FFCP PHASE1:Mm9::chr6:35202670..35202681,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr6:35202670..35202681,+ to FFCP PHASE1:Mm9::chr6:35202670..35202681,+: NSchange) |
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(6 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1947 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=16bp_to_ENSMUST00000152147_5end | |||
|cluster_id=chr6:35202670..35202681,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000152147_5end | |||
|id=chr6:35202670..35202681,+ | |||
|ontology_enrichment_celltype=CL:0000221!2.06e-20!44;CL:0000133!2.06e-20!44;CL:0002319!7.49e-20!43;CL:0000055!2.29e-17!50;CL:0000540!9.34e-14!33;CL:0000047!9.34e-14!33;CL:0000031!9.34e-14!33;CL:0000404!9.34e-14!33;CL:0000393!4.74e-12!39;CL:0000211!4.74e-12!39;CL:0000117!2.05e-11!23;CL:0000337!2.05e-11!23;CL:0002321!4.50e-08!70;CL:0000220!4.50e-08!70;CL:0000333!3.44e-07!10;CL:0000095!3.44e-07!10;CL:0000243!3.44e-07!10;CL:0000123!3.44e-07!10;CL:0000125!3.44e-07!10;CL:0000030!3.44e-07!10;CL:0000339!3.44e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.05e-20,44;CL:0000133,2.05e-20,44;CL:0002319,7.49e-20,43;CL:0000540,9.34e-14,33;CL:0000047,9.34e-14,33;CL:0000031,9.34e-14,33;CL:0000404,9.34e-14,33;CL:0000393,4.74e-12,39;CL:0000211,4.74e-12,39;CL:0000117,2.05e-11,23;CL:0000337,2.05e-11,23;CL:0002321,4.49e-08,70;CL:0000333,3.44e-07,10;CL:0000095,3.44e-07,10;CL:0000243,3.44e-07,10;CL:0000123,3.44e-07,10;CL:0000125,3.44e-07,10;CL:0000030,3.44e-07,10;CL:0000339,3.44e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!9.32e-17!75;UBERON:0001016!9.32e-17!75;UBERON:0001017!7.32e-16!73;UBERON:0005743!7.32e-16!73;UBERON:0004121!2.52e-13!102;UBERON:0000924!2.52e-13!102;UBERON:0006601!2.52e-13!102;UBERON:0002346!1.32e-10!71;UBERON:0003075!1.32e-10!71;UBERON:0007284!1.32e-10!71;UBERON:0001049!2.08e-09!52;UBERON:0005068!2.08e-09!52;UBERON:0006241!2.08e-09!52;UBERON:0007135!2.08e-09!52;UBERON:0002020!8.20e-08!34;UBERON:0002780!4.41e-07!39;UBERON:0001890!4.41e-07!39;UBERON:0006240!4.41e-07!39;UBERON:0000955!6.31e-07!50;UBERON:0006238!6.31e-07!50;UBERON:0000033!6.69e-07!63;UBERON:0003056!9.43e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.32e-17,75;UBERON:0001017,7.32e-16,73;UBERON:0010314,1.46e-14,92;UBERON:0004121,1.18e-12,95;UBERON:0000924,1.18e-12,95;UBERON:0006601,1.18e-12,95;UBERON:0002346,4.21e-10,64;UBERON:0003075,4.21e-10,64;UBERON:0007284,4.21e-10,64;UBERON:0001049,2.08e-09,52;UBERON:0005068,2.08e-09,52;UBERON:0006241,2.08e-09,52;UBERON:0007135,2.08e-09,52;UBERON:0000073,5.72e-09,54;UBERON:0002020,8.20e-08,34;UBERON:0010371,9.66e-08,73;UBERON:0000955,3.77e-07,47;UBERON:0006238,3.77e-07,47;UBERON:0002780,4.41e-07,39;UBERON:0001890,4.41e-07,39;UBERON:0006240,4.41e-07,39;UBERON:0002616,6.33e-07,46;UBERON:0003056,9.43e-07,49 | |||
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| ||
|short_description=p1@ENSMUST00000152147 | |||
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Latest revision as of 15:06, 5 August 2015
Short description: | p1@ENSMUST00000152147 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000152147_5end |
Coexpression cluster: | MCL_coexpression_mm9:1947 |
Association with transcript: | 16bp_to_ENSMUST00000152147_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.05e-20 | 44 |
neurectodermal cell | 2.05e-20 | 44 |
neural cell | 7.49e-20 | 43 |
neuron | 9.34e-14 | 33 |
neuronal stem cell | 9.34e-14 | 33 |
neuroblast | 9.34e-14 | 33 |
electrically signaling cell | 9.34e-14 | 33 |
electrically responsive cell | 4.74e-12 | 39 |
electrically active cell | 4.74e-12 | 39 |
CNS neuron (sensu Vertebrata) | 2.05e-11 | 23 |
neuroblast (sensu Vertebrata) | 2.05e-11 | 23 |
embryonic cell | 4.49e-08 | 70 |
migratory neural crest cell | 3.44e-07 | 10 |
neuron associated cell | 3.44e-07 | 10 |
glial cell (sensu Vertebrata) | 3.44e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 3.44e-07 | 10 |
glial cell | 3.44e-07 | 10 |
glioblast | 3.44e-07 | 10 |
glioblast (sensu Vertebrata) | 3.44e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
nervous system | 9.32e-17 | 75 |
central nervous system | 7.32e-16 | 73 |
structure with developmental contribution from neural crest | 1.46e-14 | 92 |
ectoderm-derived structure | 1.18e-12 | 95 |
ectoderm | 1.18e-12 | 95 |
presumptive ectoderm | 1.18e-12 | 95 |
neurectoderm | 4.21e-10 | 64 |
neural plate | 4.21e-10 | 64 |
presumptive neural plate | 4.21e-10 | 64 |
neural tube | 2.08e-09 | 52 |
neural rod | 2.08e-09 | 52 |
future spinal cord | 2.08e-09 | 52 |
neural keel | 2.08e-09 | 52 |
regional part of nervous system | 5.72e-09 | 54 |
gray matter | 8.20e-08 | 34 |
ecto-epithelium | 9.66e-08 | 73 |
brain | 3.77e-07 | 47 |
future brain | 3.77e-07 | 47 |
regional part of forebrain | 4.41e-07 | 39 |
forebrain | 4.41e-07 | 39 |
future forebrain | 4.41e-07 | 39 |
regional part of brain | 6.33e-07 | 46 |
pre-chordal neural plate | 9.43e-07 | 49 |