.1377-27I34.78
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H138.03
bone (os femoris), adult.CNhs10483.56-12G272.54
bone (os femoris), neonate N02.CNhs11227.1985-43F51.29
bone (os femoris), neonate N16.CNhs11225.1525-43A66.18
bone (os femoris), neonate N20.CNhs11195.1350-25C39.21
cecum, adult.CNhs10467.37-13H429.82
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H7326.99
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C719.05
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D120.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D449.43
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A228.49
epididymis, adult.CNhs10490.58-23B215.16
eyeball, adult.CNhs10484.31-12G46.52
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C844.94
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D213.64
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D590.36
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G13.16
heart, neonate N20.CNhs11127.821-26I62.05
heart, neonate N25.CNhs11196.1351-25D38.34
heart, neonate N30.CNhs11202.1390-42D28.72
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I31040.16
intestine, adult.CNhs10496.178-9A359.77
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D81.42
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D32.22
intestine, embryo E18.CNhs10526.1289-20F73.04
intestine, neonate N00.CNhs11126.644-26D141.76
intestine, neonate N01.CNhs11192.1322-23E95.11
intestine, neonate N06.CNhs11102.688-20B816.34
intestine, neonate N07.CNhs11095.720-20F212.93
intestine, neonate N10.CNhs11098.755-23A515.99
intestine, neonate N20.CNhs11187.827-18D132.36
intestine, neonate N25.CNhs11121.1352-25E344.09
intestine, neonate N30.CNhs11131.1384-42G186.23
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D52.09
kidney, neonate N20.CNhs11113.832-19I13.84
kidney, neonate N25.CNhs11122.1353-25F35.34
kidney, neonate N30.CNhs11203.1385-42H14.44
liver, adult pregnant day01.CNhs10466.508-5B210.67
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A37.38
liver, embryo E18.CNhs10579.499-43G47.19
liver, neonate N00.CNhs11117.641-24F410.70
liver, neonate N03.CNhs11123.1345-25G227.73
liver, neonate N06.CNhs11101.684-20A827.32
liver, neonate N07.CNhs11103.716-20H262.89
liver, neonate N10.CNhs11115.751-24B963.66
liver, neonate N20.CNhs11220.823-25A320.96
liver, neonate N25.CNhs11198.1368-26H112.02
liver, neonate N30.CNhs11106.1382-42D113.99
lung, adult.CNhs10474.28-22B1327.01
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C62.93
lung, neonate N06.CNhs11212.683-20E529.48
lung, neonate N07.CNhs11111.715-19A329.01
lung, neonate N10.CNhs11219.750-23E622.80
lung, neonate N20.CNhs11109.822-18A487.83
lung, neonate N25.CNhs11119.1359-25C771.15
lung, neonate N30.CNhs11133.1394-42H279.99
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11201.81
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A18399.54
mammary gland, adult lactating day02.CNhs10480.595-22B657.54
mammary gland, adult pregnant day19.CNhs10476.588-5H266.78
medulla oblongata, adult.CNhs10477.17-12C23.53
medulla oblongata, neonate N30.CNhs11200.1396-42A31.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I712.35
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G625.74
pancreas, adult.CNhs10486.34-16E419.91
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I76.15
pancreas, neonate N00.CNhs11105.645-26G93.88
pancreas, neonate N01.CNhs11138.1531-43D73.64
pancreas, neonate N02.CNhs11139.1539-43D87.49
pancreas, neonate N16.CNhs11136.787-43B636.98
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H511.34
pituitary gland, adult.CNhs10493.21-1G86.13
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I77.04
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F813.89
skin, adult.CNhs10492.30-1C31.81
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H31.21
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I113.70
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G2309.79
spleen, embryo E16.CNhs11035.461-43C110.32
spleen, embryo E18.CNhs11011.1271-21F243.34
spleen, neonate N10.CNhs11116.752-24D137.30
spleen, neonate N20.CNhs11112.824-19H185.30
spleen, neonate N25.CNhs11099.1354-25G382.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C650.31
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C933.03
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D369.24
stomach, adult.CNhs10503.33-1H633.41
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A99.42
stomach, neonate N25.CNhs11104.1355-25E46.54
stomach, neonate N30.CNhs11134.1386-42I118.79
submandibular gland, adult.CNhs10469.59-29C165.86
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I42.34
testis, neonate N10.CNhs11204.763-44D91.47
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B5204.14
thymus, embryo E14.CNhs11041.402-44I425.75
thymus, embryo E15.CNhs11005.430-45I228.96
thymus, embryo E16.CNhs11002.456-26C521.31
thymus, embryo E17.CNhs10581.478-18C113.61
thymus, embryo E18.CNhs10595.1273-19G419.87
thymus, neonate N02.CNhs11181.1541-43F859.26
thymus, neonate N03.CNhs11137.2104-43C754.79
thymus, neonate N06.CNhs11197.681-26C466.64
thymus, neonate N07.CNhs11211.713-19D353.04
thymus, neonate N10.CNhs11194.748-24E477.43
thymus, neonate N20.CNhs11186.820-7A2120.75
thymus, neonate N25.CNhs11125.1362-25G795.54
thymus, neonate N30.CNhs11132.1393-42G294.67
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E415.46
uterus, adult pregnant day19.CNhs10497.590-15F521.77
uterus, adult.CNhs10509.92-27E522.71
vagina, adult.CNhs10502.89-27D56.86
vesicular gland, adult.CNhs10491.51-27F864.70
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D17.94
whole body, neonate N10.CNhs10518.761-6B412.06





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
connective tissue cell2.58e-0746
mesenchymal cell2.58e-0746

Uber anatomy
Ontology termp-valuen
hemolymphoid system1.54e-1748
immune system1.54e-1748
hematopoietic system8.80e-1645
blood island8.80e-1645
digestive system7.80e-15116
digestive tract7.80e-15116
primitive gut7.80e-15116
endoderm-derived structure8.51e-15118
endoderm8.51e-15118
presumptive endoderm8.51e-15118
subdivision of digestive tract6.67e-14114
bone marrow1.16e-0816
mixed endoderm/mesoderm-derived structure1.35e-0835
hemopoietic organ2.32e-0829
immune organ2.32e-0829
adult organism1.36e-0751
foregut1.62e-0780
lateral plate mesoderm2.26e-0787
connective tissue2.58e-0746
endo-epithelium3.16e-0769
bone element5.47e-0722
skeletal element5.47e-0722
skeletal system5.47e-0722
gut epithelium6.29e-0755
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