FFCP PHASE1:Mm9::chr1:135220540..135220544,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr1:135220540..135220544,+ to FFCP PHASE1:Mm9::chr1:135220540..135220544,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1541 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:135220540..135220544,+ | |||
|description=CAGE_peak_at_chr1:135220540..135220544,+ | |||
|id=chr1:135220540..135220544,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,3.66e-13,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!2.22e-13!14;UBERON:0000117!2.22e-13!14;UBERON:0000171!2.22e-13!14;UBERON:0000170!2.22e-13!14;UBERON:0005597!2.22e-13!14;UBERON:0000118!2.22e-13!14;UBERON:0005153!1.36e-10!17;UBERON:0005178!1.36e-10!17;UBERON:0005181!1.36e-10!17;UBERON:0002224!1.36e-10!17;UBERON:0000915!1.36e-10!17;UBERON:0008947!1.36e-10!17;UBERON:0003258!1.36e-10!17;UBERON:0000310!1.87e-08!6;UBERON:0001443!1.87e-08!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,2.12e-22,14;UBERON:0000117,2.12e-22,14;UBERON:0000171,2.12e-22,14;UBERON:0000170,2.12e-22,14;UBERON:0005597,2.12e-22,14;UBERON:0000118,2.12e-22,14;UBERON:0005153,1.88e-18,17;UBERON:0005178,1.88e-18,17;UBERON:0005181,1.88e-18,17;UBERON:0002224,1.88e-18,17;UBERON:0000915,1.88e-18,17;UBERON:0008947,1.88e-18,17;UBERON:0003258,1.88e-18,17;UBERON:0005157,1.11e-15,20;UBERON:0002038,3.66e-13,3;UBERON:0009663,3.66e-13,3;UBERON:0009661,3.66e-13,3;UBERON:0000125,3.66e-13,3;UBERON:0002308,3.66e-13,3;UBERON:0002420,1.20e-10,8;UBERON:0007245,1.20e-10,8;UBERON:0010009,1.20e-10,8;UBERON:0010011,1.20e-10,8;UBERON:0000454,1.20e-10,8;UBERON:0002950,4.16e-10,4;UBERON:0001891,4.16e-10,4;UBERON:0009616,4.16e-10,4;UBERON:0010286,4.16e-10,4;UBERON:0000065,1.38e-07,41;UBERON:0001004,2.11e-07,42;UBERON:0000025,3.40e-07,114;UBERON:0000310,9.13e-07,6;UBERON:0001443,9.13e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274462930807229,1.04182674111352,0,5.6276261003168,2.75036845998258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,1.51633655060205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0.380451252225118,0.474529061544512,0.494096864172033,0.502670417600539,0.198956472041151,0.779856348476481,0,0,0,0,0.114248512609729,0,0.407302655690628,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0.189491411770485,0.977789858652155,0.848725428875941,1.17345124144251,2.1775813467436,1.90434912708811,0.975668239288994,1.41871629695572,1.7717175171902,1.91345722388985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0.608929898229199,0.23467170806371,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0,0,0,0,0.412085900803307,0.441596760403192,0.342869252385415,0.177475806159338,0,0,0,0.0846146078916765,0,0.263069711437843,0,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274462930807229,1.04182674111352,0,5.6276261003168,2.75036845998258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,1.51633655060205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0.380451252225118,0.474529061544512,0.494096864172033,0.502670417600539,0.198956472041151,0.779856348476481,0,0,0,0,0.114248512609729,0,0.407302655690628,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0.189491411770485,0.977789858652155,0.848725428875941,1.17345124144251,2.1775813467436,1.90434912708811,0.975668239288994,1.41871629695572,1.7717175171902,1.91345722388985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0.608929898229199,0.23467170806371,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0,0,0,0.0640251524048693,0,0,0,0,0.412085900803307,0.441596760403192,0.342869252385415,0.177475806159338,0,0,0,0.0846146078916765,0,0.263069711437843,0,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0 | ||
|short_description=p@chr1:135220540..135220544,+ | |||
}} | }} |
Latest revision as of 19:25, 4 August 2015
Short description: | p@chr1:135220540..135220544, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:135220540..135220544, + |
Coexpression cluster: | MCL_coexpression_mm9:1541 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 3.66e-13 | 3 |
Ontology term | p-value | n |
---|---|---|
lung | 2.12e-22 | 14 |
respiratory tube | 2.12e-22 | 14 |
respiration organ | 2.12e-22 | 14 |
pair of lungs | 2.12e-22 | 14 |
lung primordium | 2.12e-22 | 14 |
lung bud | 2.12e-22 | 14 |
epithelial bud | 1.88e-18 | 17 |
thoracic cavity element | 1.88e-18 | 17 |
thoracic segment organ | 1.88e-18 | 17 |
thoracic cavity | 1.88e-18 | 17 |
thoracic segment of trunk | 1.88e-18 | 17 |
respiratory primordium | 1.88e-18 | 17 |
endoderm of foregut | 1.88e-18 | 17 |
epithelial fold | 1.11e-15 | 20 |
substantia nigra | 3.66e-13 | 3 |
telencephalic nucleus | 3.66e-13 | 3 |
midbrain nucleus | 3.66e-13 | 3 |
neural nucleus | 3.66e-13 | 3 |
nucleus of brain | 3.66e-13 | 3 |
basal ganglion | 1.20e-10 | 8 |
nuclear complex of neuraxis | 1.20e-10 | 8 |
aggregate regional part of brain | 1.20e-10 | 8 |
collection of basal ganglia | 1.20e-10 | 8 |
cerebral subcortex | 1.20e-10 | 8 |
regional part of midbrain | 4.16e-10 | 4 |
midbrain | 4.16e-10 | 4 |
presumptive midbrain | 4.16e-10 | 4 |
midbrain neural tube | 4.16e-10 | 4 |
respiratory tract | 1.38e-07 | 41 |
respiratory system | 2.11e-07 | 42 |
tube | 3.40e-07 | 114 |
breast | 9.13e-07 | 6 |
chest | 9.13e-07 | 6 |