FFCP PHASE1:Mm9::chr18:35278534..35278557,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr18:35278534..35278557,+ to FFCP PHASE1:Mm9::chr18:35278534..35278557,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=12385 | |EntrezGene=12385 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3134 | |||
|TSSclassifier=NA | |||
|UniProt=P26231 | |UniProt=P26231 | ||
|association_with_transcript=0bp_to_ENSMUST00000042345_5end | |||
|cluster_id=chr18:35278534..35278557,+ | |||
|description=CAGE_peak_2_at_Ctnna1_5end | |||
|id=chr18:35278534..35278557,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.59e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.59e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!1.85e-10!23;UBERON:0001009!1.85e-10!23;UBERON:0007100!8.84e-10!18;UBERON:0000948!8.84e-10!18;UBERON:0005498!8.84e-10!18;UBERON:0004140!8.84e-10!18;UBERON:0009881!8.84e-10!18;UBERON:0004141!8.84e-10!18;UBERON:0003084!8.84e-10!18;UBERON:0007005!8.84e-10!18;UBERON:0004139!8.84e-10!18;UBERON:0004291!8.84e-10!18;UBERON:0004872!2.30e-08!33;UBERON:0003103!2.74e-08!43;UBERON:0000344!6.22e-08!15;UBERON:0005178!7.04e-08!17;UBERON:0005181!7.04e-08!17;UBERON:0002224!7.04e-08!17;UBERON:0000915!7.04e-08!17;UBERON:0008947!7.04e-08!17;UBERON:0003258!7.04e-08!17;UBERON:0001242!5.76e-07!13;UBERON:0000060!5.76e-07!13;UBERON:0001262!5.76e-07!13;UBERON:0004786!5.76e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.85e-10,23;UBERON:0001009,1.85e-10,23;UBERON:0000160,5.41e-10,31;UBERON:0007100,8.84e-10,18;UBERON:0000948,8.84e-10,18;UBERON:0005498,8.84e-10,18;UBERON:0004140,8.84e-10,18;UBERON:0009881,8.84e-10,18;UBERON:0004141,8.84e-10,18;UBERON:0003084,8.84e-10,18;UBERON:0007005,8.84e-10,18;UBERON:0004139,8.84e-10,18;UBERON:0004291,8.84e-10,18;UBERON:0005409,8.36e-09,47;UBERON:0004872,2.30e-08,33;UBERON:0003103,2.74e-08,43;UBERON:0000344,6.22e-08,15;UBERON:0005178,7.04e-08,17;UBERON:0005181,7.04e-08,17;UBERON:0002224,7.04e-08,17;UBERON:0000915,7.04e-08,17;UBERON:0008947,7.04e-08,17;UBERON:0003258,7.04e-08,17;UBERON:0001242,5.76e-07,13;UBERON:0001262,5.76e-07,13;UBERON:0004786,5.76e-07,13 | |||
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| |phase1_expression=15.0539916278506,54.091188184101,55.0549079661339,45.6720959073313,46.0824071550639,34.4152507419374,29.2015800744407,1.93684985162364,4.08287294239834,0.468129052643987,3.76679530096111,1.83475965689274,3.42401459862411,0.524522414513984,11.6588416635482,11.5410902412201,15.3903613188192,4.88966356305268,4.52477630898938,2.97072756258621,19.9851731855014,7.64540324246817,10.7091913546964,40.1580981211451,36.0172571275457,51.1066448062368,42.6454376197484,48.481027354325,49.5961124781136,52.9263272495855,35.2551511941934,5.08024538767705,5.53558308826113,0,24.8412392986096,26.4313086120003,24.908661464009,15.4856703372656,22.6587249911902,13.088093599345,14.1175557127443,10.9287277593351,15.0508209439658,22.2837367816772,25.3442328048786,31.3864946196475,10.9534788208725,22.2385659508055,21.7489320907127,36.5528210259653,27.5773250601964,12.9377307928474,5.36904339384756,3.62681071005672,3.6970317905671,48.622033410794,41.260815351181,45.3791441204149,4.65327859977075,6.87688273053643,3.80298842103708,19.3141383279405,13.3394219416671,8.09909745553259,9.88866362566974,4.2628806896766,8.08920298399693,11.1423308543251,9.64313394468842,12.0155285115205,12.4091727197315,4.57041575046086,9.93908434282261,10.0442455356262,14.4726661237537,11.0306254393203,7.70811166995721,7.66124028511126,9.21639199537461,6.06676923558892,4.94033275453012,6.25096044668112,3.62937898701795,5.6276261003168,11.4598685832608,8.2496003932627,9.25415925194169,5.21918448310842,70.6525383798607,68.694548137068,55.0742528533188,19.7897491705719,14.2793980078628,16.7307989407723,23.3919510281161,21.9533174677694,14.0444420131752,39.5398348381094,35.590682630593,30.0338638333789,22.5349471642689,29.5150898052931,17.8363667794652,7.11066703153331,69.4936241645997,66.1269248890007,63.6960800718627,20.4389144697117,15.018397251536,18.5552673831031,17.868988656912,13.3964810457342,19.832932764021,16.2780451796832,19.2845479702556,22.6199864393416,58.832402320781,15.9059292611903,7.96149496754887,17.3090529443728,14.3546986999256,12.1218813283806,7.45567044872489,2.92780797011547,3.35114730901528,22.2247638031475,15.8155964347815,8.39863823390771,12.0716715719411,3.74476598512057,7.77751024791665,2.26177833803156,3.99795936442236,3.3243009452943,4.1557608911912,5.353961681236,23.5248930494231,17.7901967972433,16.6797020566225,16.8353484709179,18.9975846725547,16.7828536236435,17.6460887209242,14.1662528765572,18.0296722751019,11.914575986491,15.4607845523553,10.3481348295606,25.2214551731425,20.0452444977888,14.9558455539357,18.4124415239163,19.4633074457919,20.1986256582857,20.1666493679785,20.8985980159418,9.12877143507205,9.00717674901503,8.52490498186778,28.1691050648283,25.5633405379395,29.5301780796064,32.9075182463442,32.4660982383216,40.4179835764931,38.8331687733181,49.8988526603292,64.3377036443104,49.5325148239576,42.3552057324066,39.0751662011025,35.3803969569304,31.8347667172023,36.6383523215815,5.46753866266731,5.9684675179985,30.3985280345094,29.3540128996534,23.0351310578053,23.6881405297647,26.8044319549954,26.8239087749046,24.6839628667806,21.6857213768317,31.7934471234823,26.1871338011177,26.6415321328286,28.2518190298434,23.9805827156518,35.9527763461689,28.962498683209,32.2608862672075,20.2944654019797,22.3927084715069,21.4144697778853,22.8089487186752,24.6319658702885,29.1765010743725,28.9623340029098,23.7652338247159,23.7068079040476,21.8412980141587,13.3403682189217,15.8502850430289,12.7763346823582,11.0182435068578,15.0116489827492,10.3706178693539,9.67578236769395,14.0971107350897,16.3756579042786,14.0026320725922,12.9391385874619,14.5134969590716,11.2333562321242,13.3866805311969,17.0427542845817,18.332853811808,41.1999614071528,18.759649765278,27.7040459951444,25.292017780503,23.2343345805617,35.6788328351068,33.5641533649279,48.0028773730185,36.2560831444239,27.4616215164481,39.7042373957143,32.4449363137161,34.0189414275814,30.9548985364435,16.5870412333199,27.7391898747542,10.8188140064188,14.6246475541508,5.61927064957272,6.32943107597897,16.8852993737976,12.876017287423,23.6631164562193,19.9123759591286,23.6965737506079,33.2166629154047,33.6425997864415,38.2153316564924,26.717506310543,23.9649803487276,32.0183100136684,5.78378369559253,24.5556347410305,15.8478387263857,24.7588178217436,18.6416238958965,9.2921596837974,15.0523994416088,16.9301191900261,13.7681708221806,11.5167738223501,21.213025208131,20.6742634534577,15.2684166380552,14.6163925137736,12.6414703174326,10.5418608574999,14.4389760547462,17.0219802876894,19.9867814374754,15.1349660025823,17.7899739076222,20.0394464015769,23.5446839234733,18.7585883486418,15.22324745573,32.6193674208557,42.1545821019002,21.8323114074412,27.7008904941686,24.8655217111695,25.5726801695381,23.7550964566242,19.8610488691524,33.8117770490627,7.41701208042039,11.4483490134561,24.9728110235499,15.7415348264255,13.3741604473331,10.66214976224,9.15112692826091,12.4084253895514,13.9951452323658,11.4705978257672,15.2747298882418,21.9853515538889,24.8049749894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| ||
|short_description=p2@Ctnna1 | |||
}} | }} |
Latest revision as of 04:37, 27 September 2015
Short description: | p2@Ctnna1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ctnna1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3134 |
Association with transcript: | 0bp_to_ENSMUST00000042345_5end |
EntrezGene: | Ctnna1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.59e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 1.85e-10 | 23 |
circulatory system | 1.85e-10 | 23 |
intestine | 5.41e-10 | 31 |
primary circulatory organ | 8.84e-10 | 18 |
heart | 8.84e-10 | 18 |
primitive heart tube | 8.84e-10 | 18 |
primary heart field | 8.84e-10 | 18 |
anterior lateral plate mesoderm | 8.84e-10 | 18 |
heart tube | 8.84e-10 | 18 |
heart primordium | 8.84e-10 | 18 |
cardiac mesoderm | 8.84e-10 | 18 |
cardiogenic plate | 8.84e-10 | 18 |
heart rudiment | 8.84e-10 | 18 |
gastrointestinal system | 8.36e-09 | 47 |
splanchnic layer of lateral plate mesoderm | 2.30e-08 | 33 |
compound organ | 2.74e-08 | 43 |
mucosa | 6.22e-08 | 15 |
thoracic cavity element | 7.04e-08 | 17 |
thoracic segment organ | 7.04e-08 | 17 |
thoracic cavity | 7.04e-08 | 17 |
thoracic segment of trunk | 7.04e-08 | 17 |
respiratory primordium | 7.04e-08 | 17 |
endoderm of foregut | 7.04e-08 | 17 |
intestinal mucosa | 5.76e-07 | 13 |
wall of intestine | 5.76e-07 | 13 |
gastrointestinal system mucosa | 5.76e-07 | 13 |