FFCP PHASE1:Mm9::chr12:103606458..103606468,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr12:103606458..103606468,+ to FFCP PHASE1:Mm9::chr12:103606458..103606468,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=285 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:103606458..103606468,+ | |||
|description=CAGE_peak_at_chr12:103606458..103606468,+ | |||
|id=chr12:103606458..103606468,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.67e-13,9;CL:0000789,1.67e-13,9;CL:0002420,1.67e-13,9;CL:0002419,1.67e-13,9;CL:0000790,1.67e-13,9;CL:0002031,2.73e-11,25;CL:0000084,5.09e-11,11;CL:0000827,5.09e-11,11;CL:0000624,3.76e-10,8;CL:0000838,4.37e-10,12;CL:0000738,8.50e-10,17;CL:0002087,8.50e-10,17;CL:0000542,2.70e-09,13;CL:0000051,2.70e-09,13;CL:0000988,1.34e-08,32;CL:0002032,1.34e-08,32;CL:0000037,1.34e-08,32;CL:0000837,1.34e-08,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.38e-14!29;UBERON:0002390!8.85e-14!45;UBERON:0003061!8.85e-14!45;UBERON:0002193!1.47e-13!48;UBERON:0002405!6.20e-11!70;UBERON:0002370!1.87e-10!23;UBERON:0000974!1.87e-10!23;UBERON:0004807!1.87e-10!23;UBERON:0005058!1.87e-10!23;UBERON:0003351!1.87e-10!23;UBERON:0009113!1.87e-10!23;UBERON:0003295!1.87e-10!23;UBERON:0009722!1.87e-10!23;UBERON:0005562!1.87e-10!23;UBERON:0007690!1.87e-10!23;UBERON:0005057!4.27e-10!51;UBERON:0006562!9.40e-10!24;UBERON:0003408!9.40e-10!24;UBERON:0001557!9.40e-10!24;UBERON:0001042!9.40e-10!24;UBERON:0008814!9.40e-10!24;UBERON:0009145!9.40e-10!24;UBERON:0000065!3.13e-09!41;UBERON:0001004!8.26e-09!42;UBERON:0000072!5.54e-08!27;UBERON:0001041!2.18e-07!92;UBERON:0000077!5.92e-07!97;UBERON:0003104!8.85e-07!131;UBERON:0009142!8.85e-07!131 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.55e-12,48;UBERON:0002405,3.55e-12,48;UBERON:0002390,8.35e-11,45;UBERON:0003061,8.35e-11,45;UBERON:0004177,2.87e-09,29;UBERON:0005057,2.87e-09,29;UBERON:0002370,2.98e-09,23;UBERON:0000974,2.98e-09,23;UBERON:0004807,2.98e-09,23;UBERON:0005058,2.98e-09,23;UBERON:0003351,2.98e-09,23;UBERON:0009113,2.98e-09,23;UBERON:0003295,2.98e-09,23;UBERON:0009722,2.98e-09,23;UBERON:0005562,2.98e-09,23;UBERON:0007690,2.98e-09,23;UBERON:0006562,7.78e-09,24;UBERON:0003408,7.78e-09,24;UBERON:0001557,7.78e-09,24;UBERON:0001042,7.78e-09,24;UBERON:0008814,7.78e-09,24;UBERON:0009145,7.78e-09,24;UBERON:0000072,9.02e-08,27;UBERON:0000077,1.65e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,3.61545305636414,0,0.234064526321993,0,0.0797721589953364,3.25281386869291,3.93391810885488,0.666219523631325,0.404950534779652,0,1.73504190947031,1.7824876368746,0.42438965179803,0.340173160604279,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,2.94115744015507,2.73218193983378,0,0,0,0,0,0,0,0,0,0,0,2.17608642603403,1.68046899571232,0,0.286533439938757,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,7.25026074212081,0.29688427812965,0.173485326766136,0.304465478312141,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0.255715457330331,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,0,0,0.330418782983798,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0.126473074248515,0.295220295959204,0.156998727841375,0,0,0,0,0,0,0.241177159752417,0,0,0.324270453550071,0.274561413188081,2.87536413054709,0,0.624075346229121,0.252578877947112,0.179397413521912,0,0.554259570499814,0,0.162964976442026,0,0,0,0,0.390267295715598,0.157635144106191,0,0.956728611944923,0.655453258862952,0.172684981865896,0.578596234326046,1.50791283939272,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.659880491890142,0,0,0,0,0,0,0,0,0,0.316036757935816,1.05418608574999,0,0,0,0.129358683782755,0,0,0,0,0.608929898229199,0,0,0,0,0.161464426695906,0,0,0,0.291480836629851,0,0.341741761595705,0.619160603889667,0.185194527369712,0.941842285023455,0.546776910884101,1.14389086603261,0.339956859987711,0.419854356970974,0.276399947608848,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0,0.234714477291508,0,0.104859344425711,0,0.288030006257865,1.58005560314089,0.608175645870493,1.02710957164827,1.16928740680016,0.716106782669926,0.596044064343795,0.240390899039938,0.738447635872886,0.302899349844443,0.914481679859998,0.705783295957884,1.55932609183604,2.21287235772758,0.935015217452552,0,0,0,0,0.386379188064381,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0,0,0.187283014939765,0.0640251524048693,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0,3.61545305636414,0,0.234064526321993,0,0.0797721589953364,3.25281386869291,3.93391810885488,0.666219523631325,0.404950534779652,0,1.73504190947031,1.7824876368746,0.42438965179803,0.340173160604279,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,2.94115744015507,2.73218193983378,0,0,0,0,0,0,0,0,0,0,0,2.17608642603403,1.68046899571232,0,0.286533439938757,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,7.25026074212081,0.29688427812965,0.173485326766136,0.304465478312141,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0.255715457330331,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,0,0,0.330418782983798,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0.126473074248515,0.295220295959204,0.156998727841375,0,0,0,0,0,0,0.241177159752417,0,0,0.324270453550071,0.274561413188081,2.87536413054709,0,0.624075346229121,0.252578877947112,0.179397413521912,0,0.554259570499814,0,0.162964976442026,0,0,0,0,0.390267295715598,0.157635144106191,0,0.956728611944923,0.655453258862952,0.172684981865896,0.578596234326046,1.50791283939272,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.659880491890142,0,0,0,0,0,0,0,0,0,0.316036757935816,1.05418608574999,0,0,0,0.129358683782755,0,0,0,0,0.608929898229199,0,0,0,0,0.161464426695906,0,0,0,0.291480836629851,0,0.341741761595705,0.619160603889667,0.185194527369712,0.941842285023455,0.546776910884101,1.14389086603261,0.339956859987711,0.419854356970974,0.276399947608848,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0,0.234714477291508,0,0.104859344425711,0,0.288030006257865,1.58005560314089,0.608175645870493,1.02710957164827,1.16928740680016,0.716106782669926,0.596044064343795,0.240390899039938,0.738447635872886,0.302899349844443,0.914481679859998,0.705783295957884,1.55932609183604,2.21287235772758,0.935015217452552,0,0,0,0,0.386379188064381,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0,0,0.187283014939765,0.0640251524048693,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | ||
|short_description=p@chr12:103606458..103606468,+ | |||
}} | }} |
Latest revision as of 14:31, 4 August 2015
Short description: | p@chr12:103606458..103606468, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:103606458..103606468, + |
Coexpression cluster: | MCL_coexpression_mm9:285 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.67e-13 | 9 |
alpha-beta T cell | 1.67e-13 | 9 |
immature T cell | 1.67e-13 | 9 |
mature T cell | 1.67e-13 | 9 |
immature alpha-beta T cell | 1.67e-13 | 9 |
hematopoietic lineage restricted progenitor cell | 2.73e-11 | 25 |
T cell | 5.09e-11 | 11 |
pro-T cell | 5.09e-11 | 11 |
CD4-positive, alpha-beta T cell | 3.76e-10 | 8 |
lymphoid lineage restricted progenitor cell | 4.37e-10 | 12 |
leukocyte | 8.50e-10 | 17 |
nongranular leukocyte | 8.50e-10 | 17 |
lymphocyte | 2.70e-09 | 13 |
common lymphoid progenitor | 2.70e-09 | 13 |
hematopoietic cell | 1.34e-08 | 32 |
hematopoietic oligopotent progenitor cell | 1.34e-08 | 32 |
hematopoietic stem cell | 1.34e-08 | 32 |
hematopoietic multipotent progenitor cell | 1.34e-08 | 32 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.55e-12 | 48 |
immune system | 3.55e-12 | 48 |
hematopoietic system | 8.35e-11 | 45 |
blood island | 8.35e-11 | 45 |
hemopoietic organ | 2.87e-09 | 29 |
immune organ | 2.87e-09 | 29 |
thymus | 2.98e-09 | 23 |
neck | 2.98e-09 | 23 |
respiratory system epithelium | 2.98e-09 | 23 |
hemolymphoid system gland | 2.98e-09 | 23 |
pharyngeal epithelium | 2.98e-09 | 23 |
thymic region | 2.98e-09 | 23 |
pharyngeal gland | 2.98e-09 | 23 |
entire pharyngeal arch endoderm | 2.98e-09 | 23 |
thymus primordium | 2.98e-09 | 23 |
early pharyngeal endoderm | 2.98e-09 | 23 |
pharynx | 7.78e-09 | 24 |
gland of gut | 7.78e-09 | 24 |
upper respiratory tract | 7.78e-09 | 24 |
chordate pharynx | 7.78e-09 | 24 |
pharyngeal arch system | 7.78e-09 | 24 |
pharyngeal region of foregut | 7.78e-09 | 24 |
segment of respiratory tract | 9.02e-08 | 27 |
mixed endoderm/mesoderm-derived structure | 1.65e-07 | 35 |