FFCP PHASE1:Mm9::chr9:107775114..107775142,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr9:107775114..107775142,- to FFCP PHASE1:Mm9::chr9:107775114..107775142,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=19654 | |EntrezGene=19654 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1396 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc009rnf.1_5end | |||
|cluster_id=chr9:107775114..107775142,- | |||
|description=CAGE_peak_3_at_Rbm6_5end | |||
|id=chr9:107775114..107775142,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.70e-08!29;UBERON:0002370!7.39e-07!23;UBERON:0000974!7.39e-07!23;UBERON:0004807!7.39e-07!23;UBERON:0005058!7.39e-07!23;UBERON:0003351!7.39e-07!23;UBERON:0009113!7.39e-07!23;UBERON:0003295!7.39e-07!23;UBERON:0009722!7.39e-07!23;UBERON:0005562!7.39e-07!23;UBERON:0007690!7.39e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.42e-08,29;UBERON:0005057,1.42e-08,29;UBERON:0000153,2.85e-07,43;UBERON:0000077,3.61e-07,35;UBERON:0002370,6.22e-07,23;UBERON:0000974,6.22e-07,23;UBERON:0004807,6.22e-07,23;UBERON:0005058,6.22e-07,23;UBERON:0003351,6.22e-07,23;UBERON:0009113,6.22e-07,23;UBERON:0003295,6.22e-07,23;UBERON:0009722,6.22e-07,23;UBERON:0005562,6.22e-07,23;UBERON:0007690,6.22e-07,23 | |||
|phase1_expression=2.24208385946712,7.32848356042658,4.54999239389536,9.37639055051173,8.01433167914156,2.68606835059024,2.10251376535973,7.618276083053,6.19470377467334,5.14941957908386,6.50628279256919,3.58974715479014,5.9920255475922,6.38168937658681,4.66353666541928,5.06188168474565,3.49780939064073,3.78554598429885,4.79900517620086,6.36584477697045,5.52781385981954,2.58156473122302,2.08959831311148,3.03985603307473,2.2940928106717,3.44539178469012,1.7230479846363,3.23206849028834,1.52018735565099,2.77233142735924,1.99557459589774,2.54012269383853,1.84519436275371,0,0.288851619751275,1.32987716286794,1.42918549383658,3.34825304589526,0.7813353445238,4.18818995179039,5.29408339227913,3.41522742479223,3.39857247121808,1.25896817975577,0.811015449756117,2.0190142737785,1.56478268869608,0.436050312760893,0,0.388859798148567,0.699932108126813,0,6.54352163625172,10.8804321301702,5.37750078627942,2.82985379639542,3.72493471920384,2.57836046138721,4.65327859977075,3.70293685490423,5.70448263155561,0.338844532069132,0,0.449949858640699,0,0,0.299600110518405,0,2.17748185847803,1.75507719831198,3.57552434297349,1.99955689082663,2.87129103237098,3.67472397644862,3.45043695665651,0.919218786610021,1.10115880999389,3.44755812830007,3.5329502648936,3.16527090552465,3.11057988248193,3.12548022334056,2.23346399201105,1.12552522006336,3.66715794664344,5.89257170947335,5.69486723196412,3.72798891650601,1.81742863999642,1.058001841495,3.18850937571846,0.860423876981386,0.679971333707751,2.15881276655127,1.94932925234301,0.896053774194671,1.26399978118577,0.852151612890289,1.03914401841148,0.35333957451034,1.97180787687353,7.69958864485907,2.54805239706646,0,1.73192832808971,3.04031838570118,1.51657333504435,2.51204535381932,5.95557132388495,2.07818994690755,1.56136794089522,3.65358573974569,2.53677046981664,1.65794904607885,2.82212897125692,1.25666591329675,2.96633961281249,2.31358971071859,7.96149496754887,2.42650274921114,4.19598885074748,4.363877278217,3.72783522436244,3.51336956413857,2.93225389538837,1.02182822083437,3.71426885968353,4.79922184794726,2.54140454146129,4.19413790333504,0.915001205637253,3.64397621127307,2.78118912307642,2.30143911597297,2.28566849015516,2.59586020908412,2.03678727700633,2.61254638281195,1.76905930903572,2.52530227063769,3.3831315170303,2.5289231487682,3.24111833649629,4.21973489940002,4.76255494059295,3.45907044769094,3.18585863503078,5.43277078551933,4.74249584452253,3.21480336285293,3.87092473160687,4.3839146485515,3.61461423993277,5.2237824978325,2.46938563689532,2.7864797354589,2.80885274925294,2.57347907114715,1.98914449576915,1.03562886267751,1.87620847984877,2.16074473753218,2.13070262026689,0.983821158737019,2.00547246753592,1.62773761325285,0.804820204198858,1.05088808130453,1.81015834904829,2.46251196118643,1.13496333364198,2.04679982395465,1.3173006917463,1.47627060636409,3.15434922846191,3.70456604565424,6.27795687669216,5.55346189993443,4.47905326123991,6.27039014023184,2.57734922644187,3.63030344322017,3.11329261382818,1.71203063501303,0.474529061544512,1.64698954724011,1.50801125280162,1.79060824837036,2.72949721966768,1.79763881730844,2.37751854862164,3.78368419183298,1.70701110857774,2.28497025219458,5.63538678365402,3.05476991767971,2.32742984601151,2.73529697572242,1.64414996523069,1.18088118383682,1.8839847340965,0.987177311374404,0.592905254174298,6.00642380577939,4.71741588271687,4.27238013531222,6.08580364165509,3.61765739628625,3.56476192493988,4.89083433666378,1.45921704097532,2.19649130550465,1.43768206527355,1.48856379067401,1.87222603868736,1.26289438973556,2.69096120282868,0.482443521363367,1.84753190166605,2.65287976478679,2.77040459951444,3.56464680127895,3.98973422090454,2.68010011906905,1.90434912708811,1.75620283072019,1.89162172927429,1.99318220683897,2.07291199254733,1.80249646187312,2.59027472798843,1.01254341007058,1.50791283939272,3.26343410291226,0.491764273019036,0.551873492609465,3.85321415970701,4.57125577709592,1.14754461763673,0.757412781613119,1.89304931649754,1.56175497718655,1.93881057959519,2.38968797952552,1.55959071857676,2.54768877709949,2.02405350837447,3.50707029493574,2.76701444562566,1.60660658210904,3.26462195979018,1.6025904330053,5.04949573996086,2.8044920905331,1.32745138339963,2.42780636154981,1.81394134178851,1.88605079755898,1.47650946440386,2.15204603560749,1.80899805217755,0.727067458955011,0.712994756769443,0.632073515871632,1.05418608574999,1.03135543248187,1.70219802876894,2.34079422240703,0.776152102696527,1.50035924522115,2.48276327099183,3.0322698992352,3.29098041204242,0.608929898229199,2.58138878870081,3.81297727554876,1.54369878638473,4.122156323537,2.74489525383039,3.31721087104857,2.14870219205646,3.28281799490123,2.04036585640896,3.70850604021019,4.95525554313773,1.44470807574256,5.18544676635193,5.83942216714542,6.01454601972511,7.0921233694022,2.54967644990783,2.6590775941495,4.56059913554598,0.954670618015114,3.00519193902079,4.26970880966382,3.13215488383224,2.71814784818809,2.18362563746178,2.4275582349267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| |phase1_expression=2.24208385946712,7.32848356042658,4.54999239389536,9.37639055051173,8.01433167914156,2.68606835059024,2.10251376535973,7.618276083053,6.19470377467334,5.14941957908386,6.50628279256919,3.58974715479014,5.9920255475922,6.38168937658681,4.66353666541928,5.06188168474565,3.49780939064073,3.78554598429885,4.79900517620086,6.36584477697045,5.52781385981954,2.58156473122302,2.08959831311148,3.03985603307473,2.2940928106717,3.44539178469012,1.7230479846363,3.23206849028834,1.52018735565099,2.77233142735924,1.99557459589774,2.54012269383853,1.84519436275371,0,0.288851619751275,1.32987716286794,1.42918549383658,3.34825304589526,0.7813353445238,4.18818995179039,5.29408339227913,3.41522742479223,3.39857247121808,1.25896817975577,0.811015449756117,2.0190142737785,1.56478268869608,0.436050312760893,0,0.388859798148567,0.699932108126813,0,6.54352163625172,10.8804321301702,5.37750078627942,2.82985379639542,3.72493471920384,2.57836046138721,4.65327859977075,3.70293685490423,5.70448263155561,0.338844532069132,0,0.449949858640699,0,0,0.299600110518405,0,2.17748185847803,1.75507719831198,3.57552434297349,1.99955689082663,2.87129103237098,3.67472397644862,3.45043695665651,0.919218786610021,1.10115880999389,3.44755812830007,3.5329502648936,3.16527090552465,3.11057988248193,3.12548022334056,2.23346399201105,1.12552522006336,3.66715794664344,5.89257170947335,5.69486723196412,3.72798891650601,1.81742863999642,1.058001841495,3.18850937571846,0.860423876981386,0.679971333707751,2.15881276655127,1.94932925234301,0.896053774194671,1.26399978118577,0.852151612890289,1.03914401841148,0.35333957451034,1.97180787687353,7.69958864485907,2.54805239706646,0,1.73192832808971,3.04031838570118,1.51657333504435,2.51204535381932,5.95557132388495,2.07818994690755,1.56136794089522,3.65358573974569,2.53677046981664,1.65794904607885,2.82212897125692,1.25666591329675,2.96633961281249,2.31358971071859,7.96149496754887,2.42650274921114,4.19598885074748,4.363877278217,3.72783522436244,3.51336956413857,2.93225389538837,1.02182822083437,3.71426885968353,4.79922184794726,2.54140454146129,4.19413790333504,0.915001205637253,3.64397621127307,2.78118912307642,2.30143911597297,2.28566849015516,2.59586020908412,2.03678727700633,2.61254638281195,1.76905930903572,2.52530227063769,3.3831315170303,2.5289231487682,3.24111833649629,4.21973489940002,4.76255494059295,3.45907044769094,3.18585863503078,5.43277078551933,4.74249584452253,3.21480336285293,3.87092473160687,4.3839146485515,3.61461423993277,5.2237824978325,2.46938563689532,2.7864797354589,2.80885274925294,2.57347907114715,1.98914449576915,1.03562886267751,1.87620847984877,2.16074473753218,2.13070262026689,0.983821158737019,2.00547246753592,1.62773761325285,0.804820204198858,1.05088808130453,1.81015834904829,2.46251196118643,1.13496333364198,2.04679982395465,1.3173006917463,1.47627060636409,3.15434922846191,3.70456604565424,6.27795687669216,5.55346189993443,4.47905326123991,6.27039014023184,2.57734922644187,3.63030344322017,3.11329261382818,1.71203063501303,0.474529061544512,1.64698954724011,1.50801125280162,1.79060824837036,2.72949721966768,1.79763881730844,2.37751854862164,3.78368419183298,1.70701110857774,2.28497025219458,5.63538678365402,3.05476991767971,2.32742984601151,2.73529697572242,1.64414996523069,1.18088118383682,1.8839847340965,0.987177311374404,0.592905254174298,6.00642380577939,4.71741588271687,4.27238013531222,6.08580364165509,3.61765739628625,3.56476192493988,4.89083433666378,1.45921704097532,2.19649130550465,1.43768206527355,1.48856379067401,1.87222603868736,1.26289438973556,2.69096120282868,0.482443521363367,1.84753190166605,2.65287976478679,2.77040459951444,3.56464680127895,3.98973422090454,2.68010011906905,1.90434912708811,1.75620283072019,1.89162172927429,1.99318220683897,2.07291199254733,1.80249646187312,2.59027472798843,1.01254341007058,1.50791283939272,3.26343410291226,0.491764273019036,0.551873492609465,3.85321415970701,4.57125577709592,1.14754461763673,0.757412781613119,1.89304931649754,1.56175497718655,1.93881057959519,2.38968797952552,1.55959071857676,2.54768877709949,2.02405350837447,3.50707029493574,2.76701444562566,1.60660658210904,3.26462195979018,1.6025904330053,5.04949573996086,2.8044920905331,1.32745138339963,2.42780636154981,1.81394134178851,1.88605079755898,1.47650946440386,2.15204603560749,1.80899805217755,0.727067458955011,0.712994756769443,0.632073515871632,1.05418608574999,1.03135543248187,1.70219802876894,2.34079422240703,0.776152102696527,1.50035924522115,2.48276327099183,3.0322698992352,3.29098041204242,0.608929898229199,2.58138878870081,3.81297727554876,1.54369878638473,4.122156323537,2.74489525383039,3.31721087104857,2.14870219205646,3.28281799490123,2.04036585640896,3.70850604021019,4.95525554313773,1.44470807574256,5.18544676635193,5.83942216714542,6.01454601972511,7.0921233694022,2.54967644990783,2.6590775941495,4.56059913554598,0.954670618015114,3.00519193902079,4.26970880966382,3.13215488383224,2.71814784818809,2.18362563746178,2.4275582349267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| ||
|short_description=p3@Rbm6 | |||
}} | }} |
Latest revision as of 03:48, 26 September 2015
Short description: | p3@Rbm6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Rbm6_5end |
Coexpression cluster: | MCL_coexpression_mm9:1396 |
Association with transcript: | 0bp_to_uc009rnf.1_5end |
EntrezGene: | Rbm6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 1.42e-08 | 29 |
immune organ | 1.42e-08 | 29 |
anterior region of body | 2.85e-07 | 43 |
mixed endoderm/mesoderm-derived structure | 3.61e-07 | 35 |
thymus | 6.22e-07 | 23 |
neck | 6.22e-07 | 23 |
respiratory system epithelium | 6.22e-07 | 23 |
hemolymphoid system gland | 6.22e-07 | 23 |
pharyngeal epithelium | 6.22e-07 | 23 |
thymic region | 6.22e-07 | 23 |
pharyngeal gland | 6.22e-07 | 23 |
entire pharyngeal arch endoderm | 6.22e-07 | 23 |
thymus primordium | 6.22e-07 | 23 |
early pharyngeal endoderm | 6.22e-07 | 23 |