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(Created page with "{{f5samples |id=FF:12242-129H1 |name=Basophils, donor2 (heparinase treated) |sample_id=12242 |rna_tube_id=129H1 |rna_box=129 |rna_position=H1 |sample_cell_lot=lot:BASO7...")
 
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{{f5samples
{{f5samples
|id=FF:12242-129H1
|DRA_sample_Accession=CAGE@SAMD00004913
|name=Basophils, donor2 (heparinase treated)
|accession_numbers=CAGE;DRX008046;DRR008918;DRZ000343;DRZ001728;DRZ011693;DRZ013078
|sample_id=12242
|ancestors_in_anatomy_facet=
|rna_tube_id=129H1
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000766,CL:0000081,CL:0000219,CL:0000738,CL:0000255,CL:0000094,CL:0000767
|rna_box=129
|rna_position=H1
|sample_cell_lot=lot:BASO744
|sample_cell_catalog=N/A
|sample_company=3HBiomedical
|rna_lot_number=
|rna_catalog_number=3H100-93-5
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_dev_stage=
|sample_tissue=blood
|sample_donor(cell lot)=
|sample_sex=
|sample_age=
|sample_ethnicity=
|rna_rin=9.40000
|rna_od260/230=1.14000
|rna_od260/280=2.02000
|sample_cell_type=basophil
|sample_cell_line=
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0
|rna_weight_ug=1.62792
|rna_concentration=0.13566
|sample_note=
|profile_hcage=CNhs12563,LSID921,release011,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000048,CL:0000049,CL:0000063,CL:0000081,CL:0000094,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000548,CL:0000566,CL:0000723,CL:0000738,CL:0000763,CL:0000766,CL:0000767,CL:0000837,CL:0000988,CL:0002032,CL:0002320,CL:0002371
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000465,UBERON:0000479,UBERON:0001062,UBERON:0002384
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|sample_description=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000013,FF:0000212
 
|comment=
|created_by=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|expression_enrichment_score=chr2:68592406..68592424,+!p1@PLEK!2.58!376.15!PLEK;;chr19:45971246..45971265,+!p1@FOSB!2.17!2573.19!FOSB;;chr12:54778471..54778528,-!p1@ZNF385A!2.12!131.65!ZNF385A;;chr11:47400078..47400106,-!p1@SPI1!2.10!123.98!SPI1;;chr1:25256756..25256774,-!p1@RUNX3!2.02!190.76!RUNX3;;chr16:85932760..85932775,+!p1@IRF8!1.98!94.04!IRF8;;chr2:157189180..157189290,-!p1@NR4A2!1.96!445.24!NR4A2;;chr17:45810594..45810608,+!p1@TBX21!1.94!85.98!TBX21;;chr2:192015701..192015743,-!p1@STAT4!1.90!105.17!STAT4;;chr19:54041669..54041697,+!p2@ZNF331!1.83!66.02!ZNF331;;chr2:145277640..145277771,-!p1@ZEB2!1.79!772.65!ZEB2;;chr10:35484053..35484076,+!p1@CREM!1.78!142.02!CREM;;chr20:39317868..39317884,-!p1@MAFB!1.76!631.78!MAFB;;chr2:61108878..61108891,+!p5@REL!1.72!51.82!REL;;chr19:54058073..54058088,+!p1@ZNF331!1.68!46.83!ZNF331;;chr14:75745523..75745537,+!p1@FOS!1.67!5146.77!FOS;;chr6:106546808..106546833,+!p3@PRDM1!1.66!55.66!PRDM1;;chr20:56195474..56195506,-!p1@ZBP1!1.62!40.30!ZBP1;;chr7:50343634..50343717,+!p2@IKZF1!1.61!39.53!IKZF1;;chr10:8096772..8096787,+!p2@GATA3!1.60!46.06!GATA3;;chr9:102584262..102584276,+!p1@NR4A3!1.59!81.76!NR4A3;;chr11:47400062..47400077,-!p2@SPI1!1.58!36.85!SPI1;;chr2:145271342..145271377,-!p5@ZEB2!1.58!36.85!ZEB2;;chr9:3525727..3525828,-!p2@RFX3!1.56!88.66!RFX3;;chrY:21906594..21906622,-!p1@KDM5D!1.55!34.16!KDM5D;;chr9:117150254..117150271,-!p1@AKNA!1.54!89.82!AKNA;;chr2:231090433..231090469,+!p1@SP140!1.53!32.63!SP140;;chr15:60884706..60884743,-!p1@RORA!1.51!156.22!RORA;;chr20:50159198..50159299,-!p1@NFATC2!1.48!41.84!NFATC2;;chr21:36421347..36421380,-!p8@RUNX1!1.48!29.17!RUNX1;;chr6:391743..391759,+!p1@IRF4!1.47!28.40!IRF4;;chr19:16435625..16435682,+!p1@KLF2!1.46!862.08!KLF2;;chr9:110252035..110252057,-!p1@KLF4!1.46!423.75!KLF4;;chr3:63953435..63953499,+!p1@ATXN7!1.46!28.02!ATXN7;;chrX:106960180..106960197,-!p2@TSC22D3!1.43!96.34!TSC22D3;;chr2:68592394..68592405,+!p2@PLEK!1.42!25.33!PLEK;;chr7:50344289..50344323,+!p1@IKZF1!1.41!24.57!IKZF1;;chr11:47399947..47399961,-!p3@SPI1!1.41!24.57!SPI1;;chr2:61108808..61108821,+!p3@REL!1.40!29.94!REL;;chr2:192015750..192015793,-!p2@STAT4!1.39!31.47!STAT4;;chr2:231090471..231090504,+!p2@SP140!1.38!23.03!SP140;;chr17:38020392..38020477,-!p1@IKZF3!1.38!23.03!IKZF3;;chr12:54778351..54778378,-!p6@ZNF385A!1.37!22.26!ZNF385A;;chr1:26697243..26697258,-!p1@ZNF683!1.37!22.26!ZNF683;;chr5:142782823..142782854,-!p3@NR3C1!1.36!30.71!NR3C1;;chr4:57522166..57522260,-!p2@HOPX!1.36!24.95!HOPX;;chr10:35484090..35484104,+!p6@CREM!1.35!21.49!CREM;;chrX:106960221..106960236,-!p3@TSC22D3!1.34!57.19!TSC22D3;;chr3:39195075..39195088,-!p1@CSRNP1!1.33!123.98!CSRNP1;;chr14:35872962..35873025,-!p3@NFKBIA!1.33!51.05!NFKBIA;;chr10:3824332..3824425,-!p4@KLF6!1.33!32.24!KLF6;;chr2:61108695..61108753,+!p1@REL!1.32!134.34!REL;;chr8:67525443..67525459,-!p2@MYBL1!1.32!29.17!MYBL1;;chr14:35873947..35873965,-!p1@NFKBIA!1.31!1180.28!NFKBIA;;chrX:106960285..106960299,-!p1@TSC22D3!1.31!498.59!TSC22D3;;chr13:41593425..41593480,-!p1@ELF1!1.31!120.52!ELF1;;chr12:72056800..72056834,+!p1@THAP2!1.31!26.10!THAP2;;chr11:67007611..67007622,+!p6@KDM2A!1.29!24.57!KDM2A;;chr7:115670804..115670825,-!p1@TFEC!1.29!18.42!TFEC;;chr5:131826457..131826514,-!p1@IRF1!1.28!679.76!IRF1;;chr10:3827371..3827386,-!p2@KLF6!1.28!149.69!KLF6;;chr6:15246261..15246312,+!p1@JARID2!1.26!404.56!JARID2;;chr7:104654690..104654704,+!p2@MLL5!1.26!33.78!MLL5;;chr4:83822199..83822239,+!p2@THAP9!1.26!20.73!THAP9;;chr1:26697189..26697205,-!p2@ZNF683!1.25!16.89!ZNF683;;chr12:57914286..57914304,-!p1@DDIT3!1.24!575.36!DDIT3;;chr21:36260295..36260310,-!p3@RUNX1!1.24!26.48!RUNX1;;chr13:74707894..74707947,-!p6@KLF12!1.24!18.42!KLF12;;chr6:106546834..106546850,+!p4@PRDM1!1.24!16.50!PRDM1;;chr9:102584241..102584261,+!p4@NR4A3!1.23!24.57!NR4A3;;chr1:156470515..156470542,-!p2@MEF2D!1.22!80.22!MEF2D;;chr18:46475696..46475713,-!p1@SMAD7!1.22!17.66!SMAD7;;chr6:106546786..106546802,+!p6@PRDM1!1.21!15.35!PRDM1;;chr13:41593392..41593403,-!p7@ELF1!1.21!15.35!ELF1;;chr3:23986824..23986848,+!p2@NR1D2!1.20!81.37!NR1D2;;chr3:5020939..5020952,+!p2@BHLHE40!1.20!46.06!BHLHE40;;chr6:15246200..15246214,+!p2@JARID2!1.20!40.69!JARID2;;chr3:39195139..39195150,-!p3@CSRNP1!1.20!18.81!CSRNP1;;chr16:31885093..31885165,+!p1@ZNF267!1.19!218.78!ZNF267;;chr7:104654718..104654741,+!p3@MLL5!1.19!21.11!MLL5;;chr17:37934365..37934387,-!p2@IKZF3!1.19!14.59!IKZF3;;chr4:106068026..106068084,+!p1@TET2!1.18!124.74!TET2;;chr7:50344251..50344288,+!p3@IKZF1!1.18!14.20!IKZF1;;chr11:47399996..47400014,-!p4@SPI1!1.18!14.20!SPI1;;chr12:72056749..72056767,+!p6@THAP2!1.17!15.35!THAP2;;chr13:41593405..41593416,-!p9@ELF1!1.17!13.82!ELF1;;chrY:2803415..2803468,+!p1@ZFY!1.17!13.82!ZFY;;chr7:50343895..50343936,+!p5@IKZF1!1.16!13.43!IKZF1;;chr2:70142232..70142251,+!p1@MXD1!1.15!72.93!MXD1;;chr12:72056773..72056796,+!p3@THAP2!1.15!16.89!THAP2;;chr7:137620684..137620711,-!p4@CREB3L2!1.15!13.05!CREB3L2;;chr8:60031619..60031676,-!p1@TOX!1.14!28.02!TOX;;chr9:102584278..102584285,+!p5@NR4A3!1.14!12.67!NR4A3;;chr19:54041645..54041661,+!p5@ZNF331!1.14!12.67!ZNF331;;chr4:57522674..57522699,-!p5@HOPX!1.14!12.67!HOPX;;chr10:3827389..3827408,-!p1@KLF6!1.13!949.59!KLF6;;chr11:67007548..67007610,+!p3@KDM2A!1.13!92.12!KDM2A;;chr2:208394817..208394834,+!p3@CREB1!1.13!50.28!CREB1;;chr14:64971461..64971542,+!p1@ZBTB1!1.12!244.12!ZBTB1;;chr1:25291475..25291511,-!p2@RUNX3!1.12!12.28!RUNX3;;chr6:106546731..106546755,+!p5@PRDM1!1.11!11.90!PRDM1;;chr7:137620650..137620677,-!p3@CREB3L2!1.11!11.90!CREB3L2;;chr2:28615716..28615733,+!p1@FOSL2!1.10!541.58!FOSL2;;chr19:45971060..45971122,+!p3@FOSB!1.10!11.51!FOSB;;chr2:97202480..97202499,+!p1@ARID5A!1.09!114.00!ARID5A;;chr1:10754477..10754517,-!p1@CASZ1!1.09!18.81!CASZ1;;chr2:174828545..174828644,-!p1@SP3!1.08!170.42!SP3;;chr1:59249688..59249703,-!p3@JUN!1.08!66.02!JUN;;chr3:18486354..18486377,-!p2@SATB1!1.08!13.82!SATB1;;chr4:57522598..57522664,-!p3@HOPX!1.08!11.13!HOPX;;chr11:128563948..128564003,+!p1@FLI1!1.07!130.50!FLI1;;chr5:172483347..172483407,+!p1@C5orf41!1.06!79.45!CREBRF;;chr9:102584128..102584144,+!p3@NR4A3!1.06!20.34!NR4A3;;chr1:25256439..25256476,-!p3@RUNX3!1.06!10.36!RUNX3;;chr2:192015677..192015691,-!p3@STAT4!1.06!10.36!STAT4;;chr8:123793988..123794016,+!p1@ZHX2!1.05!18.04!ZHX2;;chrX:106960249..106960260,-!p5@TSC22D3!1.05!16.50!TSC22D3;;chr3:101546827..101546847,+!p2@NFKBIZ!1.05!14.59!NFKBIZ;;chr14:75746722..75746777,+!p2@FOS!1.05!13.05!FOS;;chr19:12902289..12902307,+!p1@JUNB!1.04!2315.26!JUNB;;chr3:101568349..101568365,+!p1@NFKBIZ!1.04!519.32!NFKBIZ;;chr6:106534192..106534224,+!p1@PRDM1!1.04!28.40!PRDM1;;chr9:110250697..110250738,-!p2@KLF4!1.04!11.90!KLF4;;chr17:38020557..38020572,-!p4@IKZF3!1.04!9.98!IKZF3;;chr4:83822246..83822277,+!p5@THAP9!1.04!9.98!THAP9;;chr3:5021113..5021180,+!p1@BHLHE40!1.03!683.98!BHLHE40;;chr1:212782094..212782109,+!p1@ATF3!1.03!270.22!ATF3;;chr9:129567282..129567353,+!p1@ZBTB43!1.03!129.73!ZBTB43;;chr8:67525473..67525518,-!p1@MYBL1!1.03!22.26!MYBL1;;chr8:71316428..71316459,-!p2@NCOA2!1.03!16.50!NCOA2;;chr2:145275162..145275202,-!p2@ZEB2!1.02!56.81!ZEB2;;chr10:64576105..64576133,-!p1@EGR2!1.02!19.58!EGR2;;chr10:51572408..51572454,+!p3@NCOA4!1.01!54.50!NCOA4;;chr2:28616358..28616380,+!p3@FOSL2!1.01!48.75!FOSL2;;chr7:106809470..106809481,+!p2@HBP1!1.01!13.05!HBP1;;chr12:54694758..54694805,-!p1@NFE2!1.01!11.13!NFE2;;chr17:38497662..38497713,+!p4@RARA!1.01!10.75!RARA;;chr16:89789271..89789291,+!p5@ZNF276!1.01!9.21!ZNF276;;chr17:45810816..45810838,+!p2@TBX21!1.01!9.21!TBX21;;chr11:47400032..47400043,-!p5@SPI1!1.01!9.21!SPI1;;chr2:8822176..8822196,+!p1@ID2!1.00!1287.75!ID2;;chr4:38665769..38665801,+!p2@KLF3!1.00!82.52!KLF3;;chr20:44600199..44600219,-!p3@ZNF335!1.00!12.28!ZNF335;;chr7:17338324..17338341,+!p3@AHR!0.99!30.32!AHR;;chr10:35416142..35416169,+!p3@CREM!0.99!23.80!CREM;;chr6:106534230..106534254,+!p2@PRDM1!0.99!22.26!PRDM1;;chr3:63898321..63898396,+!p3@ATXN7!0.99!20.34!ATXN7;;chr19:19729477..19729542,-!p1@PBX4!0.99!19.19!PBX4;;chr1:151030536..151030549,+!p8@MLLT11!0.99!8.83!MLLT11;;chr3:27763807..27763822,-!p1@EOMES!0.99!8.83!EOMES;;chr1:59249707..59249727,-!p1@JUN!0.98!370.40!JUN;;chr4:103422499..103422632,+!p1@NFKB1!0.98!181.94!NFKB1;;chr19:12721790..12721810,+!p2@ZNF791!0.98!24.18!ZNF791;;chr11:47400045..47400060,-!p6@SPI1!0.98!8.44!SPI1;;chr6:151712673..151712709,-!p1@ZBTB2!0.97!48.75!ZBTB2;;chr1:157108130..157108173,-!p1@ETV3!0.96!61.03!ETV3;;chr3:39195037..39195069,-!p2@CSRNP1!0.96!52.20!CSRNP1;;chr7:149470641..149470694,-!p1@ZNF467!0.96!38.00!ZNF467;;chr16:3313791..3313834,+!p2@ZNF263!0.96!18.42!ZNF263;;chr17:37934204..37934241,-!p3@IKZF3!0.96!8.06!IKZF3;;chr21:34442439..34442455,+!p1@OLIG1!0.96!8.06!OLIG1;;chr14:35874077..35874091,-!p8@NFKBIA!0.96!8.06!NFKBIA;;chr3:128212033..128212051,-!p1@GATA2!0.96!8.06!GATA2;;chr19:47616992..47617011,-!p4@ZC3H4!0.95!17.27!ZC3H4;;chr1:157108282..157108347,-!p3@ETV3!0.95!16.89!ETV3;;chr8:81397846..81397860,+!p3@ZBTB10!0.95!9.98!ZBTB10;;chr6:144385698..144385742,-!p2@PLAGL1!0.95!9.60!PLAGL1;;chr1:37940170..37940190,+!p1@ZC3H12A!0.94!98.64!ZC3H12A;;chr10:3827417..3827428,-!p3@KLF6!0.94!67.94!KLF6;;chr20:48807456..48807475,+!p3@CEBPB!0.94!15.35!CEBPB;;chr3:150126904..150126958,+!p7@TSC22D2!0.94!13.82!TSC22D2;;chr9:110252074..110252079,-!p3@KLF4!0.94!13.05!KLF4;;chr7:99680193..99680204,-!p2@ZNF3!0.94!7.68!ZNF3;;chr1:2160609..2160623,+!p8@SKI!0.94!7.68!SKI;;chr16:29819630..29819645,+!p37@MAZ!0.94!7.68!MAZ;;chr17:38020516..38020544,-!p5@IKZF3!0.94!7.68!IKZF3;;chr22:38597987..38598021,+!p2@MAFF!0.93!47.21!MAFF;;chr19:45252008..45252024,+!p2@BCL3!0.93!25.72!BCL3;;chr22:50247528..50247568,+!p2@ZBED4!0.93!18.81!ZBED4;;chr8:81397820..81397836,+!p2@ZBTB10!0.93!9.60!ZBTB10;;chr4:38665810..38665827,+!p1@KLF3!0.92!112.08!KLF3;;chr10:104154246..104154347,+!p3@NFKB2!0.92!47.21!NFKB2;;chr19:53289995..53290050,-!p1@ZNF600!0.92!31.47!ZNF600;;chr21:30671690..30671762,+!p2@BACH1!0.92!25.72!BACH1;;chr19:45251395..45251432,+!p8@BCL3!0.92!7.29!BCL3;;chr1:92951607..92951661,-!p1@GFI1!0.92!7.29!GFI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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000094;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000763;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000766;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000767;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988
|ffid_belonging_in_development=CL:0000049,CL:0000134
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 67: Line 41:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/Basophils%252c%2520donor2.CNhs12563.12242-129H1.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/Basophils%252c%2520donor2.CNhs12563.12242-129H1.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/Basophils%252c%2520donor2.CNhs12563.12242-129H1.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/Basophils%252c%2520donor2.CNhs12563.12242-129H1.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/Basophils%252c%2520donor2.CNhs12563.12242-129H1.hg38.nobarcode.ctss.bed.gz
|id=FF:12242-129H1
|is_a=EFO:0002091;;FF:0000212
|is_obsolete=
|library_id=CNhs12563
|library_id_phase_based=2:CNhs12563
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;12242
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;12242
|name=Basophils, donor2
|namespace=FANTOM5
|part_of=
|profile_cagescan=,,,
|profile_hcage=CNhs12563,LSID921,release011,COMPLETED
|profile_rnaseq=
|profile_srnaseq=,,,
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|rna_box=129
|rna_catalog_number=3H100-93-5
|rna_concentration=0.13566
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0
|rna_lot_number=
|rna_od260/230=1.14
|rna_od260/280=2.02
|rna_position=H1
|rna_rin=9.4
|rna_sample_type=total RNA
|rna_tube_id=129H1
|rna_weight_ug=1.62792
|sample_age=
|sample_category=primary cells
|sample_cell_catalog=N/A
|sample_cell_line=
|sample_cell_lot=lot:BASO744
|sample_cell_type=basophil
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=3HBiomedical
|sample_description=
|sample_dev_stage=
|sample_disease=
|sample_donor(cell lot)=
|sample_ethnicity=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.88529883145155e-226!GO:0043227;membrane-bound organelle;7.55249964101255e-154!GO:0043231;intracellular membrane-bound organelle;1.3500861340913e-153!GO:0043226;organelle;2.5368990427666e-143!GO:0043229;intracellular organelle;1.15981660093018e-142!GO:0005737;cytoplasm;2.19312055984403e-123!GO:0044422;organelle part;6.01220671871363e-92!GO:0044446;intracellular organelle part;2.3023297879913e-90!GO:0043170;macromolecule metabolic process;9.41059721049662e-84!GO:0005634;nucleus;1.38784976805659e-81!GO:0044237;cellular metabolic process;2.2288897938552e-80!GO:0044238;primary metabolic process;2.3765435304496e-79!GO:0044444;cytoplasmic part;2.11241707755028e-78!GO:0032991;macromolecular complex;1.3063500413762e-77!GO:0005515;protein binding;8.12639891126964e-73!GO:0003723;RNA binding;1.20615532033316e-69!GO:0044428;nuclear part;2.97180612519244e-68!GO:0030529;ribonucleoprotein complex;6.09101199762284e-64!GO:0043283;biopolymer metabolic process;2.39146812864068e-55!GO:0043233;organelle lumen;1.04315617661488e-54!GO:0031974;membrane-enclosed lumen;1.04315617661488e-54!GO:0019538;protein metabolic process;4.79505880244998e-50!GO:0044267;cellular protein metabolic process;1.88512911579014e-47!GO:0044260;cellular macromolecule metabolic process;5.75010917267949e-47!GO:0010467;gene expression;6.32920490476503e-47!GO:0033036;macromolecule localization;3.46177579651744e-46!GO:0006412;translation;9.59763115093998e-45!GO:0015031;protein transport;5.68828089441699e-44!GO:0045184;establishment of protein localization;8.72369337868582e-44!GO:0031981;nuclear lumen;1.29246133137807e-43!GO:0008104;protein localization;3.37423421589591e-42!GO:0006396;RNA processing;3.6275574705322e-42!GO:0016071;mRNA metabolic process;4.03547456089286e-41!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;6.82532709692732e-40!GO:0043234;protein complex;8.72527291841918e-40!GO:0008380;RNA splicing;5.36047404957738e-36!GO:0006397;mRNA processing;6.42773469852324e-35!GO:0016043;cellular component organization and biogenesis;3.29158713671687e-33!GO:0009059;macromolecule biosynthetic process;1.66454085945857e-32!GO:0005840;ribosome;5.57500622649585e-32!GO:0005829;cytosol;7.83277163374271e-32!GO:0031090;organelle membrane;2.08644694894595e-31!GO:0005739;mitochondrion;4.29194415593139e-31!GO:0012501;programmed cell death;4.79688256532713e-31!GO:0006915;apoptosis;4.79688256532713e-31!GO:0008219;cell death;4.44882162084651e-30!GO:0016265;death;4.44882162084651e-30!GO:0006886;intracellular protein transport;1.27798951828594e-29!GO:0046907;intracellular transport;2.13128612687843e-29!GO:0003676;nucleic acid binding;1.01636063284732e-28!GO:0031967;organelle envelope;1.97235519380757e-28!GO:0065003;macromolecular complex assembly;2.63766787026683e-28!GO:0031975;envelope;3.92260247213547e-28!GO:0003735;structural constituent of ribosome;5.58271045078996e-28!GO:0005654;nucleoplasm;1.65345717314928e-27!GO:0005681;spliceosome;2.51001157581038e-27!GO:0033279;ribosomal subunit;9.74956001713993e-27!GO:0009058;biosynthetic process;2.63156068317085e-25!GO:0044249;cellular biosynthetic process;2.98968780240244e-25!GO:0000166;nucleotide binding;5.59061782676563e-25!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.4465509745898e-24!GO:0016070;RNA metabolic process;3.38239402031674e-24!GO:0022607;cellular component assembly;4.53310221389733e-24!GO:0022613;ribonucleoprotein complex biogenesis and assembly;8.15984427090915e-24!GO:0044429;mitochondrial part;1.58254396122364e-23!GO:0006259;DNA metabolic process;3.72121637221473e-23!GO:0051649;establishment of cellular localization;9.24870614241075e-23!GO:0051641;cellular localization;1.67609644000102e-22!GO:0006512;ubiquitin cycle;2.1499028221819e-22!GO:0044451;nucleoplasm part;2.41097027745558e-22!GO:0008134;transcription factor binding;1.40931029805962e-21!GO:0044445;cytosolic part;1.82631014956745e-21!GO:0043412;biopolymer modification;2.16082583355483e-21!GO:0042981;regulation of apoptosis;4.56611716846008e-21!GO:0043067;regulation of programmed cell death;8.52079236006866e-21!GO:0006996;organelle organization and biogenesis;6.5716743214707e-20!GO:0016462;pyrophosphatase activity;3.04377143639458e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;3.31233394556251e-19!GO:0017111;nucleoside-triphosphatase activity;3.70783144213889e-19!GO:0016817;hydrolase activity, acting on acid anhydrides;4.2532483692778e-19!GO:0006464;protein modification process;4.26230029611405e-19!GO:0044265;cellular macromolecule catabolic process;6.44068695742915e-19!GO:0043687;post-translational protein modification;1.04366320122088e-18!GO:0022618;protein-RNA complex assembly;1.58500740708953e-18!GO:0032553;ribonucleotide binding;1.89054236371429e-18!GO:0032555;purine ribonucleotide binding;1.89054236371429e-18!GO:0019941;modification-dependent protein catabolic process;3.56338010160128e-18!GO:0043632;modification-dependent macromolecule catabolic process;3.56338010160128e-18!GO:0051603;proteolysis involved in cellular protein catabolic process;3.98561441319373e-18!GO:0006511;ubiquitin-dependent protein catabolic process;4.21461978383652e-18!GO:0050794;regulation of cellular process;4.55241011052521e-18!GO:0044257;cellular protein catabolic process;8.12217579855915e-18!GO:0017076;purine nucleotide binding;2.52150890316689e-17!GO:0016604;nuclear body;8.62253665442557e-17!GO:0005740;mitochondrial envelope;1.05852548493456e-16!GO:0006913;nucleocytoplasmic transport;1.12492999207872e-16!GO:0043285;biopolymer catabolic process;1.50552441379431e-16!GO:0031966;mitochondrial membrane;1.63768966018006e-16!GO:0006605;protein targeting;1.93748093603674e-16!GO:0051169;nuclear transport;2.40302140794221e-16!GO:0048523;negative regulation of cellular process;3.56927385633172e-16!GO:0019866;organelle inner membrane;4.18674495925176e-16!GO:0006119;oxidative phosphorylation;7.12495506518048e-16!GO:0005730;nucleolus;8.21357487035711e-16!GO:0016874;ligase activity;1.34779919898028e-15!GO:0007243;protein kinase cascade;3.95122583759122e-15!GO:0008135;translation factor activity, nucleic acid binding;1.31138995027931e-14!GO:0016607;nuclear speck;1.40877656084935e-14!GO:0002376;immune system process;1.78680882095508e-14!GO:0009057;macromolecule catabolic process;1.89213826601041e-14!GO:0043228;non-membrane-bound organelle;2.17766617542581e-14!GO:0043232;intracellular non-membrane-bound organelle;2.17766617542581e-14!GO:0005524;ATP binding;2.53385266343838e-14!GO:0006793;phosphorus metabolic process;3.89420890513704e-14!GO:0006796;phosphate metabolic process;3.89420890513704e-14!GO:0015935;small ribosomal subunit;3.94361358330545e-14!GO:0048519;negative regulation of biological process;4.40960239627312e-14!GO:0032559;adenyl ribonucleotide binding;5.40191928028415e-14!GO:0003712;transcription cofactor activity;6.00316936861593e-14!GO:0016192;vesicle-mediated transport;6.12920401081641e-14!GO:0005743;mitochondrial inner membrane;6.96790445511697e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.43453310895691e-13!GO:0015934;large ribosomal subunit;1.53596479512417e-13!GO:0050789;regulation of biological process;2.74300638871441e-13!GO:0006325;establishment and/or maintenance of chromatin architecture;2.75154834340079e-13!GO:0048770;pigment granule;3.06104249996705e-13!GO:0042470;melanosome;3.06104249996705e-13!GO:0030163;protein catabolic process;3.52399416791845e-13!GO:0000398;nuclear mRNA splicing, via spliceosome;4.53400205215772e-13!GO:0000375;RNA splicing, via transesterification reactions;4.53400205215772e-13!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.53400205215772e-13!GO:0006366;transcription from RNA polymerase II promoter;7.19134529335517e-13!GO:0044248;cellular catabolic process;7.28667064684931e-13!GO:0030554;adenyl nucleotide binding;8.00867907958065e-13!GO:0006323;DNA packaging;1.19126395144558e-12!GO:0006457;protein folding;1.24593010312477e-12!GO:0007242;intracellular signaling cascade;1.28761394804278e-12!GO:0005635;nuclear envelope;1.71208293624967e-12!GO:0051246;regulation of protein metabolic process;1.89643800181151e-12!GO:0007249;I-kappaB kinase/NF-kappaB cascade;2.22809986392899e-12!GO:0007049;cell cycle;2.30117995677704e-12!GO:0016310;phosphorylation;2.44573279155505e-12!GO:0000502;proteasome complex (sensu Eukaryota);2.99643771212102e-12!GO:0044455;mitochondrial membrane part;3.88948082148613e-12!GO:0051276;chromosome organization and biogenesis;4.55116825628583e-12!GO:0003743;translation initiation factor activity;5.49351647298149e-12!GO:0065009;regulation of a molecular function;5.53492888431045e-12!GO:0012505;endomembrane system;5.57615642016484e-12!GO:0006413;translational initiation;6.2290507172463e-12!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;7.56740744438318e-12!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);7.92260413038597e-12!GO:0043069;negative regulation of programmed cell death;8.59682429832683e-12!GO:0019222;regulation of metabolic process;1.1572425484527e-11!GO:0016887;ATPase activity;1.21141297707438e-11!GO:0043066;negative regulation of apoptosis;1.34492306428186e-11!GO:0006974;response to DNA damage stimulus;1.46204412910802e-11!GO:0017038;protein import;1.95208404675229e-11!GO:0042623;ATPase activity, coupled;3.57966865088115e-11!GO:0005768;endosome;6.91183644948854e-11!GO:0031965;nuclear membrane;9.10555354645334e-11!GO:0008639;small protein conjugating enzyme activity;1.12919264925462e-10!GO:0006446;regulation of translational initiation;1.1807002367185e-10!GO:0006916;anti-apoptosis;1.40620435185387e-10!GO:0004386;helicase activity;1.9477281178257e-10!GO:0004842;ubiquitin-protein ligase activity;2.15077580674544e-10!GO:0005746;mitochondrial respiratory chain;2.24093487701767e-10!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;2.3908391866075e-10!GO:0065007;biological regulation;2.66119971309229e-10!GO:0006955;immune response;2.98233660247817e-10!GO:0031324;negative regulation of cellular metabolic process;3.39081623364784e-10!GO:0051726;regulation of cell cycle;3.93332488068021e-10!GO:0005794;Golgi apparatus;4.61168173197787e-10!GO:0044453;nuclear membrane part;4.91807469849882e-10!GO:0000074;regulation of progression through cell cycle;6.76836340934077e-10!GO:0051170;nuclear import;8.17847443673891e-10!GO:0008026;ATP-dependent helicase activity;8.25341334390655e-10!GO:0019787;small conjugating protein ligase activity;9.14139052144994e-10!GO:0006606;protein import into nucleus;9.27419526308325e-10!GO:0050657;nucleic acid transport;1.26629529682349e-09!GO:0051236;establishment of RNA localization;1.26629529682349e-09!GO:0050658;RNA transport;1.26629529682349e-09!GO:0006403;RNA localization;1.85734872550062e-09!GO:0016568;chromatin modification;2.60845994962032e-09!GO:0050136;NADH dehydrogenase (quinone) activity;2.61546599225538e-09!GO:0003954;NADH dehydrogenase activity;2.61546599225538e-09!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.61546599225538e-09!GO:0048522;positive regulation of cellular process;2.94111284233105e-09!GO:0006950;response to stress;3.62872935236266e-09!GO:0016787;hydrolase activity;3.66391383109133e-09!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;3.89903496767804e-09!GO:0031980;mitochondrial lumen;4.11547069216414e-09!GO:0005759;mitochondrial matrix;4.11547069216414e-09!GO:0009892;negative regulation of metabolic process;4.13817275108396e-09!GO:0043065;positive regulation of apoptosis;4.48141245875578e-09!GO:0005773;vacuole;4.48141245875578e-09!GO:0031323;regulation of cellular metabolic process;5.17052450652657e-09!GO:0043068;positive regulation of programmed cell death;7.2021062420318e-09!GO:0016564;transcription repressor activity;7.48913395788943e-09!GO:0003713;transcription coactivator activity;7.55703776862447e-09!GO:0006417;regulation of translation;7.89400705063731e-09!GO:0019829;cation-transporting ATPase activity;8.00915498772082e-09!GO:0048193;Golgi vesicle transport;8.20255263707183e-09!GO:0006281;DNA repair;1.10599451018395e-08!GO:0006333;chromatin assembly or disassembly;1.16646830930393e-08!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.16668510911991e-08!GO:0065004;protein-DNA complex assembly;1.26773617835613e-08!GO:0051082;unfolded protein binding;1.2826069321818e-08!GO:0005643;nuclear pore;1.51858742842562e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.91095563364904e-08!GO:0050790;regulation of catalytic activity;2.48557965145936e-08!GO:0016563;transcription activator activity;3.28462820835466e-08!GO:0042775;organelle ATP synthesis coupled electron transport;3.54897730912582e-08!GO:0042773;ATP synthesis coupled electron transport;3.54897730912582e-08!GO:0019899;enzyme binding;3.56619961558265e-08!GO:0000323;lytic vacuole;4.35033028147704e-08!GO:0005764;lysosome;4.35033028147704e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;4.41109911237964e-08!GO:0045321;leukocyte activation;5.12929315496007e-08!GO:0022402;cell cycle process;6.67371167230858e-08!GO:0008565;protein transporter activity;6.84493475160252e-08!GO:0016481;negative regulation of transcription;7.29490350935144e-08!GO:0006917;induction of apoptosis;7.47205679663631e-08!GO:0048518;positive regulation of biological process;7.79033681053293e-08!GO:0051028;mRNA transport;7.8161953362702e-08!GO:0030964;NADH dehydrogenase complex (quinone);8.5292846851445e-08!GO:0045271;respiratory chain complex I;8.5292846851445e-08!GO:0005747;mitochondrial respiratory chain complex I;8.5292846851445e-08!GO:0005694;chromosome;8.60589878896962e-08!GO:0009056;catabolic process;1.14554791610835e-07!GO:0016881;acid-amino acid ligase activity;1.16086971843811e-07!GO:0051186;cofactor metabolic process;1.16691507602425e-07!GO:0009889;regulation of biosynthetic process;1.18180517442203e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.21990429284288e-07!GO:0012502;induction of programmed cell death;1.26699711055343e-07!GO:0003924;GTPase activity;1.31888984655912e-07!GO:0031326;regulation of cellular biosynthetic process;1.43517050776748e-07!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.73542484569257e-07!GO:0032446;protein modification by small protein conjugation;2.05816128820614e-07!GO:0045786;negative regulation of progression through cell cycle;2.10182425385752e-07!GO:0005770;late endosome;2.10182425385752e-07!GO:0009719;response to endogenous stimulus;2.12416806357936e-07!GO:0009967;positive regulation of signal transduction;2.80590559146677e-07!GO:0016772;transferase activity, transferring phosphorus-containing groups;2.92499300664566e-07!GO:0009615;response to virus;3.23499023843724e-07!GO:0042254;ribosome biogenesis and assembly;3.31633275339155e-07!GO:0015986;ATP synthesis coupled proton transport;3.43429804590478e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.43429804590478e-07!GO:0016567;protein ubiquitination;4.12154444760895e-07!GO:0042110;T cell activation;4.39968817745554e-07!GO:0043566;structure-specific DNA binding;4.59094686545816e-07!GO:0044440;endosomal part;4.68246126337467e-07!GO:0010008;endosome membrane;4.68246126337467e-07!GO:0046649;lymphocyte activation;4.8929228600666e-07!GO:0010468;regulation of gene expression;5.16396753203104e-07!GO:0065002;intracellular protein transport across a membrane;5.29200785193945e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;5.38257209236965e-07!GO:0005783;endoplasmic reticulum;5.51982295955608e-07!GO:0000785;chromatin;6.28935541596476e-07!GO:0005525;GTP binding;6.34805915973204e-07!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;6.67271731861551e-07!GO:0009259;ribonucleotide metabolic process;7.40346008117832e-07!GO:0046930;pore complex;8.11228348349453e-07!GO:0006461;protein complex assembly;1.01082433935873e-06!GO:0006350;transcription;1.10184161162044e-06!GO:0044427;chromosomal part;1.13814847211352e-06!GO:0009260;ribonucleotide biosynthetic process;1.21512164727022e-06!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.271089596495e-06!GO:0015078;hydrogen ion transmembrane transporter activity;1.41487703622596e-06!GO:0009152;purine ribonucleotide biosynthetic process;1.48972300747391e-06!GO:0009150;purine ribonucleotide metabolic process;2.02491206211571e-06!GO:0006164;purine nucleotide biosynthetic process;2.02916677328954e-06!GO:0016469;proton-transporting two-sector ATPase complex;2.06381872188674e-06!GO:0006732;coenzyme metabolic process;2.19205041756976e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;2.22607348980086e-06!GO:0003697;single-stranded DNA binding;2.26934575048106e-06!GO:0006163;purine nucleotide metabolic process;2.46616414240288e-06!GO:0005793;ER-Golgi intermediate compartment;2.58262713133909e-06!GO:0007264;small GTPase mediated signal transduction;2.88678387588397e-06!GO:0006754;ATP biosynthetic process;2.90815381336746e-06!GO:0006753;nucleoside phosphate metabolic process;2.90815381336746e-06!GO:0030532;small nuclear ribonucleoprotein complex;3.05773629649145e-06!GO:0048468;cell development;3.52770386526382e-06!GO:0008047;enzyme activator activity;3.97311114044453e-06!GO:0009060;aerobic respiration;4.14237489028662e-06!GO:0044432;endoplasmic reticulum part;4.22441048029968e-06!GO:0008632;apoptotic program;4.23365571300243e-06!GO:0001775;cell activation;4.24755995127047e-06!GO:0009142;nucleoside triphosphate biosynthetic process;4.44496002959289e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;4.44496002959289e-06!GO:0003714;transcription corepressor activity;4.78658805808721e-06!GO:0006401;RNA catabolic process;5.18151460449814e-06!GO:0005839;proteasome core complex (sensu Eukaryota);6.10602950924607e-06!GO:0051168;nuclear export;6.51688408028429e-06!GO:0000245;spliceosome assembly;7.29453765057872e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;9.09351998262993e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;9.09351998262993e-06!GO:0000151;ubiquitin ligase complex;9.50415932457143e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.05699230161218e-05!GO:0005761;mitochondrial ribosome;1.07555040922234e-05!GO:0000313;organellar ribosome;1.07555040922234e-05!GO:0009199;ribonucleoside triphosphate metabolic process;1.16882387280544e-05!GO:0006888;ER to Golgi vesicle-mediated transport;1.20201897574688e-05!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.24210634244585e-05!GO:0032561;guanyl ribonucleotide binding;1.24683044012027e-05!GO:0019001;guanyl nucleotide binding;1.24683044012027e-05!GO:0004674;protein serine/threonine kinase activity;1.29536906196398e-05!GO:0046034;ATP metabolic process;1.30038690029748e-05!GO:0006334;nucleosome assembly;1.30182588982268e-05!GO:0060090;molecular adaptor activity;1.30686055740564e-05!GO:0031497;chromatin assembly;1.41053436091443e-05!GO:0016363;nuclear matrix;1.43401608500401e-05!GO:0003724;RNA helicase activity;1.51980263784461e-05!GO:0016740;transferase activity;1.83271959563522e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;2.08042600281336e-05!GO:0004298;threonine endopeptidase activity;2.08497883231564e-05!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.20796425981575e-05!GO:0009144;purine nucleoside triphosphate metabolic process;2.20796425981575e-05!GO:0009141;nucleoside triphosphate metabolic process;2.22774299052109e-05!GO:0009607;response to biotic stimulus;2.34672726871783e-05!GO:0006613;cotranslational protein targeting to membrane;2.34672726871783e-05!GO:0048475;coated membrane;2.49308035255935e-05!GO:0030117;membrane coat;2.49308035255935e-05!GO:0009966;regulation of signal transduction;3.13741647578971e-05!GO:0045259;proton-transporting ATP synthase complex;3.13741647578971e-05!GO:0016072;rRNA metabolic process;3.29588570730916e-05!GO:0005774;vacuolar membrane;3.35901352753018e-05!GO:0001772;immunological synapse;3.3883715911452e-05!GO:0008234;cysteine-type peptidase activity;3.46706843448989e-05!GO:0051336;regulation of hydrolase activity;3.82526666521679e-05!GO:0045333;cellular respiration;4.20680748243425e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;4.31392768288985e-05!GO:0006364;rRNA processing;4.36274326163131e-05!GO:0030120;vesicle coat;4.44903226025169e-05!GO:0030662;coated vesicle membrane;4.44903226025169e-05!GO:0001816;cytokine production;4.78592809761286e-05!GO:0006402;mRNA catabolic process;5.32735498910454e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;5.94188227898809e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;6.16608742499798e-05!GO:0015399;primary active transmembrane transporter activity;6.16608742499798e-05!GO:0002764;immune response-regulating signal transduction;6.50708056523701e-05!GO:0006260;DNA replication;7.86220851878998e-05!GO:0006399;tRNA metabolic process;8.27652673836347e-05!GO:0016197;endosome transport;8.72649530301299e-05!GO:0002757;immune response-activating signal transduction;8.72649530301299e-05!GO:0005789;endoplasmic reticulum membrane;8.87829611939782e-05!GO:0005813;centrosome;8.92093210780728e-05!GO:0051338;regulation of transferase activity;0.000100469139418166!GO:0007265;Ras protein signal transduction;0.00010144701971174!GO:0005057;receptor signaling protein activity;0.000102841791280327!GO:0001819;positive regulation of cytokine production;0.000104660074506469!GO:0009055;electron carrier activity;0.000108411142774102!GO:0031902;late endosome membrane;0.000109673003456321!GO:0031252;leading edge;0.000111596608795789!GO:0030695;GTPase regulator activity;0.00012209136502779!GO:0044437;vacuolar part;0.00012257340531705!GO:0009893;positive regulation of metabolic process;0.000123568319173091!GO:0051251;positive regulation of lymphocyte activation;0.000132319776725264!GO:0032774;RNA biosynthetic process;0.000133520923009212!GO:0043549;regulation of kinase activity;0.000134878245708722!GO:0045892;negative regulation of transcription, DNA-dependent;0.000141238165678154!GO:0006351;transcription, DNA-dependent;0.000141349506084794!GO:0002768;immune response-regulating cell surface receptor signaling pathway;0.000141349506084794!GO:0005765;lysosomal membrane;0.000148084673462472!GO:0005070;SH3/SH2 adaptor activity;0.000161328585516592!GO:0045449;regulation of transcription;0.0001634623613215!GO:0006099;tricarboxylic acid cycle;0.000168200825957211!GO:0046356;acetyl-CoA catabolic process;0.000168200825957211!GO:0008186;RNA-dependent ATPase activity;0.00017932086951829!GO:0000278;mitotic cell cycle;0.000184885996025265!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.000188004783310331!GO:0030097;hemopoiesis;0.000196477716318677!GO:0001817;regulation of cytokine production;0.000202919219588235!GO:0003729;mRNA binding;0.000210104060647823!GO:0045859;regulation of protein kinase activity;0.000222607839432634!GO:0031982;vesicle;0.000240830004809361!GO:0016779;nucleotidyltransferase activity;0.000241629469921797!GO:0005096;GTPase activator activity;0.000250937244660107!GO:0051427;hormone receptor binding;0.000273767911515039!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.000278258220189697!GO:0004812;aminoacyl-tRNA ligase activity;0.000278258220189697!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.000278258220189697!GO:0005885;Arp2/3 protein complex;0.000280886795110859!GO:0006612;protein targeting to membrane;0.000280886795110859!GO:0008270;zinc ion binding;0.000283511578422207!GO:0042101;T cell receptor complex;0.000310572450213251!GO:0051090;regulation of transcription factor activity;0.000312716577073199!GO:0051188;cofactor biosynthetic process;0.000347449108153927!GO:0005769;early endosome;0.000371217082304328!GO:0006084;acetyl-CoA metabolic process;0.00039299392748195!GO:0005815;microtubule organizing center;0.000408481700272499!GO:0046822;regulation of nucleocytoplasmic transport;0.000426136752268243!GO:0043038;amino acid activation;0.000436799433454951!GO:0006418;tRNA aminoacylation for protein translation;0.000436799433454951!GO:0043039;tRNA aminoacylation;0.000436799433454951!GO:0035257;nuclear hormone receptor binding;0.00050688583429521!GO:0051187;cofactor catabolic process;0.000511131810911251!GO:0004004;ATP-dependent RNA helicase activity;0.000517091763531558!GO:0016301;kinase activity;0.000519867526969607!GO:0043492;ATPase activity, coupled to movement of substances;0.000561515199654389!GO:0006752;group transfer coenzyme metabolic process;0.000561515199654389!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000630246450398552!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000650003115480829!GO:0006468;protein amino acid phosphorylation;0.000653870626613607!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.000679343401441012!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.000682254363918001!GO:0002520;immune system development;0.000686835608766679!GO:0022415;viral reproductive process;0.000686835608766679!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000686835608766679!GO:0003725;double-stranded RNA binding;0.000718883224613909!GO:0032940;secretion by cell;0.000758341398649278!GO:0009108;coenzyme biosynthetic process;0.000770286098207425!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000796175267680045!GO:0008654;phospholipid biosynthetic process;0.000802591202459185!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000803474581171853!GO:0043623;cellular protein complex assembly;0.000826972830526191!GO:0031410;cytoplasmic vesicle;0.000884002017557705!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000897388105197383!GO:0016251;general RNA polymerase II transcription factor activity;0.000948227551499698!GO:0007034;vacuolar transport;0.000976127321790431!GO:0031988;membrane-bound vesicle;0.000984537205105236!GO:0046983;protein dimerization activity;0.000992321031636107!GO:0019221;cytokine and chemokine mediated signaling pathway;0.000997479533440306!GO:0051789;response to protein stimulus;0.00100363576049924!GO:0006986;response to unfolded protein;0.00100363576049924!GO:0051223;regulation of protein transport;0.00100486950021878!GO:0044431;Golgi apparatus part;0.00101955086505335!GO:0030099;myeloid cell differentiation;0.00103509701663717!GO:0009109;coenzyme catabolic process;0.0010700404652899!GO:0043281;regulation of caspase activity;0.00110035447568262!GO:0043021;ribonucleoprotein binding;0.0011669760281576!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00120938300239777!GO:0007005;mitochondrion organization and biogenesis;0.00121270419142263!GO:0006611;protein export from nucleus;0.00125033045471165!GO:0016044;membrane organization and biogenesis;0.00126858611828222!GO:0007050;cell cycle arrest;0.00126858611828222!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.00126858611828222!GO:0006607;NLS-bearing substrate import into nucleus;0.00127577623404968!GO:0045941;positive regulation of transcription;0.00131685069225175!GO:0005798;Golgi-associated vesicle;0.00136381511469841!GO:0001726;ruffle;0.00155533120900811!GO:0019783;small conjugating protein-specific protease activity;0.0015705102589956!GO:0031325;positive regulation of cellular metabolic process;0.00161827304783669!GO:0005083;small GTPase regulator activity;0.00161827304783669!GO:0006352;transcription initiation;0.00163628981059159!GO:0003690;double-stranded DNA binding;0.00173263809059203!GO:0048471;perinuclear region of cytoplasm;0.00174172177645202!GO:0031072;heat shock protein binding;0.00177092206322224!GO:0005667;transcription factor complex;0.00177092206322224!GO:0006919;caspase activation;0.00181399603572683!GO:0022890;inorganic cation transmembrane transporter activity;0.00209438970169223!GO:0043280;positive regulation of caspase activity;0.00213888939257936!GO:0004843;ubiquitin-specific protease activity;0.00214675562747003!GO:0006355;regulation of transcription, DNA-dependent;0.00218146302377309!GO:0006818;hydrogen transport;0.00218164411748976!GO:0030384;phosphoinositide metabolic process;0.00227541284680031!GO:0016023;cytoplasmic membrane-bound vesicle;0.00232483906781823!GO:0045893;positive regulation of transcription, DNA-dependent;0.00236599870506974!GO:0015630;microtubule cytoskeleton;0.00236736133280276!GO:0015992;proton transport;0.00240840698953838!GO:0004715;non-membrane spanning protein tyrosine kinase activity;0.00245178193984614!GO:0005741;mitochondrial outer membrane;0.00274477923654498!GO:0005637;nuclear inner membrane;0.00282645095076127!GO:0018193;peptidyl-amino acid modification;0.00285271173622295!GO:0048534;hemopoietic or lymphoid organ development;0.002950026743598!GO:0002521;leukocyte differentiation;0.00302603860985154!GO:0050851;antigen receptor-mediated signaling pathway;0.00304314816527539!GO:0002252;immune effector process;0.00307920719388355!GO:0015631;tubulin binding;0.00310837116859903!GO:0017091;AU-rich element binding;0.00330167569986574!GO:0050779;RNA destabilization;0.00330167569986574!GO:0000289;poly(A) tail shortening;0.00330167569986574!GO:0006672;ceramide metabolic process;0.00330981489667577!GO:0051707;response to other organism;0.00341642572754019!GO:0006891;intra-Golgi vesicle-mediated transport;0.00344687503968158!GO:0050870;positive regulation of T cell activation;0.00350028157623145!GO:0051092;activation of NF-kappaB transcription factor;0.00350028157623145!GO:0008287;protein serine/threonine phosphatase complex;0.00350189694546783!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00350248588224389!GO:0046914;transition metal ion binding;0.00353326811784917!GO:0045637;regulation of myeloid cell differentiation;0.0035511110421207!GO:0050871;positive regulation of B cell activation;0.00365924485493375!GO:0009117;nucleotide metabolic process;0.00383627065684337!GO:0043087;regulation of GTPase activity;0.00389029576180418!GO:0019220;regulation of phosphate metabolic process;0.00400715969614636!GO:0051174;regulation of phosphorus metabolic process;0.00400715969614636!GO:0050865;regulation of cell activation;0.00400715969614636!GO:0019843;rRNA binding;0.00408085806981405!GO:0051252;regulation of RNA metabolic process;0.00409822138091524!GO:0046966;thyroid hormone receptor binding;0.00411101649194092!GO:0006310;DNA recombination;0.00411101649194092!GO:0002440;production of molecular mediator of immune response;0.00414213721737433!GO:0030658;transport vesicle membrane;0.00415135700030856!GO:0031968;organelle outer membrane;0.00415481498728352!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00415481498728352!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00415481498728352!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00415481498728352!GO:0046519;sphingoid metabolic process;0.00425361997453346!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00430724678998235!GO:0006261;DNA-dependent DNA replication;0.0043942140464257!GO:0033157;regulation of intracellular protein transport;0.00440522210861444!GO:0042306;regulation of protein import into nucleus;0.00440522210861444!GO:0030258;lipid modification;0.00444074984818343!GO:0006405;RNA export from nucleus;0.00444427185293348!GO:0031625;ubiquitin protein ligase binding;0.00444844566128295!GO:0006984;ER-nuclear signaling pathway;0.00445399976063033!GO:0043085;positive regulation of catalytic activity;0.00456875566690927!GO:0004221;ubiquitin thiolesterase activity;0.00459161221213816!GO:0019867;outer membrane;0.00464186471319285!GO:0048500;signal recognition particle;0.00469195182533886!GO:0002274;myeloid leukocyte activation;0.00475894818909246!GO:0007259;JAK-STAT cascade;0.00483368173315528!GO:0051249;regulation of lymphocyte activation;0.00495442786951335!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00505986072051248!GO:0050900;leukocyte migration;0.00520131792827047!GO:0042287;MHC protein binding;0.00537292980263731!GO:0016791;phosphoric monoester hydrolase activity;0.00553800279055676!GO:0007041;lysosomal transport;0.00557155674313554!GO:0006650;glycerophospholipid metabolic process;0.00561694234335083!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00563327200208931!GO:0030968;unfolded protein response;0.00568612211526459!GO:0030217;T cell differentiation;0.00579726211755776!GO:0003711;transcription elongation regulator activity;0.00600823284633862!GO:0016311;dephosphorylation;0.00672353392074415!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00672646719206706!GO:0019904;protein domain specific binding;0.00700698657206223!GO:0051345;positive regulation of hydrolase activity;0.00727356010871436!GO:0016584;nucleosome positioning;0.00745242172953074!GO:0019901;protein kinase binding;0.00755858452323014!GO:0051098;regulation of binding;0.00757475388302433!GO:0033116;ER-Golgi intermediate compartment membrane;0.0076133237987114!GO:0006367;transcription initiation from RNA polymerase II promoter;0.00767528985555725!GO:0045058;T cell selection;0.00769163831045761!GO:0043433;negative regulation of transcription factor activity;0.00780294469910501!GO:0043488;regulation of mRNA stability;0.00788297796207624!GO:0043487;regulation of RNA stability;0.00788297796207624!GO:0006643;membrane lipid metabolic process;0.00800998024298738!GO:0022411;cellular component disassembly;0.008054264129893!GO:0046467;membrane lipid biosynthetic process;0.00870991806716668!GO:0051091;positive regulation of transcription factor activity;0.00874922219512085!GO:0030041;actin filament polymerization;0.00898572772115609!GO:0046489;phosphoinositide biosynthetic process;0.00906810133498049!GO:0000209;protein polyubiquitination;0.00931059848572726!GO:0045045;secretory pathway;0.00950607547263183!GO:0050863;regulation of T cell activation;0.00954941467775001!GO:0030036;actin cytoskeleton organization and biogenesis;0.00958066455295574!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00964281205110111!GO:0045047;protein targeting to ER;0.00964281205110111!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00964458814078401!GO:0045603;positive regulation of endothelial cell differentiation;0.00978818697779833!GO:0002443;leukocyte mediated immunity;0.0101083401577379!GO:0000786;nucleosome;0.0101161305050784!GO:0033673;negative regulation of kinase activity;0.0103879852360532!GO:0006469;negative regulation of protein kinase activity;0.0103879852360532!GO:0030660;Golgi-associated vesicle membrane;0.0104602057086245!GO:0004722;protein serine/threonine phosphatase activity;0.0104836525642313!GO:0019079;viral genome replication;0.010667395384888!GO:0030518;steroid hormone receptor signaling pathway;0.0106934048511566!GO:0042990;regulation of transcription factor import into nucleus;0.010816085515675!GO:0042991;transcription factor import into nucleus;0.010816085515675!GO:0033367;protein localization in mast cell secretory granule;0.010816085515675!GO:0033365;protein localization in organelle;0.010816085515675!GO:0033371;T cell secretory granule organization and biogenesis;0.010816085515675!GO:0033373;maintenance of protease localization in mast cell secretory granule;0.010816085515675!GO:0033375;protease localization in T cell secretory granule;0.010816085515675!GO:0042629;mast cell granule;0.010816085515675!GO:0033377;maintenance of protein localization in T cell secretory granule;0.010816085515675!GO:0033364;mast cell secretory granule organization and biogenesis;0.010816085515675!GO:0033380;granzyme B localization in T cell secretory granule;0.010816085515675!GO:0033379;maintenance of protease localization in T cell secretory granule;0.010816085515675!GO:0033370;maintenance of protein localization in mast cell secretory granule;0.010816085515675!GO:0033368;protease localization in mast cell secretory granule;0.010816085515675!GO:0033366;protein localization in secretory granule;0.010816085515675!GO:0033382;maintenance of granzyme B localization in T cell secretory granule;0.010816085515675!GO:0033374;protein localization in T cell secretory granule;0.010816085515675!GO:0046474;glycerophospholipid biosynthetic process;0.0110713677387283!GO:0008312;7S RNA binding;0.0116439998143751!GO:0006376;mRNA splice site selection;0.0119441564511382!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0119441564511382!GO:0019058;viral infectious cycle;0.0119441564511382!GO:0008624;induction of apoptosis by extracellular signals;0.0119441564511382!GO:0030118;clathrin coat;0.0119441564511382!GO:0045454;cell redox homeostasis;0.0119441564511382!GO:0030127;COPII vesicle coat;0.0119441564511382!GO:0012507;ER to Golgi transport vesicle membrane;0.0119441564511382!GO:0008139;nuclear localization sequence binding;0.0120457532258481!GO:0008637;apoptotic mitochondrial changes;0.0123140175738649!GO:0032318;regulation of Ras GTPase activity;0.0124775743878833!GO:0000139;Golgi membrane;0.0125186776482516!GO:0051348;negative regulation of transferase activity;0.0126136396006431!GO:0042802;identical protein binding;0.0126309431596203!GO:0004185;serine carboxypeptidase activity;0.0127077731473613!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0129027612653863!GO:0005669;transcription factor TFIID complex;0.0130634211383543!GO:0004197;cysteine-type endopeptidase activity;0.0130634211383543!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0130634211383543!GO:0043681;protein import into mitochondrion;0.0132082975380388!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0134917212955264!GO:0030521;androgen receptor signaling pathway;0.0135378356939341!GO:0005684;U2-dependent spliceosome;0.0136343028336365!GO:0006414;translational elongation;0.0138339271429737!GO:0050811;GABA receptor binding;0.013867286170373!GO:0000087;M phase of mitotic cell cycle;0.013867286170373!GO:0051087;chaperone binding;0.0145669896165862!GO:0048487;beta-tubulin binding;0.0147359581878524!GO:0008017;microtubule binding;0.0149715198238924!GO:0003746;translation elongation factor activity;0.0149903841591409!GO:0005762;mitochondrial large ribosomal subunit;0.0151197057791315!GO:0000315;organellar large ribosomal subunit;0.0151197057791315!GO:0006968;cellular defense response;0.0155475903078637!GO:0006338;chromatin remodeling;0.0156295766741825!GO:0005048;signal sequence binding;0.0157731854487963!GO:0031901;early endosome membrane;0.0159232627231554!GO:0006897;endocytosis;0.0161763776415692!GO:0010324;membrane invagination;0.0161763776415692!GO:0051235;maintenance of localization;0.0167009380343578!GO:0030134;ER to Golgi transport vesicle;0.0172603277399252!GO:0043022;ribosome binding;0.0172715664811154!GO:0006661;phosphatidylinositol biosynthetic process;0.0174790004828413!GO:0008629;induction of apoptosis by intracellular signals;0.0175862163551008!GO:0030149;sphingolipid catabolic process;0.0179342749561982!GO:0045576;mast cell activation;0.0180233859881384!GO:0003899;DNA-directed RNA polymerase activity;0.0180275619902413!GO:0032763;regulation of mast cell cytokine production;0.0186511453537436!GO:0032762;mast cell cytokine production;0.0186511453537436!GO:0016788;hydrolase activity, acting on ester bonds;0.0189957796916033!GO:0043300;regulation of leukocyte degranulation;0.0190871242928371!GO:0030867;rough endoplasmic reticulum membrane;0.0193032435602179!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0193032435602179!GO:0007067;mitosis;0.0193066622802955!GO:0000165;MAPKKK cascade;0.0193066622802955!GO:0047485;protein N-terminus binding;0.0194557499544945!GO:0003677;DNA binding;0.020004914920723!GO:0051329;interphase of mitotic cell cycle;0.0201382395207383!GO:0016790;thiolester hydrolase activity;0.0201889636850381!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0203738101547859!GO:0030218;erythrocyte differentiation;0.0204287824317782!GO:0006383;transcription from RNA polymerase III promoter;0.0206567413334857!GO:0015923;mannosidase activity;0.0210509510799457!GO:0005521;lamin binding;0.0217140103382298!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0219264327978801!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0219264327978801!GO:0000118;histone deacetylase complex;0.0219770210345727!GO:0051052;regulation of DNA metabolic process;0.0221439363344768!GO:0003678;DNA helicase activity;0.0221507659308493!GO:0004721;phosphoprotein phosphatase activity;0.0224513234624265!GO:0004672;protein kinase activity;0.0225808577903286!GO:0016605;PML body;0.0225941574304843!GO:0043299;leukocyte degranulation;0.0228850882404294!GO:0042325;regulation of phosphorylation;0.0229993017627453!GO:0032386;regulation of intracellular transport;0.0234063320401911!GO:0042108;positive regulation of cytokine biosynthetic process;0.0240917498541294!GO:0019900;kinase binding;0.0244521523896679!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0245255261468904!GO:0051301;cell division;0.0248828914824191!GO:0051049;regulation of transport;0.024897270624332!GO:0030433;ER-associated protein catabolic process;0.0255669627744774!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0255669627744774!GO:0051101;regulation of DNA binding;0.0257684057280957!GO:0016859;cis-trans isomerase activity;0.02581615228365!GO:0000119;mediator complex;0.0260664737377476!GO:0016585;chromatin remodeling complex;0.0262220714376269!GO:0002467;germinal center formation;0.0262638942594073!GO:0001667;ameboidal cell migration;0.0262638942594073!GO:0032027;myosin light chain binding;0.0262638942594073!GO:0004177;aminopeptidase activity;0.0262638942594073!GO:0019883;antigen processing and presentation of endogenous antigen;0.0263258316272652!GO:0007040;lysosome organization and biogenesis;0.0267231952192622!GO:0009165;nucleotide biosynthetic process;0.0273833624957815!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0281077337018396!GO:0005869;dynactin complex;0.0290689500552878!GO:0042113;B cell activation;0.0294212481601371!GO:0030176;integral to endoplasmic reticulum membrane;0.0303160700324918!GO:0005099;Ras GTPase activator activity;0.0306580393861172!GO:0019210;kinase inhibitor activity;0.0310011935082981!GO:0030522;intracellular receptor-mediated signaling pathway;0.031307726462645!GO:0051051;negative regulation of transport;0.0314766720993256!GO:0006914;autophagy;0.0316327959497403!GO:0000082;G1/S transition of mitotic cell cycle;0.0316327959497403!GO:0046854;phosphoinositide phosphorylation;0.0318380053278921!GO:0003682;chromatin binding;0.0319144799220811!GO:0002822;regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains.;0.032391687291588!GO:0002819;regulation of adaptive immune response;0.032391687291588!GO:0005791;rough endoplasmic reticulum;0.0327970616783477!GO:0002682;regulation of immune system process;0.0327970616783477!GO:0015980;energy derivation by oxidation of organic compounds;0.0330715450919253!GO:0040029;regulation of gene expression, epigenetic;0.0331853587050583!GO:0009299;mRNA transcription;0.0333065017105674!GO:0003702;RNA polymerase II transcription factor activity;0.0333264936874839!GO:0002377;immunoglobulin production;0.0333382406282454!GO:0030098;lymphocyte differentiation;0.0334689470287628!GO:0043621;protein self-association;0.0339708421856025!GO:0035035;histone acetyltransferase binding;0.0340340481816776!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.034034519609034!GO:0008154;actin polymerization and/or depolymerization;0.0343139418064812!GO:0006213;pyrimidine nucleoside metabolic process;0.0343139418064812!GO:0030674;protein binding, bridging;0.0346210635397386!GO:0019377;glycolipid catabolic process;0.0348588574211874!GO:0008022;protein C-terminus binding;0.0354547600220698!GO:0051059;NF-kappaB binding;0.0364580242163777!GO:0007006;mitochondrial membrane organization and biogenesis;0.0369265370601343!GO:0042608;T cell receptor binding;0.0369622413211453!GO:0022403;cell cycle phase;0.0375774455251251!GO:0004860;protein kinase inhibitor activity;0.0375774455251251!GO:0045736;negative regulation of cyclin-dependent protein kinase activity;0.0378824226816969!GO:0005788;endoplasmic reticulum lumen;0.0380298941694961!GO:0000060;protein import into nucleus, translocation;0.0382911803796669!GO:0051325;interphase;0.0386152865629559!GO:0032200;telomere organization and biogenesis;0.0388499844627972!GO:0000723;telomere maintenance;0.0388499844627972!GO:0000303;response to superoxide;0.0390973017795034!GO:0006302;double-strand break repair;0.0398116403820821!GO:0043407;negative regulation of MAP kinase activity;0.0399353776833443!GO:0030029;actin filament-based process;0.040203507335078!GO:0005819;spindle;0.0402692891663163!GO:0044452;nucleolar part;0.0406489962833373!GO:0045069;regulation of viral genome replication;0.040969078052398!GO:0006354;RNA elongation;0.041259711108172!GO:0001516;prostaglandin biosynthetic process;0.041277245657749!GO:0046457;prostanoid biosynthetic process;0.041277245657749!GO:0004527;exonuclease activity;0.041277245657749!GO:0002237;response to molecule of bacterial origin;0.0417621320355138!GO:0032507;maintenance of cellular protein localization;0.0419796164227534!GO:0000059;protein import into nucleus, docking;0.0422391280230164!GO:0008333;endosome to lysosome transport;0.0422391280230164!GO:0007033;vacuole organization and biogenesis;0.0422391280230164!GO:0000776;kinetochore;0.0422391280230164!GO:0030595;leukocyte chemotaxis;0.0425325665504085!GO:0002218;activation of innate immune response;0.0427017842245729!GO:0002758;innate immune response-activating signal transduction;0.0427017842245729!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0428896999640996!GO:0050852;T cell receptor signaling pathway;0.0428896999640996!GO:0022406;membrane docking;0.0436549873818191!GO:0048278;vesicle docking;0.0436549873818191!GO:0000314;organellar small ribosomal subunit;0.0438389434905222!GO:0005763;mitochondrial small ribosomal subunit;0.0438389434905222!GO:0002449;lymphocyte mediated immunity;0.0444602794244392!GO:0006904;vesicle docking during exocytosis;0.0447593938988064!GO:0001891;phagocytic cup;0.0447638172460867!GO:0006470;protein amino acid dephosphorylation;0.0447638172460867!GO:0001836;release of cytochrome c from mitochondria;0.0455324610684317!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0455324610684317!GO:0043405;regulation of MAP kinase activity;0.0464035002171583!GO:0004218;cathepsin S activity;0.0464138364859216!GO:0045947;negative regulation of translational initiation;0.0466486687337749!GO:0043304;regulation of mast cell degranulation;0.0474679374199569!GO:0002444;myeloid leukocyte mediated immunity;0.047856951725541!GO:0031098;stress-activated protein kinase signaling pathway;0.048478328905559!GO:0006926;virus-infected cell apoptosis;0.0487365812275906!GO:0006952;defense response;0.0492538829634869!GO:0006595;polyamine metabolic process;0.0493005369428476!GO:0045084;positive regulation of interleukin-12 biosynthetic process;0.049447512383584!GO:0033549;MAP kinase phosphatase activity;0.0496676769275582!GO:0017017;MAP kinase tyrosine/serine/threonine phosphatase activity;0.0496676769275582!GO:0008097;5S rRNA binding;0.0497935644166745!GO:0046834;lipid phosphorylation;0.0499666666393672
|sample_id=12242
|sample_note=
|sample_sex=
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=blood
|top_motifs=RUNX1..3:3.97760703373;RORA:3.4628167701;ETS1,2:3.30712987554;RFX2..5_RFXANK_RFXAP:2.92301840255;DMAP1_NCOR{1,2}_SMARC:2.90818587495;ATF5_CREB3:2.90711199811;NFIL3:2.87765810838;SPIB:2.83203274713;SPI1:2.78081616597;PAX2:2.77069239346;ELF1,2,4:2.74881902629;T:2.74499693266;NFKB1_REL_RELA:2.63121551136;FOSL2:2.62791633654;PAX3,7:2.61268054879;FOX{D1,D2}:2.58682868621;FOS_FOS{B,L1}_JUN{B,D}:2.56149697731;FOXO1,3,4:2.55383102465;CREB1:2.48077986173;BACH2:2.4328150556;NFE2:2.34397890407;NANOG{mouse}:2.24527192706;BPTF:2.14401570806;TGIF1:2.1275771042;ATF4:2.10073530273;HLF:1.96579468631;FOX{F1,F2,J1}:1.92741695219;HMGA1,2:1.88623475075;IRF1,2:1.86589748139;JUN:1.82973716414;RFX1:1.79685897257;CEBPA,B_DDIT3:1.76047283223;FOXN1:1.70885553483;RXRA_VDR{dimer}:1.70188453077;NFATC1..3:1.67507978173;HMX1:1.64162946204;EP300:1.5725142189;NFE2L2:1.50315455534;NKX2-1,4:1.42017563554;TBX4,5:1.41907664319;MAFB:1.39164334368;HIF1A:1.37511544577;SREBF1,2:1.32147111937;ATF2:1.30272495327;FOXP3:1.27296042272;NFE2L1:1.27199273931;IRF7:1.19132015375;ATF6:0.869728601963;SMAD1..7,9:0.833173246953;PAX6:0.766323665076;HBP1_HMGB_SSRP1_UBTF:0.688520523221;FOX{I1,J2}:0.674105299768;NANOG:0.633615687994;STAT2,4,6:0.56571348805;GATA6:0.537591352518;CDX1,2,4:0.484133538817;SOX2:0.442142427677;TLX2:0.435325105609;GLI1..3:0.435277709333;BREu{core}:0.405311789451;PDX1:0.402637582165;MYB:0.363790617218;RBPJ:0.316221319426;NR1H4:0.192439339438;DBP:0.159605122694;TFAP4:0.0944496571539;PAX8:-0.02193240975;HSF1,2:-0.0248234520748;PPARG:-0.0424838739345;POU2F1..3:-0.0543309020149;MYFfamily:-0.0609869132655;AHR_ARNT_ARNT2:-0.0929503799164;CRX:-0.0946515474497;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.117274238384;GCM1,2:-0.129616550814;FOXP1:-0.129929068165;HOXA9_MEIS1:-0.147487509037;XBP1:-0.149275988773;SOX5:-0.16995249316;POU5F1:-0.184639960122;FOXA2:-0.197435307379;ALX4:-0.210996725045;NHLH1,2:-0.235827893741;TFDP1:-0.276897381532;MEF2{A,B,C,D}:-0.281796191046;EN1,2:-0.301401750861;SRF:-0.312793640869;ESRRA:-0.323103322124;GATA4:-0.336989809159;HOX{A5,B5}:-0.353322194792;TFCP2:-0.358453134572;SPZ1:-0.370698871103;TAL1_TCF{3,4,12}:-0.385269755524;ZNF238:-0.389513319444;NFIX:-0.42144628424;ELK1,4_GABP{A,B1}:-0.436862871881;HES1:-0.443840794305;PITX1..3:-0.449769117693;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.451851033468;PAX4:-0.457770179364;ZNF384:-0.462339569371;VSX1,2:-0.477944383983;FOXD3:-0.483832333957;NKX2-2,8:-0.504534934009;LEF1_TCF7_TCF7L1,2:-0.534078361421;NR5A1,2:-0.5618605204;EGR1..3:-0.609164864636;TBP:-0.613705162611;PBX1:-0.615677276551;OCT4_SOX2{dimer}:-0.639358148618;NKX3-1:-0.643920120401;MZF1:-0.659098880316;MED-1{core}:-0.670398703154;MTF1:-0.673056360455;ZBTB16:-0.685454934011;E2F1..5:-0.691748781981;NFY{A,B,C}:-0.700032617746;MTE{core}:-0.701845033337;STAT5{A,B}:-0.705812387791;PRRX1,2:-0.746208408406;IKZF2:-0.762391538574;PATZ1:-0.785575448866;MYOD1:-0.796007875953;STAT1,3:-0.813742852901;ZEB1:-0.819660643558;HNF1A:-0.819691318949;ZFP161:-0.821175871272;ALX1:-0.851562291179;AIRE:-0.852951366065;HNF4A_NR2F1,2:-0.910221347393;PAX5:-0.925388405525;FOXM1:-0.965159302569;FOXL1:-0.969139353703;SOX{8,9,10}:-0.973269509205;SNAI1..3:-1.00143646534;ZNF148:-1.0253422488;REST:-1.02735164014;CUX2:-1.04566571645;NR3C1:-1.08391840561;NKX2-3_NKX2-5:-1.13533668025;ESR1:-1.16588680793;NRF1:-1.22291127532;TFAP2B:-1.23640456107;PRDM1:-1.23930730884;YY1:-1.27174092146;RXR{A,B,G}:-1.27291516897;ZBTB6:-1.29418429596;ZNF423:-1.3121499015;HOX{A6,A7,B6,B7}:-1.35211499161;MAZ:-1.35405365546;SP1:-1.37363301218;FOXQ1:-1.37529695815;ADNP_IRX_SIX_ZHX:-1.41878850542;MYBL2:-1.4500365683;GFI1B:-1.46092135039;bHLH_family:-1.49790273349;AR:-1.50385375368;TFAP2{A,C}:-1.53702204076;GTF2I:-1.53847011378;LHX3,4:-1.58068416768;TLX1..3_NFIC{dimer}:-1.58292988059;POU1F1:-1.59891795707;TP53:-1.62419470981;LMO2:-1.63939858154;NKX6-1,2:-1.65847110821;GFI1:-1.6916632042;CDC5L:-1.72415511001;HIC1:-1.73330654049;RREB1:-1.7736583286;GZF1:-1.79204303878;GTF2A1,2:-1.83588372334;NR6A1:-1.87394899808;TEAD1:-1.89406272716;ZIC1..3:-1.91707413153;TEF:-1.94206202323;ZNF143:-1.95456889078;EVI1:-1.97358671486;PAX1,9:-2.02412330952;TOPORS:-2.12541693771;HAND1,2:-2.13882383303;SOX17:-2.14423977584;IKZF1:-2.16016246313;KLF4:-2.16165185734;EBF1:-2.20800723275;XCPE1{core}:-2.21926407987;HOX{A4,D4}:-2.27682069292;ARID5B:-2.27971747573;UFEwm:-2.61758216366;NKX3-2:-2.63423009154;POU6F1:-2.79003022373;ONECUT1,2:-3.04223271514;POU3F1..4:-3.09680935287
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12242-129H1;search_select_hide=table117:FF:12242-129H1
}}
}}

Latest revision as of 18:36, 4 June 2020

Name:Basophils, donor2
Species:Human (Homo sapiens)
Library ID:CNhs12563
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stageNA
sexNA
ageNA
cell typebasophil
cell lineNA
company3HBiomedical
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog number3H100-93-5
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00004913
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12563 CAGE DRX008046 DRR008918
Accession ID Hg19

Library idBAMCTSS
CNhs12563 DRZ000343 DRZ001728
Accession ID Hg38

Library idBAMCTSS
CNhs12563 DRZ011693 DRZ013078
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0.141
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0.141
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.188
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.263
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190.247
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0.409
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0.141
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.271
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0.602
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40.247
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0.141
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.686
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.559
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0.141
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0.247
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.432
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.141
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40.141
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0.333
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.182
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0.61
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190.404
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.264
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140.247
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0.247
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus-0.0849
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.724
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.141
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.466
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0.519
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.524
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40.333
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0.27
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40.701
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.547
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.582
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340.404
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.519
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0.588
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.519
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0.141
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0.247
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0.141
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.741
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0.333
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0.141
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0.519
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340.404
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340.777
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0.247
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0.61
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12563

Jaspar motifP-value
MA0002.21.38821e-14
MA0003.10.944
MA0004.10.649
MA0006.10.498
MA0007.10.342
MA0009.10.136
MA0014.10.989
MA0017.10.493
MA0018.20.00122
MA0019.10.987
MA0024.10.0799
MA0025.11.62626e-4
MA0027.10.869
MA0028.10.698
MA0029.10.418
MA0030.10.034
MA0031.10.0132
MA0035.20.862
MA0038.10.557
MA0039.20.777
MA0040.10.188
MA0041.10.746
MA0042.10.648
MA0043.15.75609e-8
MA0046.10.138
MA0047.20.332
MA0048.10.572
MA0050.11.02412e-6
MA0051.10.0117
MA0052.10.271
MA0055.10.188
MA0057.10.253
MA0058.10.438
MA0059.10.64
MA0060.15.64288e-4
MA0061.19.87117e-17
MA0062.21.22739e-6
MA0065.20.196
MA0066.10.0293
MA0067.16.92611e-6
MA0068.10.0922
MA0069.10.525
MA0070.10.0491
MA0071.10.46
MA0072.10.334
MA0073.10.427
MA0074.10.402
MA0076.10.439
MA0077.10.174
MA0078.10.675
MA0079.20.382
MA0080.22.18717e-14
MA0081.11.5226e-4
MA0083.10.527
MA0084.10.353
MA0087.10.836
MA0088.10.415
MA0090.10.0258
MA0091.10.922
MA0092.10.612
MA0093.10.719
MA0099.26.13769e-31
MA0100.10.708
MA0101.16.31085e-12
MA0102.24.12771e-7
MA0103.10.0689
MA0104.20.367
MA0105.11.46812e-17
MA0106.10.207
MA0107.12.43293e-14
MA0108.20.0235
MA0111.10.524
MA0112.20.0258
MA0113.10.813
MA0114.10.736
MA0115.10.18
MA0116.12.34314e-4
MA0117.10.0111
MA0119.10.707
MA0122.10.884
MA0124.10.873
MA0125.10.103
MA0131.10.932
MA0135.10.814
MA0136.11.99387e-20
MA0137.20.771
MA0138.20.166
MA0139.10.943
MA0140.10.841
MA0141.10.635
MA0142.10.888
MA0143.10.819
MA0144.10.326
MA0145.10.659
MA0146.10.786
MA0147.10.481
MA0148.10.245
MA0149.10.562
MA0150.11.26398e-13
MA0152.10.145
MA0153.10.0379
MA0154.10.00331
MA0155.10.605
MA0156.19.32154e-19
MA0157.10.0271
MA0159.10.187
MA0160.10.148
MA0162.10.642
MA0163.12.2898e-5
MA0164.11
MA0258.10.0849
MA0259.10.971



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12563

Novel motifP-value
10.346
100.0191
1000.495
1010.603
1020.824
1030.342
1040.421
1050.141
1060.0101
1070.962
1080.522
1090.352
110.345
1100.605
1110.265
1120.525
1130.124
1140.117
1150.16
1160.461
1170.0264
1180.32
1190.861
120.276
1200.943
1210.564
1220.48
1230.0977
1240.508
1250.541
1260.135
1270.627
1280.189
1290.998
130.293
1300.381
1310.855
1320.0317
1330.358
1340.976
1350.337
1360.681
1379.61216e-4
1380.316
1390.0534
140.3
1400.497
1410.466
1420.123
1430.00149
1440.683
1450.546
1460.854
1470.231
1480.111
1490.764
150.139
1500.652
1510.147
1520.932
1530.688
1540.4
1550.379
1560.536
1570.657
1580.0786
1590.0321
160.909
1600.717
1610.873
1620.0695
1630.509
1640.175
1650.32
1660.797
1670.337
1680.175
1690.466
170.602
180.271
190.931
20.574
200.484
210.899
220.674
230.22
240.547
250.142
260.3
270.946
280.328
290.127
30.268
300.305
310.884
320.0726
330.424
340.825
350.12
360.0825
370.217
380.696
390.847
40.92
400.466
410.00334
420.283
430.0565
440.653
450.997
460.349
470.722
480.674
490.112
50.188
500.663
510.458
520.621
530.369
540.55
550.8
560.918
570.951
580.0955
590.725
60.936
600.119
610.332
620.0664
630.959
640.512
650.556
660.263
670.877
680.344
690.707
70.194
700.15
710.0466
720.302
730.378
740.137
750.0761
760.15
770.52
780.661
790.781
80.927
800.00511
810.43
820.373
830.0411
840.498
850.0837
860.0226
870.511
880.811
890.587
90.402
900.0759
910.483
920.381
930.177
940.0796
950.132
960.387
970.96
980.389
993.68457e-4



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12563


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000766 (myeloid leukocyte)
0000081 (blood cell)
0000219 (motile cell)
0000738 (leukocyte)
0000255 (eukaryotic cell)
0000094 (granulocyte)
0000767 (basophil)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000013 (human basophil sample)
0000212 (human basophil heparinase treated sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)

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