FFCP PHASE1:Mm9::chr5:53225284..53225351,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr5:53225284..53225351,+ to FFCP PHASE1:Mm9::chr5:53225284..53225351,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=52206 | |EntrezGene=52206 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=321 | |||
|TSSclassifier=NA | |||
|UniProt=D6RDT6 | |UniProt=D6RDT6 | ||
|association_with_transcript=-13bp_to_ENSMUST00000144574_5end | |||
|cluster_id=chr5:53225284..53225351,+ | |||
|description=CAGE_peak_2_at_Anapc4_5end | |||
|id=chr5:53225284..53225351,+ | |||
|ontology_enrichment_celltype=CL:0000393!6.93e-16!39;CL:0000211!6.93e-16!39;CL:0000540!9.46e-14!33;CL:0000047!9.46e-14!33;CL:0000031!9.46e-14!33;CL:0000404!9.46e-14!33;CL:0000055!3.69e-09!50;CL:0000221!4.27e-08!44;CL:0000133!4.27e-08!44;CL:0000117!4.68e-08!23;CL:0000337!4.68e-08!23;CL:0002319!4.83e-08!43;CL:0000107!6.70e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,6.93e-16,39;CL:0000211,6.93e-16,39;CL:0000540,9.46e-14,33;CL:0000047,9.46e-14,33;CL:0000031,9.46e-14,33;CL:0000404,9.46e-14,33;CL:0000221,4.27e-08,44;CL:0000133,4.27e-08,44;CL:0000117,4.68e-08,23;CL:0000337,4.68e-08,23;CL:0002319,4.83e-08,43;CL:0000107,6.70e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!9.91e-16!75;UBERON:0001016!9.91e-16!75;UBERON:0001017!5.81e-15!73;UBERON:0005743!5.81e-15!73;UBERON:0002346!3.03e-14!71;UBERON:0003075!3.03e-14!71;UBERON:0007284!3.03e-14!71;UBERON:0004121!3.14e-14!102;UBERON:0000924!3.14e-14!102;UBERON:0006601!3.14e-14!102;UBERON:0000033!4.05e-11!63;UBERON:0001049!6.38e-11!52;UBERON:0005068!6.38e-11!52;UBERON:0006241!6.38e-11!52;UBERON:0007135!6.38e-11!52;UBERON:0003056!7.10e-11!49;UBERON:0000955!6.71e-10!50;UBERON:0006238!6.71e-10!50;UBERON:0002616!8.45e-10!49;UBERON:0003080!4.89e-09!40;UBERON:0002780!1.27e-08!39;UBERON:0001890!1.27e-08!39;UBERON:0006240!1.27e-08!39;UBERON:0002020!3.38e-08!34;UBERON:0000153!6.38e-08!94;UBERON:0000010!1.68e-07!11;UBERON:0002410!6.70e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.91e-16,75;UBERON:0001017,5.81e-15,73;UBERON:0002346,1.79e-14,64;UBERON:0003075,1.79e-14,64;UBERON:0007284,1.79e-14,64;UBERON:0010314,3.14e-14,92;UBERON:0004121,4.06e-14,95;UBERON:0000924,4.06e-14,95;UBERON:0006601,4.06e-14,95;UBERON:0010371,3.51e-12,73;UBERON:0000073,9.69e-12,54;UBERON:0001049,6.38e-11,52;UBERON:0005068,6.38e-11,52;UBERON:0006241,6.38e-11,52;UBERON:0007135,6.38e-11,52;UBERON:0003056,7.10e-11,49;UBERON:0003080,4.89e-09,40;UBERON:0000955,1.04e-08,47;UBERON:0006238,1.04e-08,47;UBERON:0002780,1.27e-08,39;UBERON:0001890,1.27e-08,39;UBERON:0006240,1.27e-08,39;UBERON:0002616,1.31e-08,46;UBERON:0002020,3.38e-08,34;UBERON:0000922,1.19e-07,320;UBERON:0000010,1.68e-07,11;UBERON:0002410,6.70e-07,9 | |||
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| ||
|short_description=p2@Anapc4 | |||
}} | }} |
Latest revision as of 02:01, 26 September 2015
Short description: | p2@Anapc4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Anapc4_5end |
Coexpression cluster: | MCL_coexpression_mm9:321 |
Association with transcript: | -13bp_to_ENSMUST00000144574_5end |
EntrezGene: | Anapc4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 6.93e-16 | 39 |
electrically active cell | 6.93e-16 | 39 |
neuron | 9.46e-14 | 33 |
neuronal stem cell | 9.46e-14 | 33 |
neuroblast | 9.46e-14 | 33 |
electrically signaling cell | 9.46e-14 | 33 |
ectodermal cell | 4.27e-08 | 44 |
neurectodermal cell | 4.27e-08 | 44 |
CNS neuron (sensu Vertebrata) | 4.68e-08 | 23 |
neuroblast (sensu Vertebrata) | 4.68e-08 | 23 |
neural cell | 4.83e-08 | 43 |
autonomic neuron | 6.70e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
nervous system | 9.91e-16 | 75 |
central nervous system | 5.81e-15 | 73 |
neurectoderm | 1.79e-14 | 64 |
neural plate | 1.79e-14 | 64 |
presumptive neural plate | 1.79e-14 | 64 |
structure with developmental contribution from neural crest | 3.14e-14 | 92 |
ectoderm-derived structure | 4.06e-14 | 95 |
ectoderm | 4.06e-14 | 95 |
presumptive ectoderm | 4.06e-14 | 95 |
ecto-epithelium | 3.51e-12 | 73 |
regional part of nervous system | 9.69e-12 | 54 |
neural tube | 6.38e-11 | 52 |
neural rod | 6.38e-11 | 52 |
future spinal cord | 6.38e-11 | 52 |
neural keel | 6.38e-11 | 52 |
pre-chordal neural plate | 7.10e-11 | 49 |
anterior neural tube | 4.89e-09 | 40 |
brain | 1.04e-08 | 47 |
future brain | 1.04e-08 | 47 |
regional part of forebrain | 1.27e-08 | 39 |
forebrain | 1.27e-08 | 39 |
future forebrain | 1.27e-08 | 39 |
regional part of brain | 1.31e-08 | 46 |
gray matter | 3.38e-08 | 34 |
embryo | 1.19e-07 | 320 |
peripheral nervous system | 1.68e-07 | 11 |
autonomic nervous system | 6.70e-07 | 9 |