FFCP PHASE1:Mm9::chr14:31292806..31292871,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr14:31292806..31292871,+ to FFCP PHASE1:Mm9::chr14:31292806..31292871,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=75901 | |EntrezGene=75901 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=585 | |||
|TSSclassifier=NA | |||
|UniProt=Q91YD3 | |UniProt=Q91YD3 | ||
|association_with_transcript=55bp_to_ENSMUST00000022535,NM_133761,uc007suz.1,uc007sva.1,uc007svb.1_5end | |||
|cluster_id=chr14:31292806..31292871,+ | |||
|description=CAGE_peak_1_at_Dcp1a_5end | |||
|id=chr14:31292806..31292871,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!8.29e-09!193;UBERON:0004120!8.29e-09!193;UBERON:0006603!8.29e-09!193;UBERON:0000065!2.13e-08!41;UBERON:0001004!3.30e-08!42;UBERON:0001048!3.51e-08!147;UBERON:0002370!2.41e-07!23;UBERON:0000974!2.41e-07!23;UBERON:0004807!2.41e-07!23;UBERON:0005058!2.41e-07!23;UBERON:0003351!2.41e-07!23;UBERON:0009113!2.41e-07!23;UBERON:0003295!2.41e-07!23;UBERON:0009722!2.41e-07!23;UBERON:0005562!2.41e-07!23;UBERON:0007690!2.41e-07!23;UBERON:0004177!3.25e-07!29;UBERON:0003408!4.61e-07!24;UBERON:0006562!6.08e-07!24;UBERON:0001557!6.08e-07!24;UBERON:0001042!6.08e-07!24;UBERON:0008814!6.08e-07!24;UBERON:0009145!6.08e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,3.43e-11,43;UBERON:0000926,6.56e-09,120;UBERON:0004120,6.56e-09,120;UBERON:0006603,6.56e-09,120;UBERON:0000065,2.13e-08,41;UBERON:0001004,3.30e-08,42;UBERON:0007811,3.76e-08,36;UBERON:0001048,5.26e-08,134;UBERON:0002370,2.41e-07,23;UBERON:0000974,2.41e-07,23;UBERON:0004807,2.41e-07,23;UBERON:0005058,2.41e-07,23;UBERON:0003351,2.41e-07,23;UBERON:0009113,2.41e-07,23;UBERON:0003295,2.41e-07,23;UBERON:0009722,2.41e-07,23;UBERON:0005562,2.41e-07,23;UBERON:0007690,2.41e-07,23;UBERON:0004177,3.25e-07,29;UBERON:0005057,3.25e-07,29;UBERON:0003408,4.61e-07,24;UBERON:0006562,6.08e-07,24;UBERON:0001557,6.08e-07,24;UBERON:0001042,6.08e-07,24;UBERON:0008814,6.08e-07,24;UBERON:0009145,6.08e-07,24;UBERON:0000077,9.99e-07,35 | |||
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| |phase1_expression=19.5381593467849,8.37540978334467,8.64498554840118,8.77146212789807,7.51343594919521,8.05820505177071,7.47560449905682,22.5965816022758,24.6380263765417,24.8108397901313,22.6007718057667,25.5270908785077,23.7969014604376,24.2154514700623,9.66018309265422,10.5287139042709,9.79386629379405,24.4483178152634,22.3496526777354,20.7950929381035,16.2432684188543,17.276625508954,14.6271881917804,9.75953779039781,9.40578052375397,7.46501553349526,3.01533397311352,4.74036711908956,7.41091335879858,9.32511480111744,8.42575940490158,15.8757668364908,19.0670084151217,0,8.66554859253824,5.31950865147176,7.55426618170766,19.2524550138978,12.5013655123808,24.0820922227947,12.3528612486513,15.0270006690858,13.1087795318411,13.7227531593379,13.0776241273174,13.3989129078028,10.9534788208725,8.28495594245697,5.93152693383074,8.1660557611199,7.8392396110203,12.9377307928474,22.9862170299099,33.3666585325218,33.9454737133889,11.5766746216176,7.73640287834643,9.28209766099396,15.7806839470486,10.5798195854407,11.4089652631112,7.11573517345177,8.00365316500025,4.94944844504769,5.93319817540185,2.8419204597844,8.08920298399693,5.76327457982332,17.3161652555158,14.4456354014909,14.302097371894,7.9982275633065,13.2521124570968,14.6988959057945,19.7441670297567,10.1114066527102,3.30347642998166,11.8749224419225,11.6740965274745,16.0901271030836,19.3038928001084,11.9810075228055,9.49222196604695,13.5063026407603,10.5430790965999,11.7851434189467,14.0947963991112,13.6071595452469,12.0404647399763,13.5273092591146,15.0729534124872,6.88339101585109,12.2394840067395,6.47643829965381,5.84798775702902,6.2723764193627,11.0951091904084,16.8726019352277,10.9110121933205,6.71345191569646,16.760366953425,14.115912515575,10.1922095882658,0,10.8245520505607,8.10751569520315,5.05524445014783,11.8751234907822,41.6889992671946,22.1178787206589,14.9197381018877,18.2679286987285,17.7573932887165,17.182381022999,24.2232736699552,16.4623234641875,14.3373081285937,19.665512541108,13.2691582792481,17.9561203441624,14.575540218386,13.091631834651,0,16.9812862266697,19.4785437336513,11.4955674843866,18.3317140494058,16.197373736822,22.2372897377863,16.1773890557209,11.8950156732843,16.8376831831238,20.5112697826886,14.8314965251592,12.6750707181332,13.1415423084884,23.1175355940218,18.1634177090736,22.492325500597,15.5726973355991,27.1951725792051,13.7941262660084,18.546399369951,21.4000841326715,25.0374316876887,23.060469651273,21.1765897504987,21.4723797713383,33.6286068975234,26.8530633838303,26.7445708729202,20.1660073833369,31.141291913267,22.2881386574187,27.1632420058485,24.8792833523116,13.3420505589515,21.6172241976361,19.6072814582959,19.4698226183372,20.1692411583743,20.1669508836337,20.3600472603281,16.7249596985293,18.2035193207106,19.7653853037847,14.7550370769791,18.5656894363799,18.4307031903098,18.2225885127796,17.9162069096341,10.9649990568999,15.1489579550825,13.2864354572768,15.5614561937454,18.7286394530298,12.5559137533843,13.7514294665043,26.447743066369,24.1526138734856,24.2270827285535,17.3447831176075,17.3454874198999,13.1255682017666,13.2868137232463,15.317002789333,12.5667604400135,15.7175612912509,15.0122347081723,19.7740269903929,11.4553166433588,12.5459002150251,23.8981555200883,23.9921876480431,22.5415471346161,24.2345080135924,17.6496763322539,23.3552280234761,23.2710456617267,15.941895981797,16.6418651511857,13.6970851953199,5.33614728756868,17.0182007830416,15.3316016188298,16.4149342040943,11.9687471619217,17.1235783424216,7.89340140522401,11.5078454980324,13.2950885955529,8.23684239564244,14.3768206527355,16.3742016974142,16.5379966750717,9.59799736199025,7.53469136792031,9.16642690590398,17.3667998756608,16.4857528240322,28.0299759480285,26.140743209379,23.7037150771387,23.7858885567378,21.4239276797412,22.4403695036469,27.9014205067958,28.568944964692,25.5127629851979,19.6635977658886,21.0675677876393,16.9239398540369,15.0791283939272,11.9659250440116,12.7858710984949,17.1080782708934,11.0779907091576,13.3621322715112,15.9016897015375,16.1581393410799,11.6738041184015,14.8366722832723,11.4174400798383,11.4705023017225,15.5959071857676,14.1538265394416,12.1443210502468,12.8592577480977,15.0209355619679,17.3513510867776,24.1298144854057,20.4775444217344,30.1340874804116,21.7760562323747,7.96470830039777,19.4224508923985,16.6277956330613,16.7858520982749,11.5167738223501,17.2163682848599,20.9326917466259,18.9037539328303,15.329387270543,15.8018378967908,12.6502330289999,18.5643977846736,19.4050575279659,20.7070258136007,16.5579115241926,22.076714608254,25.1823131772028,23.0095774706671,22.0495687606842,14.6143175575008,18.5390649370331,18.6412222360162,10.3648347085832,17.1481703059139,23.896735150994,26.7789386681012,20.8901602005489,23.3080077637987,14.5740418314925,12.6089205367147,14.6948957486153,17.7492706448371,23.8900940306928,19.5903195284879,22.4178533462481,12.8115776995653,29.406268388937,28.2701933693789,31.9241939488219,12.4107180341965,25.7813834768625,23.9916971209681,22.5731162317565,18.1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| ||
|short_description=p1@Dcp1a | |||
}} | }} |
Latest revision as of 20:47, 25 September 2015
Short description: | p1@Dcp1a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dcp1a_5end |
Coexpression cluster: | MCL_coexpression_mm9:585 |
Association with transcript: | 55bp_to_ENSMUST00000022535, NM_133761, uc007suz.1, uc007sva.1, uc007svb.1_5end |
EntrezGene: | Dcp1a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anterior region of body | 3.43e-11 | 43 |
mesoderm | 6.56e-09 | 120 |
mesoderm-derived structure | 6.56e-09 | 120 |
presumptive mesoderm | 6.56e-09 | 120 |
respiratory tract | 2.13e-08 | 41 |
respiratory system | 3.30e-08 | 42 |
craniocervical region | 3.76e-08 | 36 |
primordium | 5.26e-08 | 134 |
thymus | 2.41e-07 | 23 |
neck | 2.41e-07 | 23 |
respiratory system epithelium | 2.41e-07 | 23 |
hemolymphoid system gland | 2.41e-07 | 23 |
pharyngeal epithelium | 2.41e-07 | 23 |
thymic region | 2.41e-07 | 23 |
pharyngeal gland | 2.41e-07 | 23 |
entire pharyngeal arch endoderm | 2.41e-07 | 23 |
thymus primordium | 2.41e-07 | 23 |
early pharyngeal endoderm | 2.41e-07 | 23 |
hemopoietic organ | 3.25e-07 | 29 |
immune organ | 3.25e-07 | 29 |
gland of gut | 4.61e-07 | 24 |
pharynx | 6.08e-07 | 24 |
upper respiratory tract | 6.08e-07 | 24 |
chordate pharynx | 6.08e-07 | 24 |
pharyngeal arch system | 6.08e-07 | 24 |
pharyngeal region of foregut | 6.08e-07 | 24 |
mixed endoderm/mesoderm-derived structure | 9.99e-07 | 35 |