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FFCP PHASE1:Mm9::chr13:88961079..88961125,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr13:88961079..88961125,+
|DHSsupport=NA
|short_description=p1@Edil3
|DPIdataset=NA
|description=CAGE_peak_1_at_Edil3_5end
|association_with_transcript=0bp_to_ENSMUST00000081769,ENSMUST00000153974_5end
|EntrezGene=13612
|EntrezGene=13612
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=O35474
|UniProt=O35474
|association_with_transcript=0bp_to_ENSMUST00000081769,ENSMUST00000153974_5end
|cluster_id=chr13:88961079..88961125,+
|description=CAGE_peak_1_at_Edil3_5end
|id=chr13:88961079..88961125,+
|ontology_enrichment_celltype=CL:0000540!1.38e-13!33;CL:0000047!1.38e-13!33;CL:0000031!1.38e-13!33;CL:0000404!1.38e-13!33;CL:0000117!7.27e-13!23;CL:0000337!7.27e-13!23;CL:0002319!3.14e-12!43;CL:0000221!5.07e-12!44;CL:0000133!5.07e-12!44;CL:0000393!3.48e-10!39;CL:0000211!3.48e-10!39;CL:0000055!6.29e-09!50
|ontology_enrichment_celltype_v019_2=CL:0000540,3.11e-14,33;CL:0000047,3.11e-14,33;CL:0000031,3.11e-14,33;CL:0000404,3.11e-14,33;CL:0000117,1.80e-13,23;CL:0000337,1.80e-13,23;CL:0002319,9.95e-13,43;CL:0000221,1.64e-12,44;CL:0000133,1.64e-12,44;CL:0000393,8.08e-10,39;CL:0000211,8.08e-10,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.02e-29!75;UBERON:0001016!2.02e-29!75;UBERON:0001017!4.20e-29!73;UBERON:0005743!4.20e-29!73;UBERON:0004121!3.09e-25!102;UBERON:0000924!3.09e-25!102;UBERON:0006601!3.09e-25!102;UBERON:0002346!4.05e-24!71;UBERON:0003075!4.05e-24!71;UBERON:0007284!4.05e-24!71;UBERON:0001049!2.11e-23!52;UBERON:0005068!2.11e-23!52;UBERON:0006241!2.11e-23!52;UBERON:0007135!2.11e-23!52;UBERON:0000033!6.72e-23!63;UBERON:0000955!2.00e-22!50;UBERON:0006238!2.00e-22!50;UBERON:0002616!8.48e-22!49;UBERON:0003056!3.12e-20!49;UBERON:0003080!9.73e-18!40;UBERON:0002780!4.78e-17!39;UBERON:0001890!4.78e-17!39;UBERON:0006240!4.78e-17!39;UBERON:0002020!4.86e-17!34;UBERON:0002791!3.90e-14!29;UBERON:0003528!3.90e-14!29;UBERON:0001893!3.90e-14!29;UBERON:0000153!1.21e-10!94;UBERON:0000956!6.18e-10!21;UBERON:0001869!6.18e-10!21;UBERON:0000203!6.18e-10!21;UBERON:0007811!1.37e-09!86;UBERON:0002619!5.84e-08!17;UBERON:0002021!2.64e-07!10;UBERON:0000411!2.64e-07!10;UBERON:0001950!2.64e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.88e-31,75;UBERON:0001017,1.71e-30,73;UBERON:0004121,8.88e-28,95;UBERON:0000924,8.88e-28,95;UBERON:0006601,8.88e-28,95;UBERON:0002346,5.90e-27,64;UBERON:0003075,5.90e-27,64;UBERON:0007284,5.90e-27,64;UBERON:0000073,6.57e-26,54;UBERON:0001049,2.72e-24,52;UBERON:0005068,2.72e-24,52;UBERON:0006241,2.72e-24,52;UBERON:0007135,2.72e-24,52;UBERON:0010371,1.21e-22,73;UBERON:0003056,3.08e-21,49;UBERON:0000955,6.62e-21,47;UBERON:0006238,6.62e-21,47;UBERON:0002616,2.91e-20,46;UBERON:0003080,1.31e-18,40;UBERON:0002780,7.03e-18,39;UBERON:0001890,7.03e-18,39;UBERON:0006240,7.03e-18,39;UBERON:0002020,7.15e-18,34;UBERON:0010314,3.65e-17,92;UBERON:0003528,8.24e-15,29;UBERON:0002791,8.24e-15,29;UBERON:0001893,8.24e-15,29;UBERON:0000956,2.19e-10,21;UBERON:0001869,2.19e-10,21;UBERON:0000203,2.19e-10,21;UBERON:0002619,2.64e-08,17;UBERON:0002021,1.29e-07,10;UBERON:0000411,1.29e-07,10;UBERON:0001950,1.29e-07,10
|phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,14.2022294552287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.608261587317087,0.367093504323363,10.1710874765245,0.436050312760893,1.31811709640683,2.13872888981712,13.5786828976602,0,0.167782606057736,0,0,0,0.85960031981627,1.54701627683233,33.3822160418336,34.9134046319542,41.1990412279016,34.5621422710515,38.239676232779,0.449949858640699,3.9554654502679,1.4209602298922,18.5752068521411,4.99483796918021,34.1138824494891,32.9414489529325,35.3345935070322,56.8445458963569,53.2293183693389,17.1487118900936,8.81778333367775,25.7381260250806,194.905109368918,162.801356058614,153.299320189731,24.9265083810066,20.2187692361325,28.6502353806218,106.368722619526,72.5963766940867,94.123720630515,79.5497180778903,57.0910440004403,50.3278503728312,2.72614295999463,28.5660497203649,0.289864488701678,0,0,0,0,0,4.49422144421606,0.170430322578058,0.259786004602869,0.70667914902068,2.39433813620357,2.56652954828636,2.54805239706646,0,1.73192832808971,0.760079596425296,0.505524445014783,2.16949371466214,0.517875767294343,2.52351636410202,4.68410382268567,2.74018930480927,2.53677046981664,2.11011696773672,2.23418543557839,1.50799909595611,0,0.578397427679647,5.30766331169925,19.0884882937943,10.1587098491781,14.0613823409214,3.72783522436244,37.1831612204665,31.4170060220183,0.766371165625774,0.479260498023681,0.599902730993408,0.127070227073065,107.849260371472,100.650132620098,17.9685723521396,75.0921063230634,49.3530832647538,134.231076785476,84.6899393213695,1.73126918545538,13.31154585528,0,10.9429765060966,10.7999967659044,17.012755728077,20.3470206680045,16.2761203262572,12.7228253412983,10.6334387836425,8.05834831213668,34.1488449375501,0.646703978798527,9.8335161687266,14.0760899331159,15.1245055375027,13.6243152120543,13.5818344943645,12.1411460480687,8.95654200683219,0,0,0,19.4698226183372,10.3191466391682,7.38254451990161,6.15536312521547,3.34499193970586,1.23413690309903,1.39520366850245,1.60964040839772,0.350296027101508,0.16455984991348,0,0.243206428637567,0.292399974850665,0,0.134206418760372,83.2748196313944,32.4149528994746,0,0.793351699990633,10.4511242762265,9.28946687441754,9.27845721519072,8.47070803418039,10.229390016864,6.84812254005213,0.474529061544512,7.74085087202851,3.2673577144035,3.18330355265841,2.14460495831032,0.898819408654221,1.08069024937347,1.59313018603494,3.98302592001472,5.9409226557059,5.63538678365402,4.2766778847516,2.52138233317913,1.8936671370386,1.45444035385792,0.442830443938806,0.941992367048249,0.246794327843601,0,1.33476084572875,0.786235980452812,0.224862112384854,0,0,0.763877555344259,0,0.162135226775035,0,0,0.744281895337007,0,0,0,0,3.32555742299888,6.06372517665551,5.37784422258685,4.92260748748046,5.63256595892405,5.19269398069629,8.09348379012447,5.65887578787617,9.61574379047765,11.2946991720875,9.24837658213425,5.07976275618788,3.62638461918381,3.7608755231193,0,0,0,0,148.509295738708,109.475715277118,10.6557714494839,3.53459298086122,5.04813151066011,5.46614242015294,8.61693590931196,6.69112634267146,13.3679204449436,19.8153571552183,11.7395103485719,20.1656541958805,17.7879500075936,59.4444435380343,1.13552068166615,6.58842733568844,5.86393053672874,0.989820737835213,0,1.45668381692989,0.604647113929502,0.188605079755898,0.590603785761546,0.307435147943927,1.03371317267288,0,1.06949213515416,0,0,0,43.5762695364849,8.46287141947158,7.76152102696527,22.7197257133488,12.0591358876746,13.1992925025532,15.6321569572015,6.08929898229199,0.704015124191131,0,1.54369878638473,1.31909002353184,1.45317984026315,1.68876189798836,1.19372344003136,1.31312719796049,0.874442509889552,176.710312816016,0,2.47664241555867,1.66675074632741,0.188368457004691,0,0,0.169978429993855,0.559805809294632,0.552799895217695,0,6.95939185878498,7.5228202836934,6.04829908602087,7.10900206449194,5.02233896616208,2.15782954215713,2.14898984885873,1.04702376793612,1.55537967950151,0,0,3.13984746692355,3.97100377097034,3.11121901350476,1.54991788173277,1.35164900392623,0.58678619322877,0.2604087696879,0,0,0,0,1.82452693761148,0.924398614483445,0.25984164595559,0.179026695667481,0,0,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0,0.906921534460845,0.443971906748129,0.179427713218951,0.167884616364078,2.89784391048286,0.187682475451182,3.11357761254351,0.214368379079066,0,53.6514250486213,55.2390283808612,65.8829840455306,77.3339320546594,78.7844897736239,85.3595104050362,66.152205022717,78.3558893610144,87.0033425249673,79.7350880097803,6.33102820263478,14.7639203158381,16.7318933639051,13.8570828728928,10.0614318061432,10.1113929647508,13.1125569402953,10.5077879191836,17.6505565275498,12.8875577999537,14.4483200937437,11.3175804831646,10.3005658216871,9.92389862275474,9.13223956394251,8.57328644309533,10.429589335037,10.4170979050401,9.06588981767275,10.009526569139,15.7719856097291,9.9386451449229,11.2065009275241,14.2439488299682,11.387235030255,11.9306597127264,12.43910215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|phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,14.2022294552287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.608261587317087,0.367093504323363,10.1710874765245,0.436050312760893,1.31811709640683,2.13872888981712,13.5786828976602,0,0.167782606057736,0,0,0,0.85960031981627,1.54701627683233,33.3822160418336,34.9134046319542,41.1990412279016,34.5621422710515,38.239676232779,0.449949858640699,3.9554654502679,1.4209602298922,18.5752068521411,4.99483796918021,34.1138824494891,32.9414489529325,35.3345935070322,56.8445458963569,53.2293183693389,17.1487118900936,8.81778333367775,25.7381260250806,194.905109368918,162.801356058614,153.299320189731,24.9265083810066,20.2187692361325,28.6502353806218,106.368722619526,72.5963766940867,94.123720630515,79.5497180778903,57.0910440004403,50.3278503728312,2.72614295999463,28.5660497203649,0.289864488701678,0,0,0,0,0,4.49422144421606,0.170430322578058,0.259786004602869,0.70667914902068,2.39433813620357,2.56652954828636,2.54805239706646,0,1.73192832808971,0.760079596425296,0.505524445014783,2.16949371466214,0.517875767294343,2.52351636410202,4.68410382268567,2.74018930480927,2.53677046981664,2.11011696773672,2.23418543557839,1.50799909595611,0,0.578397427679647,5.30766331169925,19.0884882937943,10.1587098491781,14.0613823409214,3.72783522436244,37.1831612204665,31.4170060220183,0.766371165625774,0.479260498023681,0.599902730993408,0.127070227073065,107.849260371472,100.650132620098,17.9685723521396,75.0921063230634,49.3530832647538,134.231076785476,84.6899393213695,1.73126918545538,13.31154585528,0,10.9429765060966,10.7999967659044,17.012755728077,20.3470206680045,16.2761203262572,12.7228253412983,10.6334387836425,8.05834831213668,34.1488449375501,0.646703978798527,9.8335161687266,14.0760899331159,15.1245055375027,13.6243152120543,13.5818344943645,12.1411460480687,8.95654200683219,0,0,0,19.4698226183372,10.3191466391682,7.38254451990161,6.15536312521547,3.34499193970586,1.23413690309903,1.39520366850245,1.60964040839772,0.350296027101508,0.16455984991348,0,0.243206428637567,0.292399974850665,0,0.134206418760372,83.2748196313944,32.4149528994746,0,0.793351699990633,10.4511242762265,9.28946687441754,9.27845721519072,8.47070803418039,10.229390016864,6.84812254005213,0.474529061544512,7.74085087202851,3.2673577144035,3.18330355265841,2.14460495831032,0.898819408654221,1.08069024937347,1.59313018603494,3.98302592001472,5.9409226557059,5.63538678365402,4.2766778847516,2.52138233317913,1.8936671370386,1.45444035385792,0.442830443938806,0.941992367048249,0.246794327843601,0,1.33476084572875,0.786235980452812,0.224862112384854,0,0,0.763877555344259,0,0.162135226775035,0,0,0.744281895337007,0,0,0,0,3.32555742299888,6.06372517665551,5.37784422258685,4.92260748748046,5.63256595892405,5.19269398069629,8.09348379012447,5.65887578787617,9.61574379047765,11.2946991720875,9.24837658213425,5.07976275618788,3.62638461918381,3.7608755231193,0,0,0,0,148.509295738708,109.475715277118,10.6557714494839,3.53459298086122,5.04813151066011,5.46614242015294,8.61693590931196,6.69112634267146,13.3679204449436,19.8153571552183,11.7395103485719,20.1656541958805,17.7879500075936,59.4444435380343,1.13552068166615,6.58842733568844,5.86393053672874,0.989820737835213,0,1.45668381692989,0.604647113929502,0.188605079755898,0.590603785761546,0.307435147943927,1.03371317267288,0,1.06949213515416,0,0,0,43.5762695364849,8.46287141947158,7.76152102696527,22.7197257133488,12.0591358876746,13.1992925025532,15.6321569572015,6.08929898229199,0.704015124191131,0,1.54369878638473,1.31909002353184,1.45317984026315,1.68876189798836,1.19372344003136,1.31312719796049,0.874442509889552,176.710312816016,0,2.47664241555867,1.66675074632741,0.188368457004691,0,0,0.169978429993855,0.559805809294632,0.552799895217695,0,6.95939185878498,7.5228202836934,6.04829908602087,7.10900206449194,5.02233896616208,2.15782954215713,2.14898984885873,1.04702376793612,1.55537967950151,0,0,3.13984746692355,3.97100377097034,3.11121901350476,1.54991788173277,1.35164900392623,0.58678619322877,0.2604087696879,0,0,0,0,1.82452693761148,0.924398614483445,0.25984164595559,0.179026695667481,0,0,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0,0.906921534460845,0.443971906748129,0.179427713218951,0.167884616364078,2.89784391048286,0.187682475451182,3.11357761254351,0.214368379079066,0,53.6514250486213,55.2390283808612,65.8829840455306,77.3339320546594,78.7844897736239,85.3595104050362,66.152205022717,78.3558893610144,87.0033425249673,79.7350880097803,6.33102820263478,14.7639203158381,16.7318933639051,13.8570828728928,10.0614318061432,10.1113929647508,13.1125569402953,10.5077879191836,17.6505565275498,12.8875577999537,14.4483200937437,11.3175804831646,10.3005658216871,9.92389862275474,9.13223956394251,8.57328644309533,10.429589335037,10.4170979050401,9.06588981767275,10.009526569139,15.7719856097291,9.9386451449229,11.2065009275241,14.2439488299682,11.387235030255,11.9306597127264,12.43910215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|short_description=p1@Edil3
}}
}}

Latest revision as of 23:50, 1 October 2015

Short description:p1@Edil3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Edil3_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000081769, ENSMUST00000153974_5end
EntrezGene:Edil3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Edil3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A314.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.17
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C413.58
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C333.38
Mouse Granule cells, donor2.CNhs12357.11731-123E334.91
Mouse Granule cells, donor3.CNhs12108.11636-122C741.20
Mouse Meningeal cells, donor1.CNhs12132.11716-123C634.56
Mouse Meningeal cells, donor3.CNhs12109.11639-122D138.24
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C818.58
Mouse Microglia, donor2.CNhs12634.11736-123E84.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D534.11
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F532.94
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D935.33
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F156.84
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D553.23
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D217.15
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.82
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D625.74
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3194.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3162.80
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7153.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D424.93
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F420.22
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D828.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4106.37
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E572.60
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I694.12
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D679.55
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F657.09
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E150.33
Mouse Schwann, donor1.CNhs12507.11728-123D92.73
Mouse Schwann, donor2.CNhs12573.11746-123F928.57
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.49
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.39
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.73
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.17
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D72.52
adrenal gland, embryo E14.CNhs11038.406-44C54.68
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F52.11
adrenal gland, neonate N00.CNhs11191.1311-23C12.23
adrenal gland, neonate N25.CNhs11223.1377-27I31.51
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F519.09
bone (os femoris), neonate N16.CNhs11225.1525-43A610.16
bone (os femoris), neonate N20.CNhs11195.1350-25C314.06
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B237.18
cerebellum, neonate N30.CNhs11135.1395-42I231.42
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A4107.85
corpus striatum, adult.CNhs10487.19-21D8100.65
corpus striatum, neonate N00.CNhs11226.630-43F117.97
cortex, adult.CNhs10473.12-14D575.09
cortex, neonate N30.CNhs11107.1392-42F249.35
diencephalon, adult.CNhs10482.20-12F2134.23
diencephalon, neonate N30.CNhs11201.1388-42B284.69
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.73
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A213.31
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G410.94
eyeball, embryo E12.CNhs11016.345-16C610.80
eyeball, embryo E14.CNhs10521.399-16E217.01
eyeball, embryo E15.CNhs10593.426-16C920.35
eyeball, embryo E17.CNhs11023.1261-18D416.28
eyeball, neonate N00.CNhs11207.633-15C612.72
eyeball, neonate N01.CNhs11140.1532-43E710.63
eyeball, neonate N02.CNhs11205.1551-44G88.06
eyeball, neonate N16.CNhs11188.777-19A234.15
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H29.83
forelimb, embryo E13.CNhs10589.384-1E214.08
forelimb, embryo E14.CNhs10577.413-26A815.12
forelimb, embryo E15.CNhs11007.437-20E713.62
forelimb, embryo E17.CNhs10598.1517-43C413.58
forelimb, embryo E18.CNhs11008.1520-43B512.14
gonad, embryo E13.CNhs11044.1564-45I68.96
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E919.47
heart, embryo E12.CNhs11015.353-12F510.32
heart, embryo E13.CNhs11013.376-3I97.38
heart, embryo E14.CNhs10597.403-26D46.16
heart, embryo E15.CNhs11017.431-16C83.34
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E883.27
hippocampus, neonate N00.CNhs11228.627-43G132.41
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I510.45
intestine, embryo E13.CNhs11010.381-16D59.29
intestine, embryo E15.CNhs10602.976-16D89.28
intestine, embryo E16.CNhs10585.463-22H48.47
intestine, embryo E17.CNhs10582.482-18D310.23
intestine, embryo E18.CNhs10526.1289-20F76.85
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E97.74
intestine, neonate N06.CNhs11102.688-20B83.27
intestine, neonate N07.CNhs11095.720-20F23.18
intestine, neonate N10.CNhs11098.755-23A52.14
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G11.59
kidney, embryo E14.CNhs10606.411-4I93.98
kidney, embryo E15.CNhs10997.434-16F85.94
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I24.28
kidney, embryo E18.CNhs11001.1288-20C72.52
kidney, neonate N00.CNhs11214.646-21G71.89
kidney, neonate N10.CNhs11206.758-6D51.45
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B13.33
lung, embryo E12.CNhs10522.354-16G26.06
lung, embryo E14.CNhs10604.404-26F85.38
lung, embryo E15.CNhs11020.432-17C54.92
lung, embryo E16.CNhs10998.458-17B65.63
lung, embryo E17.CNhs10605.480-44A65.19
lung, embryo E18.CNhs10583.1287-20I68.09
lung, neonate N00.CNhs11224.640-42C65.66
lung, neonate N06.CNhs11212.683-20E59.62
lung, neonate N07.CNhs11111.715-19A311.29
lung, neonate N10.CNhs11219.750-23E69.25
lung, neonate N20.CNhs11109.822-18A45.08
lung, neonate N25.CNhs11119.1359-25C73.63
lung, neonate N30.CNhs11133.1394-42H23.76
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C2148.51
medulla oblongata, neonate N30.CNhs11200.1396-42A3109.48
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C710.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.53
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.05
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.47
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E38.62
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.69
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D813.37
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D919.82
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D411.74
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D520.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D617.79
olfactory brain, adult.CNhs10489.18-22I959.44
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H76.59
ovary, neonate N00.CNhs11217.1299-22I45.86
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G843.58
pituitary gland, embryo E12.CNhs11018.346-16E68.46
pituitary gland, embryo E13.CNhs11009.370-44C77.76
pituitary gland, embryo E14.CNhs11037.398-44A522.72
pituitary gland, embryo E15.CNhs10592.427-16B912.06
pituitary gland, embryo E16.CNhs11036.449-43F613.20
pituitary gland, embryo E17.CNhs11039.1265-44F515.63
pituitary gland, neonate N00.CNhs11190.1308-22E96.09
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H31.69
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C9176.71
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C12.48
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E36.96
stomach, embryo E15.CNhs10603.1252-16G87.52
stomach, embryo E16.CNhs11022.459-17D46.05
stomach, embryo E17.CNhs11006.1035-18D57.11
stomach, embryo E18.CNhs10999.1286-20C65.02
stomach, neonate N03.CNhs11193.1340-24B82.16
stomach, neonate N07.CNhs11210.718-18A92.15
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I11.56
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F53.14
testis, embryo E15.CNhs11034.443-27C53.97
testis, embryo E16.CNhs11033.470-26G53.11
testis, embryo E17.CNhs11029.486-18I51.55
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.82
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E42.90
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E53.11
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A153.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A255.24
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A365.88
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D777.33
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A478.78
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A585.36
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A666.15
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A778.36
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A887.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A979.74
whole body, embryo E11.CNhs11014.324-5I86.33
whole body, embryo E12.CNhs10587.857-27C914.76
whole body, embryo E13.CNhs10512.372-23H216.73
whole body, embryo E14.5.CNhs10578.420-27D213.86
whole body, embryo E14.CNhs10519.395-14B110.06
whole body, embryo E16.CNhs10514.453-14F210.11
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G513.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G510.51
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G517.65
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G512.89
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G514.45
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G511.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.30
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.92
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.13
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G510.43
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G510.42
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.07
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G510.01
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G515.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G59.94
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G511.21
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G514.24
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.39
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G511.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G512.44
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G511.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G510.32
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G517.96
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G510.56
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G510.24
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G58.59
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G510.07
whole body, embryo E17.5.CNhs10513.490-9F914.47
whole body, embryo E17.CNhs10517.475-3I524.98
whole body, embryo E18.CNhs10516.493-3B312.40
whole body, neonate N00.CNhs10525.657-19C211.60
whole body, neonate N01.CNhs10576.659-23C618.75
whole body, neonate N06.CNhs10515.692-21D112.35
whole body, neonate N10.CNhs10518.761-6B411.13





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron3.11e-1433
neuronal stem cell3.11e-1433
neuroblast3.11e-1433
electrically signaling cell3.11e-1433
CNS neuron (sensu Vertebrata)1.80e-1323
neuroblast (sensu Vertebrata)1.80e-1323
neural cell9.95e-1343
ectodermal cell1.64e-1244
neurectodermal cell1.64e-1244
electrically responsive cell8.08e-1039
electrically active cell8.08e-1039

Uber anatomy
Ontology termp-valuen
nervous system7.88e-3175
central nervous system1.71e-3073
ectoderm-derived structure8.88e-2895
ectoderm8.88e-2895
presumptive ectoderm8.88e-2895
neurectoderm5.90e-2764
neural plate5.90e-2764
presumptive neural plate5.90e-2764
regional part of nervous system6.57e-2654
neural tube2.72e-2452
neural rod2.72e-2452
future spinal cord2.72e-2452
neural keel2.72e-2452
ecto-epithelium1.21e-2273
pre-chordal neural plate3.08e-2149
brain6.62e-2147
future brain6.62e-2147
regional part of brain2.91e-2046
anterior neural tube1.31e-1840
regional part of forebrain7.03e-1839
forebrain7.03e-1839
future forebrain7.03e-1839
gray matter7.15e-1834
structure with developmental contribution from neural crest3.65e-1792
brain grey matter8.24e-1529
regional part of telencephalon8.24e-1529
telencephalon8.24e-1529
cerebral cortex2.19e-1021
cerebral hemisphere2.19e-1021
pallium2.19e-1021
regional part of cerebral cortex2.64e-0817
occipital lobe1.29e-0710
visual cortex1.29e-0710
neocortex1.29e-0710
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