FFCP PHASE1:Mm9::chr5:134789543..134789566,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr5:134789543..134789566,+ to FFCP PHASE1:Mm9::chr5:134789543..134789566,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=231 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:134789543..134789566,+ | |||
|description=CAGE_peak_at_chr5:134789543..134789566,+ | |||
|id=chr5:134789543..134789566,+ | |||
|ontology_enrichment_celltype=CL:0000791!3.79e-07!9;CL:0000789!3.79e-07!9;CL:0002420!3.79e-07!9;CL:0002419!3.79e-07!9;CL:0000790!3.79e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.56e-09,9;CL:0000789,7.56e-09,9;CL:0002420,7.56e-09,9;CL:0002419,7.56e-09,9;CL:0000790,7.56e-09,9;CL:0000624,5.77e-08,8;CL:0000084,1.82e-07,11;CL:0000827,1.82e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002368,4.75e-08,60;UBERON:0003408,6.54e-08,24;UBERON:0002530,1.03e-07,65;UBERON:0003929,1.06e-07,55;UBERON:0002370,2.83e-07,23;UBERON:0000974,2.83e-07,23;UBERON:0004807,2.83e-07,23;UBERON:0005058,2.83e-07,23;UBERON:0003351,2.83e-07,23;UBERON:0009113,2.83e-07,23;UBERON:0003295,2.83e-07,23;UBERON:0009722,2.83e-07,23;UBERON:0005562,2.83e-07,23;UBERON:0007690,2.83e-07,23;UBERON:0005911,5.47e-07,69 | |||
|phase1_expression=0.480446541314382,3.14077866875425,1.36499771816861,3.93203474698879,3.50627010962443,1.34303417529512,1.16806320297763,2.84071311571468,7.74337971834167,14.0438715793196,3.4243593645101,2.71225340584144,4.62241970814255,4.10875891369288,0.333109761815663,0.202475267389826,0,0.788655413395594,0.411343300817216,0.84877930359606,0.850432901510698,0.893618560807968,1.04479915655574,0.47997726838022,0.45881856213434,2.29692785646008,2.15380998079537,0.646413698057667,0.570070258369122,0,0.665191531965914,1.90509202037889,6.1506478758457,0,3.46621943701529,0.997407872150954,4.28755648150975,0,1.5626706890476,2.09409497589519,0,0.683045484958446,1.45653105909346,0.251793635951155,0.101376931219515,0,0,0.436050312760893,0.659058548203415,1.36100929351998,0.839918529752175,0,0.503347818173209,4.35217285206807,7.73015738027667,0,0.286533439938757,0,0,0.528990979272033,1.26766280701236,0.338844532069132,0,0.449949858640699,2.96659908770092,0,0.599200221036809,0.384218305321555,0.207379224616955,0.675029691658453,0.420649922702764,0.856952953211411,0.662605622854841,0.489963196859816,1.0543001812006,0,0,0.766124028511126,1.0752457327937,0.527545150920775,0.823388792421687,0.52091337055676,0.837548997004143,0,1.06958773443767,0,0.711858403995515,0.745597783301202,0,0.302286240427142,15.9425468785923,0,1.3599426674155,0,0,2.24013443548668,0.421333260395256,1.02258193546835,1.29893002301434,0,0.422530259330042,0,0,0,0,0.760079596425296,1.01104889002957,0.5709193985953,2.84831672011889,1.63286352971307,1.04091196059682,1.52232739156071,0.922461989024234,1.20578112442098,0.23517741427141,0.628332956648377,0.247194967734374,1.3013942122792,0,0.485300549842228,1.98757366614354,0.969750506270444,0,1.17112318804619,1.8850203613211,0.510914110417183,2.51611761462433,2.99951365496704,1.01656181658452,0.898743836428936,0.457500602818626,0,0.869121600961382,1.02286182932132,1.0389402227978,0.811206315338788,0.305518091550949,0.995255764880744,1.51633655060205,1.05220927943237,0.910843100738926,0.919608417733892,0.720248519221397,0.30140963567143,0.816437989815934,0.640568601424249,0.562210347358373,0.776110112217047,2.58681591519411,1.70195472151037,1.23165786914764,0.219195732427575,0.834141747676794,1.74126083261083,1.85203922767149,0.796137067273973,1.40442637462647,3.60287069960601,1.13665399758237,0.828503090142008,0.234526059981096,0.900310307305074,0.473489471170421,0.393528463494808,0.154267112887378,0.697601834251224,0.268273401399619,0.817357396570186,0.658239399653922,0.492502392237286,0.56748166682099,0.730999937126662,1.75640092232841,0.402619256281115,0.420579897128254,0.308713837137853,0,0.264450566663544,1.2797295032114,1.39342003116263,0.38660238396628,0.201683524623343,1.11189021922435,0.760902504450237,0,0.164698954724011,0.251335208800269,0,0.58489226135736,0,0.216138049874694,0.597423819763102,0.189667900953082,1.82797620175566,0,1.4255592949172,1.35766741017338,0.631222379012867,0.632365371242573,0.295220295959204,0.941992367048249,1.35736880313981,0.296452627087149,0.500535317148282,0.196558995113203,0.224862112384854,0.608580364165509,0.72353147925725,0,0.863088412352432,0.324270453550071,1.09824565275233,4.31304619582064,1.11642284300551,2.49630138491648,1.26289438973556,0.717589654087649,1.4473305640901,0.739012760666419,0.757965647081939,0.325929952884052,0.339490171550376,0.704070744865506,1.67506257441816,2.38043640886014,1.36593553500459,1.7339865851681,0.8858587585951,0.478364305972461,1.47476983244164,0.863424909329478,1.01254341007058,3.01582567878545,3.80733978673097,0,1.10374698521893,0.642202359951168,0.820481806145422,0.163934945376675,0.252470927204373,1.26203287766503,0.780877488593277,1.07711698866399,0.716906393857656,1.55959071857676,1.13230612315533,1.21443210502468,0.584511715822624,1.97643888973262,0.963963949265421,1.84522110770749,0.890328018336276,0.162886959353576,0.494910368917606,1.32745138339963,0.728341908464944,0.604647113929502,0.377210159511796,0.885905678642318,0.922305443831782,0.516856586336442,0,0,2.21225730555071,0,0,2.04263763452273,1.44048875225048,2.19909762430683,1.71469628025274,2.12808280370728,1.78368817602071,1.64549020602121,1.8267896946876,0.469343416127421,0,0.882113592219848,3.2977250588296,0.968786560175433,1.56813604813205,1.19372344003136,2.1338316966858,0.874442509889552,1.29797711407357,0.512612642393558,0.412773735926445,1.29636169158798,0.941842285023455,0.546776910884101,0.457556346413045,1.5298058699447,1.39951452323658,2.3493995546752,0,0.316335993581135,0.203319467126849,0.756037385752609,1.25452977608681,1.31017538247707,1.07891477107857,0.330613822901344,0.785267825952089,0.518459893167171,3.10669656543463,0.56369293868419,0.448549638131936,0.165458490457098,0.583353565032143,0.774958940866387,0.506868376472335,0.704143431874524,1.0416350787516,0.734015410979976,0.483168241652012,0.576060012515731,1.89606672376907,1.82452693761148,1.02710957164827,0.909445760844565,2.8644271306797,3.17890167650024,0.841368146639782,2.0676533804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| |phase1_expression=0.480446541314382,3.14077866875425,1.36499771816861,3.93203474698879,3.50627010962443,1.34303417529512,1.16806320297763,2.84071311571468,7.74337971834167,14.0438715793196,3.4243593645101,2.71225340584144,4.62241970814255,4.10875891369288,0.333109761815663,0.202475267389826,0,0.788655413395594,0.411343300817216,0.84877930359606,0.850432901510698,0.893618560807968,1.04479915655574,0.47997726838022,0.45881856213434,2.29692785646008,2.15380998079537,0.646413698057667,0.570070258369122,0,0.665191531965914,1.90509202037889,6.1506478758457,0,3.46621943701529,0.997407872150954,4.28755648150975,0,1.5626706890476,2.09409497589519,0,0.683045484958446,1.45653105909346,0.251793635951155,0.101376931219515,0,0,0.436050312760893,0.659058548203415,1.36100929351998,0.839918529752175,0,0.503347818173209,4.35217285206807,7.73015738027667,0,0.286533439938757,0,0,0.528990979272033,1.26766280701236,0.338844532069132,0,0.449949858640699,2.96659908770092,0,0.599200221036809,0.384218305321555,0.207379224616955,0.675029691658453,0.420649922702764,0.856952953211411,0.662605622854841,0.489963196859816,1.0543001812006,0,0,0.766124028511126,1.0752457327937,0.527545150920775,0.823388792421687,0.52091337055676,0.837548997004143,0,1.06958773443767,0,0.711858403995515,0.745597783301202,0,0.302286240427142,15.9425468785923,0,1.3599426674155,0,0,2.24013443548668,0.421333260395256,1.02258193546835,1.29893002301434,0,0.422530259330042,0,0,0,0,0.760079596425296,1.01104889002957,0.5709193985953,2.84831672011889,1.63286352971307,1.04091196059682,1.52232739156071,0.922461989024234,1.20578112442098,0.23517741427141,0.628332956648377,0.247194967734374,1.3013942122792,0,0.485300549842228,1.98757366614354,0.969750506270444,0,1.17112318804619,1.8850203613211,0.510914110417183,2.51611761462433,2.99951365496704,1.01656181658452,0.898743836428936,0.457500602818626,0,0.869121600961382,1.02286182932132,1.0389402227978,0.811206315338788,0.305518091550949,0.995255764880744,1.51633655060205,1.05220927943237,0.910843100738926,0.919608417733892,0.720248519221397,0.30140963567143,0.816437989815934,0.640568601424249,0.562210347358373,0.776110112217047,2.58681591519411,1.70195472151037,1.23165786914764,0.219195732427575,0.834141747676794,1.74126083261083,1.85203922767149,0.796137067273973,1.40442637462647,3.60287069960601,1.13665399758237,0.828503090142008,0.234526059981096,0.900310307305074,0.473489471170421,0.393528463494808,0.154267112887378,0.697601834251224,0.268273401399619,0.817357396570186,0.658239399653922,0.492502392237286,0.56748166682099,0.730999937126662,1.75640092232841,0.402619256281115,0.420579897128254,0.308713837137853,0,0.264450566663544,1.2797295032114,1.39342003116263,0.38660238396628,0.201683524623343,1.11189021922435,0.760902504450237,0,0.164698954724011,0.251335208800269,0,0.58489226135736,0,0.216138049874694,0.597423819763102,0.189667900953082,1.82797620175566,0,1.4255592949172,1.35766741017338,0.631222379012867,0.632365371242573,0.295220295959204,0.941992367048249,1.35736880313981,0.296452627087149,0.500535317148282,0.196558995113203,0.224862112384854,0.608580364165509,0.72353147925725,0,0.863088412352432,0.324270453550071,1.09824565275233,4.31304619582064,1.11642284300551,2.49630138491648,1.26289438973556,0.717589654087649,1.4473305640901,0.739012760666419,0.757965647081939,0.325929952884052,0.339490171550376,0.704070744865506,1.67506257441816,2.38043640886014,1.36593553500459,1.7339865851681,0.8858587585951,0.478364305972461,1.47476983244164,0.863424909329478,1.01254341007058,3.01582567878545,3.80733978673097,0,1.10374698521893,0.642202359951168,0.820481806145422,0.163934945376675,0.252470927204373,1.26203287766503,0.780877488593277,1.07711698866399,0.716906393857656,1.55959071857676,1.13230612315533,1.21443210502468,0.584511715822624,1.97643888973262,0.963963949265421,1.84522110770749,0.890328018336276,0.162886959353576,0.494910368917606,1.32745138339963,0.728341908464944,0.604647113929502,0.377210159511796,0.885905678642318,0.922305443831782,0.516856586336442,0,0,2.21225730555071,0,0,2.04263763452273,1.44048875225048,2.19909762430683,1.71469628025274,2.12808280370728,1.78368817602071,1.64549020602121,1.8267896946876,0.469343416127421,0,0.882113592219848,3.2977250588296,0.968786560175433,1.56813604813205,1.19372344003136,2.1338316966858,0.874442509889552,1.29797711407357,0.512612642393558,0.412773735926445,1.29636169158798,0.941842285023455,0.546776910884101,0.457556346413045,1.5298058699447,1.39951452323658,2.3493995546752,0,0.316335993581135,0.203319467126849,0.756037385752609,1.25452977608681,1.31017538247707,1.07891477107857,0.330613822901344,0.785267825952089,0.518459893167171,3.10669656543463,0.56369293868419,0.448549638131936,0.165458490457098,0.583353565032143,0.774958940866387,0.506868376472335,0.704143431874524,1.0416350787516,0.734015410979976,0.483168241652012,0.576060012515731,1.89606672376907,1.82452693761148,1.02710957164827,0.909445760844565,2.8644271306797,3.17890167650024,0.841368146639782,2.0676533804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| ||
|short_description=p@chr5:134789543..134789566,+ | |||
}} | }} |
Latest revision as of 09:38, 6 August 2015
Short description: | p@chr5:134789543..134789566, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:134789543..134789566, + |
Coexpression cluster: | MCL_coexpression_mm9:231 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 7.56e-09 | 9 |
alpha-beta T cell | 7.56e-09 | 9 |
immature T cell | 7.56e-09 | 9 |
mature T cell | 7.56e-09 | 9 |
immature alpha-beta T cell | 7.56e-09 | 9 |
CD4-positive, alpha-beta T cell | 5.77e-08 | 8 |
T cell | 1.82e-07 | 11 |
pro-T cell | 1.82e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
endocrine gland | 4.75e-08 | 60 |
gland of gut | 6.54e-08 | 24 |
gland | 1.03e-07 | 65 |
gut epithelium | 1.06e-07 | 55 |
thymus | 2.83e-07 | 23 |
neck | 2.83e-07 | 23 |
respiratory system epithelium | 2.83e-07 | 23 |
hemolymphoid system gland | 2.83e-07 | 23 |
pharyngeal epithelium | 2.83e-07 | 23 |
thymic region | 2.83e-07 | 23 |
pharyngeal gland | 2.83e-07 | 23 |
entire pharyngeal arch endoderm | 2.83e-07 | 23 |
thymus primordium | 2.83e-07 | 23 |
early pharyngeal endoderm | 2.83e-07 | 23 |
endo-epithelium | 5.47e-07 | 69 |