FFCP PHASE1:Mm9::chr16:28274394..28274399,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=93 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:28274394..28274399,- | |||
|description=CAGE_peak_at_chr16:28274394..28274399,- | |||
|id=chr16:28274394..28274399,- | |||
|ontology_enrichment_celltype=CL:0000117!1.81e-07!23;CL:0000337!1.81e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,2.36e-07,3;CL:0002610,5.92e-07,3;CL:0000117,9.65e-07,23;CL:0000337,9.65e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.33e-15!52;UBERON:0005068!1.33e-15!52;UBERON:0006241!1.33e-15!52;UBERON:0007135!1.33e-15!52;UBERON:0000955!9.21e-15!50;UBERON:0006238!9.21e-15!50;UBERON:0001017!2.13e-14!73;UBERON:0005743!2.13e-14!73;UBERON:0000033!2.15e-14!63;UBERON:0000073!3.70e-14!75;UBERON:0001016!3.70e-14!75;UBERON:0002346!5.03e-14!71;UBERON:0003075!5.03e-14!71;UBERON:0007284!5.03e-14!71;UBERON:0002616!6.22e-14!49;UBERON:0002020!2.96e-13!34;UBERON:0003056!6.91e-12!49;UBERON:0002791!2.37e-11!29;UBERON:0003528!2.37e-11!29;UBERON:0001893!2.37e-11!29;UBERON:0000025!3.92e-11!114;UBERON:0004121!5.18e-11!102;UBERON:0000924!5.18e-11!102;UBERON:0006601!5.18e-11!102;UBERON:0003080!2.62e-10!40;UBERON:0004111!3.11e-10!122;UBERON:0002780!9.46e-10!39;UBERON:0001890!9.46e-10!39;UBERON:0006240!9.46e-10!39;UBERON:0002021!1.09e-09!10;UBERON:0000411!1.09e-09!10;UBERON:0001950!1.09e-09!10;UBERON:0000153!2.98e-08!94;UBERON:0000956!4.25e-08!21;UBERON:0001869!4.25e-08!21;UBERON:0000203!4.25e-08!21;UBERON:0007811!8.27e-08!86;UBERON:0002619!2.28e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,6.93e-12,10;UBERON:0000411,6.93e-12,10;UBERON:0001950,6.93e-12,10;UBERON:0000073,8.57e-11,54;UBERON:0001017,1.47e-10,73;UBERON:0001016,3.22e-10,75;UBERON:0004121,7.51e-09,95;UBERON:0000924,7.51e-09,95;UBERON:0006601,7.51e-09,95;UBERON:0002020,5.83e-08,34;UBERON:0001049,9.81e-08,52;UBERON:0005068,9.81e-08,52;UBERON:0006241,9.81e-08,52;UBERON:0007135,9.81e-08,52;UBERON:0002257,2.36e-07,3;UBERON:0002346,2.74e-07,64;UBERON:0003075,2.74e-07,64;UBERON:0007284,2.74e-07,64;UBERON:0000955,4.72e-07,47;UBERON:0006238,4.72e-07,47;UBERON:0004684,5.92e-07,3;UBERON:0002275,5.92e-07,3;UBERON:0002619,6.49e-07,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0,0.210324961351382,0.571301968807607,0,0.244981598429908,0,0,0,1.53224805702225,1.22885226604995,0,0.182975287204819,0.52091337055676,0.837548997004143,1.12552522006336,0.916789486660861,2.65165726926301,1.56608848879013,0.186399445825301,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,2.34224637609238,2.09446706813455,0,0,0,0,0.449371918214468,0.915001205637253,0.125654352112864,0.869121600961382,1.27857728665165,0.20778804455956,0.811206315338788,0.203678727700633,0,3.0326731012041,0,0,0,0.180062129805349,0.90422890701429,0.340182495756639,0.2562274405697,0.374806898238915,1.03481348295606,0,0.189106080167819,0,0,1.39023624612799,0.348252166522167,0.205782136407943,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0.196764231747404,0.462801338662135,0.232533944750408,0.804820204198858,0.350296027101508,0.493679549740441,0.164167464079095,0.0810688095458557,0.292399974850665,0,0.268412837520744,0.420579897128254,0.308713837137853,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.189709611372772,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0.312037673114561,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0,0,0.195133647857799,0.157635144106191,0.664394068946325,0.318909537314974,0,0,0.144649058581512,0,0,0,0,0.481651769963376,0.937693492737625,0,0,0,0,0.215423397732799,0,0,0,0,0,0.395287777946524,4.4984984299053,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0,0,0.428674070063185,0,0.178368817602071,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0.259229946583586,0,0,0,0,0.194451188344048,0,0,0.234714477291508,0.13020438484395,0.104859344425711,0,0,0,0,0.308132871494482,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0.214368379079066,0,1.6942555278512,1.84130094602871,0.572895513439397,2.92150409984269,0.685082519770642,1.5107877947794,0.675022500231806,1.80128481289688,0.906284817968409,0.51776031175182,0,0.399024873401031,0.170733605754134,0.243106717068294,0,0,0,0.618105171716683,0,0,0,0.188626341386076,0,0.128050304809739,0.114870937911227,0,0.347652977834566,0,0,0.147198920134397,0,0,0,0.290692833264657,0.376437521661322,0.0846146078916765,0,0.263069711437843,0.271608227691724,0,0.237270036248348,0,0,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.05798195854407,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0,0.210324961351382,0.571301968807607,0,0.244981598429908,0,0,0,1.53224805702225,1.22885226604995,0,0.182975287204819,0.52091337055676,0.837548997004143,1.12552522006336,0.916789486660861,2.65165726926301,1.56608848879013,0.186399445825301,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,2.34224637609238,2.09446706813455,0,0,0,0,0.449371918214468,0.915001205637253,0.125654352112864,0.869121600961382,1.27857728665165,0.20778804455956,0.811206315338788,0.203678727700633,0,3.0326731012041,0,0,0,0.180062129805349,0.90422890701429,0.340182495756639,0.2562274405697,0.374806898238915,1.03481348295606,0,0.189106080167819,0,0,1.39023624612799,0.348252166522167,0.205782136407943,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0.196764231747404,0.462801338662135,0.232533944750408,0.804820204198858,0.350296027101508,0.493679549740441,0.164167464079095,0.0810688095458557,0.292399974850665,0,0.268412837520744,0.420579897128254,0.308713837137853,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.189709611372772,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0.312037673114561,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0,0,0.195133647857799,0.157635144106191,0.664394068946325,0.318909537314974,0,0,0.144649058581512,0,0,0,0,0.481651769963376,0.937693492737625,0,0,0,0,0.215423397732799,0,0,0,0,0,0.395287777946524,4.4984984299053,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0,0,0.428674070063185,0,0.178368817602071,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0.259229946583586,0,0,0,0,0.194451188344048,0,0,0.234714477291508,0.13020438484395,0.104859344425711,0,0,0,0,0.308132871494482,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0.214368379079066,0,1.6942555278512,1.84130094602871,0.572895513439397,2.92150409984269,0.685082519770642,1.5107877947794,0.675022500231806,1.80128481289688,0.906284817968409,0.51776031175182,0,0.399024873401031,0.170733605754134,0.243106717068294,0,0,0,0.618105171716683,0,0,0,0.188626341386076,0,0.128050304809739,0.114870937911227,0,0.347652977834566,0,0,0.147198920134397,0,0,0,0.290692833264657,0.376437521661322,0.0846146078916765,0,0.263069711437843,0.271608227691724,0,0.237270036248348,0,0,0.154936841185966,0.192906610981141,0,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr16:28274394..28274399,- | |||
}} | }} |
Latest revision as of 06:33, 6 August 2015
Short description: | p@chr16:28274394..28274399, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:28274394..28274399, - |
Coexpression cluster: | MCL_coexpression_mm9:93 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 2.36e-07 | 3 |
raphe nuclei neuron | 5.92e-07 | 3 |
CNS neuron (sensu Vertebrata) | 9.65e-07 | 23 |
neuroblast (sensu Vertebrata) | 9.65e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 6.93e-12 | 10 |
visual cortex | 6.93e-12 | 10 |
neocortex | 6.93e-12 | 10 |
regional part of nervous system | 8.57e-11 | 54 |
central nervous system | 1.47e-10 | 73 |
nervous system | 3.22e-10 | 75 |
ectoderm-derived structure | 7.51e-09 | 95 |
ectoderm | 7.51e-09 | 95 |
presumptive ectoderm | 7.51e-09 | 95 |
gray matter | 5.83e-08 | 34 |
neural tube | 9.81e-08 | 52 |
neural rod | 9.81e-08 | 52 |
future spinal cord | 9.81e-08 | 52 |
neural keel | 9.81e-08 | 52 |
ventral horn of spinal cord | 2.36e-07 | 3 |
neurectoderm | 2.74e-07 | 64 |
neural plate | 2.74e-07 | 64 |
presumptive neural plate | 2.74e-07 | 64 |
brain | 4.72e-07 | 47 |
future brain | 4.72e-07 | 47 |
raphe nuclei | 5.92e-07 | 3 |
reticular formation | 5.92e-07 | 3 |
regional part of cerebral cortex | 6.49e-07 | 17 |