FFCP PHASE1:Mm9::chr16:18392724..18392736,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr16:18392724..18392736,+ to FFCP PHASE1:Mm9::chr16:18392724..18392736,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=11877 | |EntrezGene=11877 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=310 | |||
|TSSclassifier=NA | |||
|UniProt=P98203 | |UniProt=P98203 | ||
|association_with_transcript=42bp_to_ENSMUST00000115610_5end | |||
|cluster_id=chr16:18392724..18392736,+ | |||
|description=CAGE_peak_3_at_Arvcf_5end | |||
|id=chr16:18392724..18392736,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.87e-10!50;CL:0000221!7.99e-10!44;CL:0000133!7.99e-10!44;CL:0002319!2.20e-09!43;CL:0000107!2.33e-07!9;CL:0002453!4.20e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,7.48e-20,9;CL:0002453,4.79e-19,8;CL:0000221,1.52e-16,44;CL:0000133,1.52e-16,44;CL:0002319,2.12e-15,43;CL:0000333,6.68e-15,10;CL:0000095,6.68e-15,10;CL:0000243,6.68e-15,10;CL:0000123,6.68e-15,10;CL:0000125,6.68e-15,10;CL:0000030,6.68e-15,10;CL:0000339,6.68e-15,10;CL:0000128,1.09e-14,6;CL:0000126,1.09e-14,6;CL:0000127,1.09e-14,6;CL:0002321,1.68e-09,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.14e-08!102;UBERON:0000924!1.14e-08!102;UBERON:0006601!1.14e-08!102;UBERON:0002410!2.33e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,7.48e-20,9;UBERON:0000010,6.84e-16,11;UBERON:0004121,3.58e-08,95;UBERON:0000924,3.58e-08,95;UBERON:0006601,3.58e-08,95;UBERON:0001017,4.81e-08,73;UBERON:0000013,6.49e-08,3;UBERON:0001016,1.06e-07,75;UBERON:0010313,1.08e-07,3;UBERON:0002342,1.08e-07,3;UBERON:0002005,1.08e-07,3;UBERON:0005428,1.08e-07,3;UBERON:0005062,1.08e-07,3;UBERON:0000011,1.98e-07,3 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0.666219523631325,0.202475267389826,0,0,0,0,0.17008658030214,0.0992909512008853,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0.166234645358492,0,0,0.7813353445238,0,0,0,0.485510353031154,0.503587271902309,0.811015449756117,0.183546752161682,2.34717403304412,18.0960879795771,22.8473630043851,15.3599620268684,6.99932108126813,18.6878333674463,0,0,0,0.514518872071894,1.14613375975503,0,1.41621522601718,0.528990979272033,0.633831403506179,0.677689064138264,0,0,0,0.7104801149461,5.99200221036809,13.4476406862544,0.311068836925433,0.270011876663381,0.630974884054146,0.571301968807607,0,0.61245399607477,0.191690942036473,0,0,0.127687338085188,0.307213066512487,0.527545150920775,0.823388792421687,1.56274011167028,0,0.56276261003168,0.15279824777681,0.883885756421003,0.427115042397309,0.745597783301202,0.075726193333184,0.377857800533928,0.869593466105033,1.72084775396277,0,0,0,0,0.702222100658759,0,0,0,1.12674735821344,0,0,0,0,0,0,0.34255163915718,0,0.29688427812965,0.346970653532272,0.304465478312141,0.230615497256059,0.301445281105245,0.823120949949934,0.753999547978053,0.494389935468748,0.289198713839823,0,0.323533699894818,1.10420759230197,0.484875253135222,0,0,0.83778682725382,0,0,0,0,0.299581278809645,0,0.376963056338593,0,0,0,0.324482526135515,0.203678727700633,0.373220911830279,1.26361379216837,0.631325567659422,0.260240885925407,0.919608417733892,0.540186389416048,0.60281927134286,1.76894897793452,0.896796041993948,1.78033276663485,1.81092359517311,0.215567992932842,0,0,0.219195732427575,0,0.348252166522167,0,0.199034266818493,0,0,0,0.621377317606506,0,1.44049649168812,0.946978942340841,1.37734962223183,0.308534225774757,0.930135779001631,1.3413670069981,0.817357396570186,1.31647879930784,0.164167464079095,0.486412857275134,0.584799949701329,1.09775057645525,0.939444931322602,0.630869845692382,0.514523061896422,0,0.264450566663544,0.213288250535234,0.928946687441754,0.515469845288373,0.201683524623343,0.22237804384487,0,0,0,0.502670417600539,0.198956472041151,0.19496408711912,0.898819408654221,0,0.199141273254367,0.379335801906163,0.228497025219458,0,0.203651327845314,0,0.350679099451593,1.20149420536089,1.91893192373483,0.941992367048249,0.863780147452604,0,0.166845105716094,0.196558995113203,0.224862112384854,0.405720242777006,0.241177159752417,0.25462585178142,0,0.648540907100142,0,0,0.744281895337007,0,0.757736633841335,0.717589654087649,0.482443521363367,0.923765950833023,0,0.162964976442026,0.339490171550376,0.469380496577004,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0.797273843287435,0.983179888294428,1.89953480052485,1.44649058581512,0,0,0.491764273019036,0,0.321101179975584,0.234423373184406,0,1.51482556322624,4.10160685241134,4.29482618726302,4.95473814785438,1.91175038362042,4.23317480756549,2.83076530788832,5.66734982344852,5.55286130031493,5.92931666919785,0.642642632843614,0.141940085208269,0.178065603667255,0,3.62934270539578,0,0,0,0.377210159511796,0.295301892880773,0.614870295887855,0.516856586336442,0.363533729477506,0.356497378384721,0,0,0,0,0.540183282093931,0.776152102696527,0.428674070063185,0.709360934569094,0.713475270408282,0.329098041204242,1.522324745573,2.3467170806371,0.42366414172764,0.441056796109924,0.16488625294148,0.807322133479528,0.422190474497091,0.358117032009409,0,0.291480836629851,0.18542530201051,0.341741761595705,1.44470807574256,1.85194527369712,0,0.27338845544205,0.457556346413045,0.169978429993855,0,0,0,1.26534397432454,0.203319467126849,0.108005340821801,0.418176592028937,0.218362563746178,0.269728692769641,0.165306911450672,0,0.259229946583586,0,0,0.149516546043979,0.330916980914195,0,0,0,0.352071715937262,0.2604087696879,0.104859344425711,0,0.288030006257865,0,0.810900861160657,0.102710957164827,0.129920822977795,0.179026695667481,0.198681354781265,0.240390899039938,0.295379054349154,0,0.15241361331,0.302478555410522,0.0974578807397524,0.192423683280659,0,0,0,0.0897138566094757,0.335769232728157,0,0.563047426353546,0,0.214368379079066,0,0,0,0,0,0,0,0,0.45032120322422,0,0.51776031175182,0.415149390336707,0.399024873401031,0.512200817262403,0.243106717068294,0.209613162627982,0,0,0.618105171716683,0.320919209591815,0.252697211763798,0,0,0.187283014939765,0.320125762024346,0.459483751644906,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0,0.354951612318675,0.238436189947321,0.581385666529314,0.376437521661322,0.338458431566706,0.548783918618318,0,0.407412341537585,0.561142271657738,0.949080144993393,0.29551344712669,0.409231043169689,0.309873682371932,0.385813221962283,0.999242311751784,0.701794825336225,0.429742108096597,0.382576664137687,0.661774257358546,0.463735671240843 | |phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0.666219523631325,0.202475267389826,0,0,0,0,0.17008658030214,0.0992909512008853,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0.166234645358492,0,0,0.7813353445238,0,0,0,0.485510353031154,0.503587271902309,0.811015449756117,0.183546752161682,2.34717403304412,18.0960879795771,22.8473630043851,15.3599620268684,6.99932108126813,18.6878333674463,0,0,0,0.514518872071894,1.14613375975503,0,1.41621522601718,0.528990979272033,0.633831403506179,0.677689064138264,0,0,0,0.7104801149461,5.99200221036809,13.4476406862544,0.311068836925433,0.270011876663381,0.630974884054146,0.571301968807607,0,0.61245399607477,0.191690942036473,0,0,0.127687338085188,0.307213066512487,0.527545150920775,0.823388792421687,1.56274011167028,0,0.56276261003168,0.15279824777681,0.883885756421003,0.427115042397309,0.745597783301202,0.075726193333184,0.377857800533928,0.869593466105033,1.72084775396277,0,0,0,0,0.702222100658759,0,0,0,1.12674735821344,0,0,0,0,0,0,0.34255163915718,0,0.29688427812965,0.346970653532272,0.304465478312141,0.230615497256059,0.301445281105245,0.823120949949934,0.753999547978053,0.494389935468748,0.289198713839823,0,0.323533699894818,1.10420759230197,0.484875253135222,0,0,0.83778682725382,0,0,0,0,0.299581278809645,0,0.376963056338593,0,0,0,0.324482526135515,0.203678727700633,0.373220911830279,1.26361379216837,0.631325567659422,0.260240885925407,0.919608417733892,0.540186389416048,0.60281927134286,1.76894897793452,0.896796041993948,1.78033276663485,1.81092359517311,0.215567992932842,0,0,0.219195732427575,0,0.348252166522167,0,0.199034266818493,0,0,0,0.621377317606506,0,1.44049649168812,0.946978942340841,1.37734962223183,0.308534225774757,0.930135779001631,1.3413670069981,0.817357396570186,1.31647879930784,0.164167464079095,0.486412857275134,0.584799949701329,1.09775057645525,0.939444931322602,0.630869845692382,0.514523061896422,0,0.264450566663544,0.213288250535234,0.928946687441754,0.515469845288373,0.201683524623343,0.22237804384487,0,0,0,0.502670417600539,0.198956472041151,0.19496408711912,0.898819408654221,0,0.199141273254367,0.379335801906163,0.228497025219458,0,0.203651327845314,0,0.350679099451593,1.20149420536089,1.91893192373483,0.941992367048249,0.863780147452604,0,0.166845105716094,0.196558995113203,0.224862112384854,0.405720242777006,0.241177159752417,0.25462585178142,0,0.648540907100142,0,0,0.744281895337007,0,0.757736633841335,0.717589654087649,0.482443521363367,0.923765950833023,0,0.162964976442026,0.339490171550376,0.469380496577004,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0.797273843287435,0.983179888294428,1.89953480052485,1.44649058581512,0,0,0.491764273019036,0,0.321101179975584,0.234423373184406,0,1.51482556322624,4.10160685241134,4.29482618726302,4.95473814785438,1.91175038362042,4.23317480756549,2.83076530788832,5.66734982344852,5.55286130031493,5.92931666919785,0.642642632843614,0.141940085208269,0.178065603667255,0,3.62934270539578,0,0,0,0.377210159511796,0.295301892880773,0.614870295887855,0.516856586336442,0.363533729477506,0.356497378384721,0,0,0,0,0.540183282093931,0.776152102696527,0.428674070063185,0.709360934569094,0.713475270408282,0.329098041204242,1.522324745573,2.3467170806371,0.42366414172764,0.441056796109924,0.16488625294148,0.807322133479528,0.422190474497091,0.358117032009409,0,0.291480836629851,0.18542530201051,0.341741761595705,1.44470807574256,1.85194527369712,0,0.27338845544205,0.457556346413045,0.169978429993855,0,0,0,1.26534397432454,0.203319467126849,0.108005340821801,0.418176592028937,0.218362563746178,0.269728692769641,0.165306911450672,0,0.259229946583586,0,0,0.149516546043979,0.330916980914195,0,0,0,0.352071715937262,0.2604087696879,0.104859344425711,0,0.288030006257865,0,0.810900861160657,0.102710957164827,0.129920822977795,0.179026695667481,0.198681354781265,0.240390899039938,0.295379054349154,0,0.15241361331,0.302478555410522,0.0974578807397524,0.192423683280659,0,0,0,0.0897138566094757,0.335769232728157,0,0.563047426353546,0,0.214368379079066,0,0,0,0,0,0,0,0,0.45032120322422,0,0.51776031175182,0.415149390336707,0.399024873401031,0.512200817262403,0.243106717068294,0.209613162627982,0,0,0.618105171716683,0.320919209591815,0.252697211763798,0,0,0.187283014939765,0.320125762024346,0.459483751644906,0,0.115884325944855,0.192909220463705,0.412085900803307,0,0,0.354951612318675,0.238436189947321,0.581385666529314,0.376437521661322,0.338458431566706,0.548783918618318,0,0.407412341537585,0.561142271657738,0.949080144993393,0.29551344712669,0.409231043169689,0.309873682371932,0.385813221962283,0.999242311751784,0.701794825336225,0.429742108096597,0.382576664137687,0.661774257358546,0.463735671240843 | ||
|short_description=p3@Arvcf | |||
}} | }} |
Latest revision as of 17:06, 1 October 2015
Short description: | p3@Arvcf |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Arvcf_5end |
Coexpression cluster: | MCL_coexpression_mm9:310 |
Association with transcript: | 42bp_to_ENSMUST00000115610_5end |
EntrezGene: | Arvcf |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 7.48e-20 | 9 |
oligodendrocyte precursor cell | 4.79e-19 | 8 |
ectodermal cell | 1.52e-16 | 44 |
neurectodermal cell | 1.52e-16 | 44 |
neural cell | 2.12e-15 | 43 |
migratory neural crest cell | 6.68e-15 | 10 |
neuron associated cell | 6.68e-15 | 10 |
glial cell (sensu Vertebrata) | 6.68e-15 | 10 |
neuron associated cell (sensu Vertebrata) | 6.68e-15 | 10 |
glial cell | 6.68e-15 | 10 |
glioblast | 6.68e-15 | 10 |
glioblast (sensu Vertebrata) | 6.68e-15 | 10 |
oligodendrocyte | 1.09e-14 | 6 |
macroglial cell | 1.09e-14 | 6 |
astrocyte | 1.09e-14 | 6 |
embryonic cell | 1.68e-09 | 70 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 7.48e-20 | 9 |
peripheral nervous system | 6.84e-16 | 11 |
ectoderm-derived structure | 3.58e-08 | 95 |
ectoderm | 3.58e-08 | 95 |
presumptive ectoderm | 3.58e-08 | 95 |
central nervous system | 4.81e-08 | 73 |
sympathetic nervous system | 6.49e-08 | 3 |
nervous system | 1.06e-07 | 75 |
neural crest-derived structure | 1.08e-07 | 3 |
neural crest | 1.08e-07 | 3 |
enteric nervous system | 1.08e-07 | 3 |
vagal neural crest | 1.08e-07 | 3 |
neural fold | 1.08e-07 | 3 |
parasympathetic nervous system | 1.98e-07 | 3 |