FFCP PHASE1:Mm9::chr9:45660823..45660839,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=23821 | |EntrezGene=23821 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=50 | |||
|TSSclassifier=NA | |||
|UniProt=Q69ZQ6 | |UniProt=Q69ZQ6 | ||
|association_with_transcript=17bp_to_ENSMUST00000159970,uc009pgi.2_5end | |||
|cluster_id=chr9:45660823..45660839,+ | |||
|description=CAGE_peak_4_at_Bace1_5end | |||
|id=chr9:45660823..45660839,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,7.11e-12,1;CL:0000084,1.04e-09,11;CL:0000827,1.04e-09,11;CL:0000838,5.92e-09,12;CL:0000542,2.59e-08,13;CL:0000051,2.59e-08,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003408!5.07e-17!24;UBERON:0004177!1.44e-15!29;UBERON:0002370!3.72e-15!23;UBERON:0000974!3.72e-15!23;UBERON:0004807!3.72e-15!23;UBERON:0005058!3.72e-15!23;UBERON:0003351!3.72e-15!23;UBERON:0009113!3.72e-15!23;UBERON:0003295!3.72e-15!23;UBERON:0009722!3.72e-15!23;UBERON:0005562!3.72e-15!23;UBERON:0007690!3.72e-15!23;UBERON:0006562!2.06e-14!24;UBERON:0001557!2.06e-14!24;UBERON:0001042!2.06e-14!24;UBERON:0008814!2.06e-14!24;UBERON:0009145!2.06e-14!24;UBERON:0000072!1.62e-12!27;UBERON:0001004!2.08e-11!42;UBERON:0002193!4.70e-11!48;UBERON:0002390!2.24e-10!45;UBERON:0003061!2.24e-10!45;UBERON:0000065!4.23e-10!41;UBERON:0000063!4.64e-09!35;UBERON:0005057!1.04e-08!51;UBERON:0002405!1.98e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.42e-12,23;UBERON:0000974,4.42e-12,23;UBERON:0004807,4.42e-12,23;UBERON:0005058,4.42e-12,23;UBERON:0003351,4.42e-12,23;UBERON:0009113,4.42e-12,23;UBERON:0003295,4.42e-12,23;UBERON:0009722,4.42e-12,23;UBERON:0005562,4.42e-12,23;UBERON:0007690,4.42e-12,23;UBERON:0006562,1.38e-11,24;UBERON:0003408,1.38e-11,24;UBERON:0001557,1.38e-11,24;UBERON:0001042,1.38e-11,24;UBERON:0008814,1.38e-11,24;UBERON:0009145,1.38e-11,24;UBERON:0000072,2.52e-10,27;UBERON:0004177,1.26e-09,29;UBERON:0005057,1.26e-09,29;UBERON:0000077,5.27e-08,35;UBERON:0007811,8.71e-08,36;UBERON:0000065,7.49e-07,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0.34968160967599,0,0,0,0,0,0,0,7.14894848646374,10.1867917764185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0.136694227721025,0,0.169978429993855,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1298205288131,1.42912905275575,0.358053391334963,0,0.721172697119813,0.738447635872886,0.706765149637033,1.143102099825,0.302478555410522,0.779663045918019,1.15454209968395,1.98690733708667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0.34968160967599,0,0,0,0,0,0,0,7.14894848646374,10.1867917764185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0.136694227721025,0,0.169978429993855,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1298205288131,1.42912905275575,0.358053391334963,0,0.721172697119813,0.738447635872886,0.706765149637033,1.143102099825,0.302478555410522,0.779663045918019,1.15454209968395,1.98690733708667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0.231867835620421 | ||
|short_description=p4@Bace1 | |||
}} | }} |
Latest revision as of 17:51, 26 September 2015
Short description: | p4@Bace1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Bace1_5end |
Coexpression cluster: | MCL_coexpression_mm9:50 |
Association with transcript: | 17bp_to_ENSMUST00000159970, uc009pgi.2_5end |
EntrezGene: | Bace1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 7.11e-12 | 1 |
T cell | 1.04e-09 | 11 |
pro-T cell | 1.04e-09 | 11 |
lymphoid lineage restricted progenitor cell | 5.92e-09 | 12 |
lymphocyte | 2.59e-08 | 13 |
common lymphoid progenitor | 2.59e-08 | 13 |
Ontology term | p-value | n |
---|---|---|
thymus | 4.42e-12 | 23 |
neck | 4.42e-12 | 23 |
respiratory system epithelium | 4.42e-12 | 23 |
hemolymphoid system gland | 4.42e-12 | 23 |
pharyngeal epithelium | 4.42e-12 | 23 |
thymic region | 4.42e-12 | 23 |
pharyngeal gland | 4.42e-12 | 23 |
entire pharyngeal arch endoderm | 4.42e-12 | 23 |
thymus primordium | 4.42e-12 | 23 |
early pharyngeal endoderm | 4.42e-12 | 23 |
pharynx | 1.38e-11 | 24 |
gland of gut | 1.38e-11 | 24 |
upper respiratory tract | 1.38e-11 | 24 |
chordate pharynx | 1.38e-11 | 24 |
pharyngeal arch system | 1.38e-11 | 24 |
pharyngeal region of foregut | 1.38e-11 | 24 |
segment of respiratory tract | 2.52e-10 | 27 |
hemopoietic organ | 1.26e-09 | 29 |
immune organ | 1.26e-09 | 29 |
mixed endoderm/mesoderm-derived structure | 5.27e-08 | 35 |
craniocervical region | 8.71e-08 | 36 |
respiratory tract | 7.49e-07 | 41 |