FFCP PHASE1:Mm9::chr9:48793572..48793583,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr9:48793572..48793583,+ to FFCP PHASE1:Mm9::chr9:48793572..48793583,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=235323 | |EntrezGene=235323 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q5I043 | |UniProt=Q5I043 | ||
|association_with_transcript=82bp_to_ENSMUST00000047349,NM_175482,uc009pir.1,uc009pis.1_5end | |||
|cluster_id=chr9:48793572..48793583,+ | |||
|description=CAGE_peak_2_at_Usp28_5end | |||
|id=chr9:48793572..48793583,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!3.59e-09!18;UBERON:0000948!3.59e-09!18;UBERON:0005498!3.59e-09!18;UBERON:0004140!3.59e-09!18;UBERON:0009881!3.59e-09!18;UBERON:0004141!3.59e-09!18;UBERON:0003084!3.59e-09!18;UBERON:0007005!3.59e-09!18;UBERON:0004139!3.59e-09!18;UBERON:0004291!3.59e-09!18;UBERON:0004535!1.61e-07!23;UBERON:0001009!1.61e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,5.08e-36,18;UBERON:0000948,5.08e-36,18;UBERON:0005498,5.08e-36,18;UBERON:0004140,5.08e-36,18;UBERON:0009881,5.08e-36,18;UBERON:0004141,5.08e-36,18;UBERON:0003084,5.08e-36,18;UBERON:0007005,5.08e-36,18;UBERON:0004139,5.08e-36,18;UBERON:0004291,5.08e-36,18;UBERON:0004535,1.69e-27,23;UBERON:0001009,1.69e-27,23;UBERON:0004872,3.39e-18,33;UBERON:0003103,3.18e-13,43;UBERON:0003914,7.91e-12,47;UBERON:0010314,3.95e-09,92;UBERON:0003081,5.72e-08,87;UBERON:0002021,6.35e-07,10;UBERON:0000411,6.35e-07,10;UBERON:0001950,6.35e-07,10 | |||
|phase1_expression=0.320297694209588,0,0,0.30246421130683,0,0,0,0.258246646883153,4.36445038670167,6.55380673701582,0.34243593645101,0.0797721589953364,0.342401459862411,0.174840804837995,0,0,0,0,0.137114433605739,0.42438965179803,0.0850432901510698,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0.523523743973798,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0,0,0.279972843250725,0,0.167782606057736,2.17608642603403,2.01656279485478,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0,0.287536413054709,0,0,0,0.153606533256243,0,0.0914876436024097,0,0,0,0,0,0.284743361598206,0.186399445825301,0,0,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0.517875767294343,0,0,0.304465478312141,0,0.301445281105245,0.117588707135705,0,0.247194967734374,0.144599356919912,0,0.647067399789637,0.662524555381181,0.969750506270444,0,0.878342391034642,0.83778682725382,0,0,0,0,0.299581278809645,0.457500602818626,0.251308704225729,0.521472960576829,1.02286182932132,0.20778804455956,0.324482526135515,0.101839363850316,0,0,0,0.520481771850815,0,0,0.30140963567143,0.0680364991513279,0.2562274405697,0.187403449119458,0.776110112217047,0.215567992932842,0.189106080167819,0.351902248327898,0.43839146485515,0,0,0,0,0,0,0,2.07125772535502,2.34526059981096,1.80062061461015,1.65721314909647,1.57411385397923,1.07986979021165,2.32533944750408,1.87791380979733,2.33530684734339,1.97471819896177,1.97000956894914,2.59420190546738,3.36259971078264,2.85415149878366,3.89198614405078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0.358794827043824,0,0.184753190166605,0,0.325929952884052,0.169745085775188,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0.117211686592203,0,2.01976741763498,0.315508219416257,0.390438744296638,0.430846795465598,0.238968797952552,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,0,0,0,0.302323556964751,0,0,0,0,0.363533729477506,0.356497378384721,0,0,0,0,0.36012218806262,0.129358683782755,0.214337035031592,0,0.178368817602071,0.164549020602121,0,0,0,0,0.16488625294148,0.645857706783622,0.180938774784468,0,0.164140899745061,0,0,0,0,0.185194527369712,0.188368457004691,0,0,0.169978429993855,0.279902904647316,0.276399947608848,0,0.158167996790568,0,0.216010681643603,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.448549638131936,0.165458490457098,0.388902376688095,0.129159823477731,0.675824501963113,0.469428954583016,0,0.734015410979976,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0.201932899896295,0,0,0,0,0,0.906921534460845,0,0,0,0,0,0.36630324853453,0.214368379079066,0,1.12950368523413,0,1.14579102687879,0.515559547031063,2.05524755931193,0,0.675022500231806,0,1.35942722695261,1.03552062350364,0.103787347584177,0.399024873401031,0,0,0.209613162627982,0,0.222246727801615,0.824140228955577,0.64183841918363,0.758091635291392,0.25347929989024,0.943131706930381,0.842773567228942,0.512201219238954,0.574354689556133,0.476293691283074,0.347652977834566,0.38581844092741,0.412085900803307,0.735994600671987,1.02860775715625,0.354951612318675,0.476872379894642,0.581385666529314,0.846984423737976,0.25384382367503,0.73171189149109,1.05227884575137,0.543216455383447,2.24456908663095,0.593175090620871,0.886540341380071,0.409231043169689,0.309873682371932,0.771626443924566,0.249810577937946,0.467863216890817,0.859484216193193,1.53030665655075,0.661774257358546,0.695603506861264 | |phase1_expression=0.320297694209588,0,0,0.30246421130683,0,0,0,0.258246646883153,4.36445038670167,6.55380673701582,0.34243593645101,0.0797721589953364,0.342401459862411,0.174840804837995,0,0,0,0,0.137114433605739,0.42438965179803,0.0850432901510698,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0.523523743973798,0,0,0,0.125896817975577,0,0,0,0.218025156380447,0,0,0.279972843250725,0,0.167782606057736,2.17608642603403,2.01656279485478,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0,0.287536413054709,0,0,0,0.153606533256243,0,0.0914876436024097,0,0,0,0,0,0.284743361598206,0.186399445825301,0,0,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0.517875767294343,0,0,0.304465478312141,0,0.301445281105245,0.117588707135705,0,0.247194967734374,0.144599356919912,0,0.647067399789637,0.662524555381181,0.969750506270444,0,0.878342391034642,0.83778682725382,0,0,0,0,0.299581278809645,0.457500602818626,0.251308704225729,0.521472960576829,1.02286182932132,0.20778804455956,0.324482526135515,0.101839363850316,0,0,0,0.520481771850815,0,0,0.30140963567143,0.0680364991513279,0.2562274405697,0.187403449119458,0.776110112217047,0.215567992932842,0.189106080167819,0.351902248327898,0.43839146485515,0,0,0,0,0,0,0,2.07125772535502,2.34526059981096,1.80062061461015,1.65721314909647,1.57411385397923,1.07986979021165,2.32533944750408,1.87791380979733,2.33530684734339,1.97471819896177,1.97000956894914,2.59420190546738,3.36259971078264,2.85415149878366,3.89198614405078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0,0.166845105716094,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0.358794827043824,0,0.184753190166605,0,0.325929952884052,0.169745085775188,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0.117211686592203,0,2.01976741763498,0.315508219416257,0.390438744296638,0.430846795465598,0.238968797952552,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,0,0,0,0.302323556964751,0,0,0,0,0.363533729477506,0.356497378384721,0,0,0,0,0.36012218806262,0.129358683782755,0.214337035031592,0,0.178368817602071,0.164549020602121,0,0,0,0,0.16488625294148,0.645857706783622,0.180938774784468,0,0.164140899745061,0,0,0,0,0.185194527369712,0.188368457004691,0,0,0.169978429993855,0.279902904647316,0.276399947608848,0,0.158167996790568,0,0.216010681643603,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0.448549638131936,0.165458490457098,0.388902376688095,0.129159823477731,0.675824501963113,0.469428954583016,0,0.734015410979976,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0.201932899896295,0,0,0,0,0,0.906921534460845,0,0,0,0,0,0.36630324853453,0.214368379079066,0,1.12950368523413,0,1.14579102687879,0.515559547031063,2.05524755931193,0,0.675022500231806,0,1.35942722695261,1.03552062350364,0.103787347584177,0.399024873401031,0,0,0.209613162627982,0,0.222246727801615,0.824140228955577,0.64183841918363,0.758091635291392,0.25347929989024,0.943131706930381,0.842773567228942,0.512201219238954,0.574354689556133,0.476293691283074,0.347652977834566,0.38581844092741,0.412085900803307,0.735994600671987,1.02860775715625,0.354951612318675,0.476872379894642,0.581385666529314,0.846984423737976,0.25384382367503,0.73171189149109,1.05227884575137,0.543216455383447,2.24456908663095,0.593175090620871,0.886540341380071,0.409231043169689,0.309873682371932,0.771626443924566,0.249810577937946,0.467863216890817,0.859484216193193,1.53030665655075,0.661774257358546,0.695603506861264 | ||
|short_description=p2@Usp28 | |||
}} | }} |
Latest revision as of 19:02, 26 September 2015
Short description: | p2@Usp28 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Usp28_5end |
Coexpression cluster: | NA |
Association with transcript: | 82bp_to_ENSMUST00000047349, NM_175482, uc009pir.1, uc009pis.1_5end |
EntrezGene: | Usp28 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 5.08e-36 | 18 |
heart | 5.08e-36 | 18 |
primitive heart tube | 5.08e-36 | 18 |
primary heart field | 5.08e-36 | 18 |
anterior lateral plate mesoderm | 5.08e-36 | 18 |
heart tube | 5.08e-36 | 18 |
heart primordium | 5.08e-36 | 18 |
cardiac mesoderm | 5.08e-36 | 18 |
cardiogenic plate | 5.08e-36 | 18 |
heart rudiment | 5.08e-36 | 18 |
cardiovascular system | 1.69e-27 | 23 |
circulatory system | 1.69e-27 | 23 |
splanchnic layer of lateral plate mesoderm | 3.39e-18 | 33 |
compound organ | 3.18e-13 | 43 |
epithelial tube | 7.91e-12 | 47 |
structure with developmental contribution from neural crest | 3.95e-09 | 92 |
lateral plate mesoderm | 5.72e-08 | 87 |
occipital lobe | 6.35e-07 | 10 |
visual cortex | 6.35e-07 | 10 |
neocortex | 6.35e-07 | 10 |