FF:10154-103A1: Difference between revisions

Latest revision as of 12:22, 3 June 2020

Name:	thalamus, adult, donor10252
Species:	Human (Homo sapiens)
Library ID:	CNhs12314
Sample type:	tissues
Genomic View:	UCSC
RefEX:	Specific genes
FANTOM CAT:	1, 2, 3, 4, 5
CAGEd-oPOSSUM:	link
ZENBU report :	link

Additional information

Sample information

strain	NA
tissue	thalamus
dev stage	NA
sex	female
age	76
cell type	CELL MIXTURE - tissue sample
cell line	NA
company	NA
collaboration	Peter Heutink
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00005223

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs12314		CAGE		DRX008742		DRR009614

Accession ID Hg19

Library id		BAM		CTSS
CNhs12314		DRZ001039		DRZ002424

Accession ID Hg38

Library id		BAM		CTSS
CNhs12314		DRZ012389		DRZ013774

Download raw sequence, BAM & CTSS

Hg19

Fasta	BAM	CTSS
download	download	donwload

Hg38

BAM	CTSS
download	donwload

HumanCAGEScan Download raw sequence, BAM & CTSS

Library id		3prime-FASTQ		5prime-FASTQ		BAM		CTSS
NCig10026		download		download		download		download

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0.181
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.957
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.306
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0.0427
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0.286
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0.21
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0.0817
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0.0427
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0.175
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0.0427
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0.0817
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0.0427
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0.117
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0.389
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.0289
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.266
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.789
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.15
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0.0817
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.0678
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0.0427
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.0217
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0.0427
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.86
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0.0427
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.229
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0.117
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.0427
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.0817
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0.0427
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0.237
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0.0427
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0.15
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.0526
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	-0.0404
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0.487
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0.107
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0.0427
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0.262
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.526
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.383
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	1.1
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.0817
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0.181
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0.35
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0.0817
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0.33
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0.237
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0.286
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0.752
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.117
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0.424
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0.0817
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12314

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.0437
MA0003.1	MA0003.1	0.192
MA0004.1	MA0004.1	0.323
MA0006.1	MA0006.1	0.306
MA0007.1	MA0007.1	0.518
MA0009.1	MA0009.1	0.115
MA0014.1	MA0014.1	0.704
MA0017.1	MA0017.1	0.00114
MA0018.2	MA0018.2	0.58
MA0019.1	MA0019.1	0.921
MA0024.1	MA0024.1	0.611
MA0025.1	MA0025.1	0.962
MA0027.1	MA0027.1	0.533
MA0028.1	MA0028.1	0.0587
MA0029.1	MA0029.1	0.0297
MA0030.1	MA0030.1	0.108
MA0031.1	MA0031.1	0.147
MA0035.2	MA0035.2	0.00781
MA0038.1	MA0038.1	0.272
MA0039.2	MA0039.2	0.166
MA0040.1	MA0040.1	0.844
MA0041.1	MA0041.1	0.431
MA0042.1	MA0042.1	0.923
MA0043.1	MA0043.1	0.856
MA0046.1	MA0046.1	0.00141
MA0047.2	MA0047.2	0.468
MA0048.1	MA0048.1	0.134
MA0050.1	MA0050.1	0.145
MA0051.1	MA0051.1	0.232
MA0052.1	MA0052.1	0.542
MA0055.1	MA0055.1	6.49112e-4
MA0057.1	MA0057.1	0.804
MA0058.1	MA0058.1	0.387
MA0059.1	MA0059.1	0.0704
MA0060.1	MA0060.1	0.356
MA0061.1	MA0061.1	0.00352
MA0062.2	MA0062.2	0.0029
MA0065.2	MA0065.2	6.72148e-4
MA0066.1	MA0066.1	0.00677
MA0067.1	MA0067.1	0.886
MA0068.1	MA0068.1	0.748
MA0069.1	MA0069.1	0.77
MA0070.1	MA0070.1	0.593
MA0071.1	MA0071.1	0.0136
MA0072.1	MA0072.1	0.349
MA0073.1	MA0073.1	0.522
MA0074.1	MA0074.1	0.243
MA0076.1	MA0076.1	0.116
MA0077.1	MA0077.1	0.00762
MA0078.1	MA0078.1	0.805
MA0079.2	MA0079.2	0.894
MA0080.2	MA0080.2	1.05347e-6
MA0081.1	MA0081.1	0.0249
MA0083.1	MA0083.1	0.00698
MA0084.1	MA0084.1	0.176
MA0087.1	MA0087.1	0.287
MA0088.1	MA0088.1	0.355
MA0090.1	MA0090.1	0.193
MA0091.1	MA0091.1	0.548
MA0092.1	MA0092.1	0.214
MA0093.1	MA0093.1	0.375
MA0099.2	MA0099.2	1.36423e-24
MA0100.1	MA0100.1	0.528
MA0101.1	MA0101.1	0.00229
MA0102.2	MA0102.2	0.103
MA0103.1	MA0103.1	0.052
MA0104.2	MA0104.2	0.406
MA0105.1	MA0105.1	3.1952e-4
MA0106.1	MA0106.1	0.0216
MA0107.1	MA0107.1	0.00169
MA0108.2	MA0108.2	0.0579
MA0111.1	MA0111.1	0.782
MA0112.2	MA0112.2	0.00106
MA0113.1	MA0113.1	0.964
MA0114.1	MA0114.1	0.00278
MA0115.1	MA0115.1	0.746
MA0116.1	MA0116.1	0.00375
MA0117.1	MA0117.1	0.761
MA0119.1	MA0119.1	0.254
MA0122.1	MA0122.1	0.78
MA0124.1	MA0124.1	0.93
MA0125.1	MA0125.1	0.444
MA0131.1	MA0131.1	0.937
MA0135.1	MA0135.1	0.325
MA0136.1	MA0136.1	1.48527e-10
MA0137.2	MA0137.2	0.246
MA0138.2	MA0138.2	0.549
MA0139.1	MA0139.1	0.494
MA0140.1	MA0140.1	0.00787
MA0141.1	MA0141.1	0.0019
MA0142.1	MA0142.1	0.429
MA0143.1	MA0143.1	0.0387
MA0144.1	MA0144.1	0.692
MA0145.1	MA0145.1	0.276
MA0146.1	MA0146.1	0.0319
MA0147.1	MA0147.1	0.225
MA0148.1	MA0148.1	0.422
MA0149.1	MA0149.1	0.0137
MA0150.1	MA0150.1	4.35556e-5
MA0152.1	MA0152.1	0.571
MA0153.1	MA0153.1	0.236
MA0154.1	MA0154.1	0.0495
MA0155.1	MA0155.1	0.57
MA0156.1	MA0156.1	3.82932e-7
MA0157.1	MA0157.1	0.68
MA0159.1	MA0159.1	0.0115
MA0160.1	MA0160.1	0.012
MA0162.1	MA0162.1	0.131
MA0163.1	MA0163.1	9.4947e-7
MA0164.1	MA0164.1	0.679
MA0258.1	MA0258.1	0.018
MA0259.1	MA0259.1	0.724

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12314

Novel motif	Logo	P-value
1	1	0.074
10	10	0.0567
100	100	0.371
101	101	0.401
102	102	0.925
103	103	0.0505
104	104	0.104
105	105	0.158
106	106	0.0249
107	107	0.129
108	108	0.918
109	109	9.81437e-4
11	11	0.00877
110	110	0.0519
111	111	0.219
112	112	0.332
113	113	0.332
114	114	0.191
115	115	0.823
116	116	0.144
117	117	0.0157
118	118	0.27
119	119	0.297
12	12	0.49
120	120	0.206
121	121	0.392
122	122	0.828
123	123	0.274
124	124	0.266
125	125	0.542
126	126	0.046
127	127	0.4
128	128	0.169
129	129	0.51
13	13	0.00362
130	130	0.34
131	131	0.0417
132	132	0.425
133	133	0.115
134	134	0.472
135	135	0.184
136	136	8.82695e-4
137	137	0.887
138	138	0.915
139	139	0.281
14	14	0.923
140	140	0.982
141	141	0.415
142	142	0.353
143	143	0.0409
144	144	0.697
145	145	0.29
146	146	0.624
147	147	0.804
148	148	0.475
149	149	0.28
15	15	0.0687
150	150	0.108
151	151	0.822
152	152	0.0656
153	153	0.89
154	154	0.278
155	155	0.958
156	156	0.412
157	157	0.409
158	158	0.0857
159	159	0.00477
16	16	0.0268
160	160	0.237
161	161	0.364
162	162	0.654
163	163	0.916
164	164	0.0136
165	165	0.168
166	166	0.812
167	167	0.903
168	168	0.741
169	169	0.0227
17	17	0.0905
18	18	0.0546
19	19	0.264
2	2	0.903
20	20	0.144
21	21	0.0383
22	22	0.227
23	23	0.389
24	24	0.0453
25	25	0.544
26	26	0.00313
27	27	0.517
28	28	0.855
29	29	0.00332
3	3	0.0684
30	30	0.925
31	31	0.91
32	32	0.00961
33	33	0.0461
34	34	0.675
35	35	0.614
36	36	0.241
37	37	0.0312
38	38	0.441
39	39	0.3
4	4	0.793
40	40	0.0541
41	41	0.312
42	42	0.265
43	43	0.141
44	44	0.123
45	45	0.68
46	46	0.0513
47	47	0.0791
48	48	0.063
49	49	0.384
5	5	0.928
50	50	0.481
51	51	0.387
52	52	0.592
53	53	0.474
54	54	0.536
55	55	0.727
56	56	0.596
57	57	0.405
58	58	0.362
59	59	0.0554
6	6	0.797
60	60	0.0864
61	61	0.137
62	62	0.207
63	63	0.338
64	64	0.138
65	65	0.266
66	66	0.112
67	67	0.329
68	68	0.446
69	69	0.262
7	7	0.121
70	70	0.0628
71	71	0.00918
72	72	0.272
73	73	0.0249
74	74	0.869
75	75	0.0263
76	76	0.332
77	77	0.118
78	78	0.00189
79	79	0.361
8	8	0.0604
80	80	0.437
81	81	0.509
82	82	0.636
83	83	0.0468
84	84	0.572
85	85	0.366
86	86	0.211
87	87	1.07957e-4
88	88	0.628
89	89	0.165
9	9	0.366
90	90	0.0702
91	91	0.737
92	92	0.448
93	93	0.904
94	94	0.209
95	95	0.0116
96	96	0.774
97	97	0.744
98	98	0.222
99	99	0.588

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs12314

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000002 in vivo cell sample
FF:0010154 human thalamus - adult donor sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000955 (brain)
0001897 (dorsal plus ventral thalamus)
0001894 (diencephalon)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0000073 (regional part of nervous system)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002616 (regional part of brain)
0002780 (regional part of forebrain)
0002784 (regional part of diencephalon)
0010317 (germ layer / neural crest derived structure)
0001017 (central nervous system)
0001016 (nervous system)
0001890 (forebrain)
0010225 (thalamic complex)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010154 (human thalamus - adult donor sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0010316 (germ layer / neural crest)

@@ Line 1: / Line 1: @@
 {{f5samples
-|id=FF:10154-103A1
+|DRA_sample_Accession=CAGE@SAMD00005223
-|name=thalamus, adult, donor10252
+|HumanCAGEScanFiles=NCig10026;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/thalamus%252c%2520adult%252c%2520donor10252.NCig10026.10154-103A1.hg19.GCTATA.3prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/thalamus%252c%2520adult%252c%2520donor10252.NCig10026.10154-103A1.hg19.GCTATA.5prime.fq.gz;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/thalamus%252c%2520adult%252c%2520donor10252.NCig10026.10154-103A1.hg19.GCTATA.bam;http://fantom.gsc.riken.jp/5/datafiles/phase2.3/basic/human.tissue.CAGEScan/thalamus%252c%2520adult%252c%2520donor10252.NCig10026.10154-103A1.hg19.GCTATA.pairs.bed.gz
-|sample_id=10154
+|accession_numbers=CAGE;DRX008742;DRR009614;DRZ001039;DRZ002424;DRZ012389;DRZ013774
-|rna_tube_id=103A1
+|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000955,UBERON:0001897,UBERON:0001894,UBERON:0000479,UBERON:0004121,UBERON:0010314,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0000073,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0002616,UBERON:0002780,UBERON:0002784,UBERON:0010317,UBERON:0001017,UBERON:0001016,UBERON:0001890,UBERON:0010225
-|rna_box=103
+|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003
-|rna_position=A1
-|sample_cell_lot=NA
-|sample_cell_catalog=NA
-|sample_company=
-|rna_lot_number=
-|rna_catalog_number=
-|sample_species=Human (Homo sapiens)
-|sample_strain=
-|sample_dev_stage=
-|sample_tissue=thalamus
-|sample_donor(cell lot)=donor: 10252
-|sample_sex=female
-|sample_age=76
-|sample_ethnicity=
-|rna_rin=
-|rna_od260/230=2.26
-|rna_od260/280=2.06
-|sample_cell_type=CELL MIXTURE - tissue sample
-|sample_cell_line=
-|sample_collaboration=Peter Heutink
-|sample_experimental_condition=
-|sample_disease=
-|rna_sample_type=total RNA
-|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
-|rna_weight_ug=52.54575
-|rna_concentration=0.70061
-|sample_note=
-|profile_hcage=CNhs12314,LSID913,release011,COMPLETED
-|profile_cagescan=NCig10026,,,
-|profile_srnaseq=,,,
-|profile_rnaseq=,,,
-|ancestors_in_cell_lineage_facet=
-|ancestors_in_anatomy_facet=UBERON:0000025,UBERON:0000033,UBERON:0000061,UBERON:0000073,UBERON:0000153,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000922,UBERON:0000923,UBERON:0000924,UBERON:0000955,UBERON:0001016,UBERON:0001017,UBERON:0001049,UBERON:0001062,UBERON:0001890,UBERON:0001894,UBERON:0001897,UBERON:0002050,UBERON:0002346,UBERON:0002532,UBERON:0002616,UBERON:0002780,UBERON:0003056,UBERON:0003075,UBERON:0003080,UBERON:0004121,UBERON:0005068,UBERON:0005291,UBERON:0005423,UBERON:0005743,UBERON:0006598,UBERON:0007023,UBERON:0007135,UBERON:0007284
 |ancestors_in_disease_facet=
-|sample_description=
+|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010154
+|comment=
+|created_by=
+|creation_date=
+|data_phase=2
+|datafreeze_phase=2
+|def=
+|expression_enrichment_score=chr7:100065686..100065701,-!p2@TSC22D4!2.75!556.68!TSC22D4;;chr22:38380543..38380569,-!p1@SOX10!2.55!355.81!SOX10;;chr21:34442439..34442455,+!p1@OLIG1!2.53!339.26!OLIG1;;chr11:61520075..61520136,+!p1@C11orf9!2.32!420.46!C11orf9;;chr8:53322304..53322340,-!p1@ST18!2.19!154.84!ST18;;chr2:145277882..145277967,-!p3@ZEB2!1.99!161.56!ZEB2;;chr3:181429704..181429722,+!p1@SOX2!1.99!97.64!SOX2;;chr10:134599649..134599653,-!p1@NKX6-2!1.97!93.19!NKX6-2;;chr16:1031762..1031781,+!p1@SOX8!1.96!90.30!SOX8;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.96!89.37!PEG3;;chr21:34398234..34398250,+!p1@OLIG2!1.93!83.99!OLIG2;;chr8:53322347..53322378,-!p2@ST18!1.90!77.78!ST18;;chr12:26277817..26277863,-!p2@BHLHE41!1.89!101.47!BHLHE41;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!1.82!65.47!POU3F3;;chr12:26277956..26277980,-!p1@BHLHE41!1.79!210.38!BHLHE41;;chr21:34442540..34442560,+!p2@OLIG1!1.74!53.37!OLIG1;;chr10:48355030..48355090,+!p1@ZNF488!1.68!59.99!ZNF488;;chr12:106976678..106976708,+!p2@RFX4!1.64!42.92!RFX4;;chr19:46801639..46801699,+!p1@HIF3A!1.63!41.79!HIF3A;;chr11:113930425..113930471,+!p1@ZBTB16!1.61!56.78!ZBTB16;;chr9:114287433..114287513,+!p1@ZNF483!1.58!92.99!ZNF483;;chr3:126076242..126076257,-!p1@KLF15!1.58!45.92!KLF15;;chr16:85932760..85932775,+!p1@IRF8!1.54!34.03!IRF8;;chr1:214161272..214161322,+!p1@PROX1!1.53!46.13!PROX1;;chr12:54779511..54779577,-!p5@ZNF385A!1.53!33.10!ZNF385A;;chr11:47400078..47400106,-!p1@SPI1!1.51!31.34!SPI1;;chr2:95963052..95963106,+!p1@KCNIP3!1.47!28.34!KCNIP3;;chr15:80696703..80696754,+!p1@ARNT2!1.46!36.72!ARNT2;;chr4:81118647..81118666,+!p1@PRDM8!1.45!35.79!PRDM8;;chr19:13135386..13135435,+!p4@NFIX!1.45!27.10!NFIX;;chr9:77112244..77112262,+!p1@RORB!1.44!29.37!RORB;;chr3:181429741..181429767,+!p2@SOX2!1.42!25.13!SOX2;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!1.40!24.00!POU3F3;;chr15:80735246..80735321,+!p3@ARNT2!1.39!23.58!ARNT2;;chr11:31832862..31832884,-!p2@PAX6!1.38!23.17!PAX6;;chr19:30863271..30863338,+!p1@ZNF536!1.38!22.86!ZNF536;;chr17:53342311..53342400,+!p1@HLF!1.36!25.34!HLF;;chr7:63505799..63505904,+!p1@ZNF727!1.35!21.31!ZNF727;;chr12:106976774..106976788,+!p1@RFX4!1.33!20.48!RFX4;;chr6:19837592..19837621,+!p1@ID4!1.32!119.78!ID4;;chr1:61548069..61548102,+!p3@NFIA!1.32!47.58!NFIA;;chr10:64134120..64134183,+!p1@ZNF365!1.32!24.10!ZNF365;;chr14:33408072..33408114,+!p2@NPAS3!1.31!22.76!NPAS3;;chr19:46800289..46800327,+!p2@HIF3A!1.31!19.34!HIF3A;;chr14:29235961..29236008,+!p1@FOXG1!1.30!19.03!FOXG1;;chr14:33403881..33403924,+!p1@NPAS3!1.30!18.93!NPAS3;;chr14:29234581..29234601,+!p2@FOXG1!1.30!18.82!FOXG1;;chr22:41763452..41763466,+!p2@TEF!1.29!18.31!TEF;;chr2:214016314..214016343,-!p2@IKZF2!1.26!28.96!IKZF2;;chr12:26277929..26277955,-!p3@BHLHE41!1.26!24.41!BHLHE41;;chr16:51185172..51185197,-!p1@SALL1!1.26!17.07!SALL1;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.25!16.96!ZBED1;;chr2:95963120..95963136,+!p2@KCNIP3!1.25!16.76!KCNIP3;;chr17:38219209..38219230,+!p1@THRA!1.24!209.14!THRA;;chr2:166326200..166326216,+!p1@CSRNP3!1.24!23.89!CSRNP3;;chr3:114819124..114819200,-!p3@ZBTB20!1.23!36.51!ZBTB20;;chr16:51185318..51185348,-!p2@SALL1!1.21!15.20!SALL1;;chr2:178128250..178128293,-!p6@NFE2L2!1.20!37.24!NFE2L2;;chr3:126076264..126076305,-!p2@KLF15!1.20!20.58!KLF15;;chr10:119302232..119302265,+!p1@EMX2!1.20!14.79!EMX2;;chr7:115670804..115670825,-!p1@TFEC!1.20!14.79!TFEC;;chr17:7492684..7492778,-!p2@SOX15!1.19!30.51!SOX15;;chr4:26344778..26344807,+!p8@RBPJ!1.19!14.58!RBPJ;;chr19:21512115..21512135,-!p3@ZNF708!1.18!28.75!ZNF708;;chr13:72441315..72441454,-!p1@DACH1!1.18!28.44!DACH1;;chr8:40755333..40755352,-!p1@ZMAT4!1.18!14.17!ZMAT4;;chr12:103351444..103351461,+!p1@ASCL1!1.18!14.07!ASCL1;;chr19:21512144..21512191,-!p2@ZNF708!1.16!62.58!ZNF708;;chr16:79634624..79634642,-!p1@MAF!1.16!53.06!MAF;;chr14:73360799..73360817,-!p1@DPF3!1.16!46.13!DPF3;;chr11:113930401..113930422,+!p3@ZBTB16!1.16!13.34!ZBTB16;;chrX:82763292..82763317,+!p1@POU3F4!1.16!13.34!POU3F4;;chr17:70117153..70117174,+!p1@SOX9!1.15!135.19!SOX9;;chr7:28725740..28725778,+!p1@CREB5!1.15!115.95!CREB5;;chr11:113930291..113930339,+!p2@ZBTB16!1.15!21.41!ZBTB16;;chr14:33403648..33403710,+!p3@NPAS3!1.15!13.24!NPAS3;;chr8:53322411..53322422,-!p6@ST18!1.14!12.93!ST18;;chr4:26344754..26344772,+!p10@RBPJ!1.14!12.83!RBPJ;;chr1:40105299..40105326,-!p1@HEYL!1.13!12.62!HEYL;;chr2:145275982..145276003,-!p7@ZEB2!1.13!12.52!ZEB2;;chr17:47439437..47439533,-!p1@ZNF652!1.12!98.88!ZNF652;;chr17:38821373..38821440,-!p1@KRT222,p2@SMARCE1!1.12!12.31!SMARCE1;;chr15:57511609..57511651,+!p2@TCF12!1.11!20.07!TCF12;;chr6:126112074..126112144,+!p1@NCOA7!1.09!149.98!NCOA7;;chr19:38085768..38085821,+!p1@ZNF540!1.09!16.96!ZNF540;;chr16:67198633..67198671,+!p1@HSF4!1.09!11.38!HSF4;;chrX:25034067..25034088,-!p1@ARX!1.09!11.38!ARX;;chr20:21494654..21494678,-!p2@NKX2-2!1.09!11.17!NKX2-2;;chr5:71803177..71803255,-!p1@ZNF366!1.08!10.96!ZNF366;;chr6:28321971..28321995,-!p1@ZNF323!1.08!10.96!ZNF323;;chr19:57019215..57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OX1;;chr22:42739533..42739586,-!p2@ENST00000515426!0.66!3.62!TCF20;;chr2:16080659..16080685,+!p1@MYCN!0.66!3.62!MYCN;;chr2:45168875..45168916,+!p1@SIX3!0.66!3.62!SIX3;;chr4:149363637..149363651,-!p4@NR3C2!0.66!3.62!NR3C2;;chr17:38256822..38256851,-!p1@NR1D1!0.65!31.44!NR1D1;;chr3:48282587..48282603,+!p1@ZNF589!0.65!17.79!ZNF589;;chr20:3388579..3388619,-!p3@C20orf194!0.65!9.21!C20orf194;;chr3:114866124..114866149,-!p5@ZBTB20!0.65!6.31!ZBTB20;;chr3:25469724..25469773,+!p1@RARB!0.65!5.28!RARB;;chr2:176033027..176033050,-!p3@ATF2!0.65!5.07!ATF2;;chr19:49139477..49139552,-!p4@DBP!0.65!4.55!DBP;;chr2:45168997..45169020,+!p4@SIX3!0.65!3.52!SIX3;;chr3:147127177..147127194,+!p2@ZIC1!0.65!3.52!ZIC1;;chr5:2751762..2751784,-!p1@IRX2!0.65!3.52!IRX2;;chr10:31610110..31610159,+!p2@ZEB1!0.65!3.52!ZEB1;;chr11:8040739..8040815,+!p4@TUB!0.65!3.52!TUB;;chr13:45010939..45011033,-!p1@TSC22D1!0.64!263.34!TSC22D1;;chr2:48541789..48541874,+!p1@FOXN2!0.64!89.78!FOXN2;;chr10:63809106..63809127,+!p1@ARID5B!0.64!53.89!ARID5B;;chr15:77197655..77197716,-!p1@SCAPER!0.64!35.79!SCAPER;;chr4:140098339..140098392,-!p1@ELF2!0.64!32.58!ELF2;;chr19:21688387..21688432,+!p1@ZNF429!0.64!23.79!ZNF429;;chr19:3359257..3359362,+!p3@NFIC!0.64!11.38!NFIC;;chr8:123793959..123793977,+!p4@ZHX2!0.64!7.14!ZHX2;;chr19:38183208..38183225,-!p1@ZNF781!0.64!4.55!ZNF781;;chr6:99282438..99282457,+!p2@POU3F2!0.64!3.41!POU3F2;;chr16:51185149..51185160,-!p5@SALL1!0.64!3.41!SALL1;;chr3:141150883..141150961,+!p6@ZBTB38!0.64!3.41!ZBTB38;;chr10:119302182..119302196,+!p6@EMX2!0.64!3.41!EMX2;;chr11:85393886..85393913,-!p3@CREBZF!0.64!3.41!CREBZF;;chr9:77112225..77112238,+!p2@RORB!0.64!3.41!RORB;;chrX:107019181..107019193,-!p10@TSC22D3!0.64!3.41!TSC22D3;;chr10:111967345..111967422,+!p1@MXI1!0.63!63.71!MXI1;;chr15:31619326..31619390,+!p2@KLF13!0.63!44.89!KLF13;;chr9:20622478..20622525,-!p1@MLLT3!0.63!30.10!MLLT3;;chr2:145275162..145275202,-!p2@ZEB2!0.63!22.55!ZEB2;;chr2:178128199..178128245,-!p3@NFE2L2!0.63!20.38!NFE2L2;;chr10:38146510..38146576,-!p1@ZNF248!0.63!10.65!ZNF248;;chr1:61548374..61548415,+!p4@NFIA!0.63!6.62!NFIA;;chr7:113726357..113726443,+!p1@FOXP2!0.63!6.21!FOXP2;;chr2:180726254..180726275,-!p4@ZNF385B!0.63!3.31!ZNF385B;;chr2:2328299..2328363,-!p3@MYT1L!0.63!3.31!MYT1L;;chr15:61521495..61521506,-!p5@RORA!0.63!3.31!RORA;;chr15:80696824..80696835,+!p9@ARNT2!0.63!3.31!ARNT2;;chr1:61548225..61548299,+!p1@NFIA!0.62!49.65!NFIA;;chr9:20622444..20622468,-!p2@MLLT3!0.62!11.89!MLLT3;;chr19:42636586..42636607,-!p1@POU2F2!0.62!10.03!POU2F2;;chr1:151043266..151043295,+!p2@GABPB2!0.62!7.65!GABPB2;;chr18:53254566..53254567,-!p8@TCF4!0.62!5.59!TCF4;;chr9:2015275..2015287,+!p8@SMARCA2!0.62!5.48!SMARCA2;;chr15:57211634..57211657,+!p5@TCF12!0.62!5.17!TCF12;;chr18:52989565..52989623,-!p9@TCF4!0.62!4.24!TCF4;;chr7:28725715..28725727,+!p3@CREB5!0.62!3.83!CREB5;;chr6:28321909..28321965,-!p3@ZNF323!0.62!3.21!ZNF323;;chr8:93074803..93074845,-!p1@RUNX1T1!0.62!3.21!RUNX1T1;;chr10:64133862..64133884,+!p4@ZNF365!0.62!3.21!ZNF365;;chr10:64133934..64133954,+!p6@ZNF365!0.62!3.21!ZNF365;;chr9:104161123..104161205,+!p1@ZNF189!0.61!25.96!ZNF189;;chr16:1464688..1464728,-!p1@UNKL!0.61!25.55!UNKL;;chr14:74318611..74318682,+!p1@PTGR2,p2@ZNF410!0.61!25.34!ZNF410;;chrX:101975643..101975683,+!p1@BHLHB9!0.61!7.55!BHLHB9;;chr19:37341160..37341194,-!p2@ZNF790!0.61!7.34!ZNF790;;chr19:52839515..52839572,+!p1@ZNF610!0.61!7.34!ZNF610;;chr19:12405606..12405629,-!p2@ZNF44!0.61!6.62!ZNF44;;chr6:143266185..143266238,-!p2@HIVEP2!0.61!4.55!HIVEP2;;chr12:57914481..57914509,+!p5@MBD6!0.61!3.62!MBD6;;chr4:57522166..57522260,-!p2@HOPX!0.61!3.62!HOPX;;chr14:22005343..22005364,-!p5@SALL2!0.61!3.10!SALL2;;chr15:57210818..57210930,+!p1@TCF12!0.60!65.37!TCF12;;chr2:113033164..113033219,+!p1@ZC3H6!0.60!30.20!ZC3H6;;chr22:41777927..41777971,+!p1@TEF!0.60!30.10!TEF;;chr19:52901094..52901134,+!p1@ZNF528!0.60!23.89!ZNF528;;chr19:20150301..20150321,-!p1@ZNF682!0.60!8.79!ZNF682;;chr3:24536253..24536328,-!p1@THRB!0.60!6.21!THRB;;chr19:44331461..44331482,+!p3@ZNF283!0.60!5.28!ZNF283;;chr19:37464063..37464127,+!p2@ZNF568!0.60!4.14!ZNF568;;chr12:26278008..26278024,-!p4@BHLHE41!0.60!3.72!BHLHE41;;chr5:92919068..92919082,+!p5@NR2F1!0.60!3.72!NR2F1;;chr15:37392534..37392562,-!p10@MEIS2!0.60!3.31!MEIS2;;chr18:45935720..45935772,-!p1@ZBTB7C!0.60!3.00!ZBTB7C;;chr2:214016254..214016282,-!p7@IKZF2!0.60!3.00!IKZF2;;chr2:45168834..45168847,+!p2@SIX3!0.60!3.00!SIX3;;chr19:35759824..35759891,+!p1@USF2!0.59!110.67!USF2;;chr3:40566428..40566480,+!p1@ZNF621!0.59!27.51!ZNF621;;chr19:37407212..37407280,+!p1@ZNF568!0.59!13.86!ZNF568;;chr8:106330656..106330684,+!p1@ZFPM2!0.59!8.79!ZFPM2;;chr6:56954830..56954845,+!p3@ZNF451!0.59!7.03!ZNF451;;chr1:78445148..78445170,-!p6@FUBP1!0.59!3.72!FUBP1;;chr3:169381420..169381535,-!p1@MECOM!0.59!3.52!MECOM;;chr3:147111231..147111281,+!p3@ZIC1!0.59!2.90!ZIC1;;chr3:147111505..147111529,+!p6@ZIC1!0.59!2.90!ZIC1;;chr8:77593448..77593471,+!p2@ZFHX4!0.59!2.90!ZFHX4;;chr17:53344945..53344977,+!p2@HLF!0.59!2.90!HLF;;chr18:530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 |fonse_cell_line=
 |fonse_cell_line_closure=
@@ Line 66: / Line 42: @@
 |fonse_treatment=
 |fonse_treatment_closure=
-|top_motifs=
-|comment=
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-|creation_date=
-|def=
 |has_quality=
-|is_a=EFO:0002091;;FF:0000002;;FF:0000004;;FF:0000210;;FF:0010154
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+|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/thalamus%252c%2520adult%252c%2520donor10252.CNhs12314.10154-103A1.hg19.ctss.bed.gz
+|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/thalamus%252c%2520adult%252c%2520donor10252.CNhs12314.10154-103A1.hg19.nobarcode.rdna.fa.gz
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+|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/thalamus%252c%2520adult%252c%2520donor10252.CNhs12314.10154-103A1.hg38.nobarcode.ctss.bed.gz
+|id=FF:10154-103A1
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+|is_obsolete=
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+|microRNAs=
+|microRNAs_nn=
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+|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10154
+|name=thalamus, adult, donor10252
 |namespace=FANTOM5
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+|rna_concentration=0.70061
+|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
+|rna_lot_number=
+|rna_od260/230=2.26
+|rna_od260/280=2.06
+|rna_position=A1
+|rna_rin=
+|rna_sample_type=total RNA
+|rna_tube_id=103A1
+|rna_weight_ug=52.54575
+|sample_age=76
+|sample_category=tissues
+|sample_cell_catalog=NA
+|sample_cell_line=
+|sample_cell_lot=NA
+|sample_cell_type=CELL MIXTURE - tissue sample
+|sample_collaboration=Peter Heutink
+|sample_company=
+|sample_description=
+|sample_dev_stage=
+|sample_disease=
+|sample_donor(cell lot)=donor: 10252
+|sample_ethnicity=
+|sample_experimental_condition=
+|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;9.96092089881837e-256!GO:0005737;cytoplasm;1.03418537264737e-143!GO:0043226;organelle;2.03790818543754e-116!GO:0043229;intracellular organelle;5.71811723863504e-116!GO:0043227;membrane-bound organelle;1.02821467492708e-110!GO:0043231;intracellular membrane-bound organelle;1.65688763416361e-110!GO:0044444;cytoplasmic part;7.9795284174651e-89!GO:0005515;protein binding;8.97162516379044e-73!GO:0044422;organelle part;1.48120691542839e-66!GO:0044446;intracellular organelle part;1.52196066789198e-65!GO:0032991;macromolecular complex;2.54388248894855e-56!GO:0016043;cellular component organization and biogenesis;3.24961205690368e-43!GO:0003723;RNA binding;2.09724873325443e-41!GO:0030529;ribonucleoprotein complex;1.71246064229307e-40!GO:0005634;nucleus;2.82347864935462e-38!GO:0044238;primary metabolic process;3.30949309485348e-38!GO:0044428;nuclear part;7.29678327203041e-38!GO:0043233;organelle lumen;7.29678327203041e-38!GO:0031974;membrane-enclosed lumen;7.29678327203041e-38!GO:0044237;cellular metabolic process;1.01601538238666e-36!GO:0005739;mitochondrion;8.52850841980588e-36!GO:0033036;macromolecule localization;1.00466959188311e-35!GO:0043170;macromolecule metabolic process;2.66293139705091e-35!GO:0015031;protein transport;1.05438380883005e-34!GO:0031090;organelle membrane;4.55561961300825e-33!GO:0008104;protein localization;3.09918590611834e-32!GO:0045184;establishment of protein localization;1.63220828628111e-31!GO:0043234;protein complex;2.99880299701844e-30!GO:0046907;intracellular transport;1.12777083599024e-29!GO:0016071;mRNA metabolic process;3.66792377614265e-29!GO:0006396;RNA processing;4.37909815070992e-27!GO:0008380;RNA splicing;3.05016861328817e-26!GO:0031975;envelope;7.60513475680261e-26!GO:0044429;mitochondrial part;1.09263307886449e-25!GO:0031967;organelle envelope;1.21983370851753e-25!GO:0019538;protein metabolic process;2.73915494602017e-25!GO:0043283;biopolymer metabolic process;2.14047287843697e-24!GO:0051649;establishment of cellular localization;3.64253481308299e-24!GO:0051641;cellular localization;5.91225874615335e-24!GO:0031981;nuclear lumen;6.26961919410678e-24!GO:0006397;mRNA processing;1.93355553672233e-23!GO:0005829;cytosol;2.93956406877719e-23!GO:0044260;cellular macromolecule metabolic process;2.30916087304391e-22!GO:0044267;cellular protein metabolic process;9.49339181525636e-22!GO:0016192;vesicle-mediated transport;1.10082364970544e-21!GO:0006886;intracellular protein transport;2.07939915687425e-21!GO:0006996;organelle organization and biogenesis;9.45913512333202e-21!GO:0010467;gene expression;1.52703211316429e-20!GO:0005840;ribosome;1.63818959264164e-19!GO:0005740;mitochondrial envelope;1.98475155780561e-18!GO:0005681;spliceosome;5.01586569158639e-18!GO:0031966;mitochondrial membrane;8.47312029064679e-18!GO:0006119;oxidative phosphorylation;1.99442522268571e-17!GO:0006412;translation;2.28782347136272e-17!GO:0000166;nucleotide binding;3.01659854614538e-17!GO:0019866;organelle inner membrane;3.39133053748477e-17!GO:0065003;macromolecular complex assembly;1.78718618264007e-16!GO:0005794;Golgi apparatus;3.09252965678683e-16!GO:0005743;mitochondrial inner membrane;3.88810871550991e-16!GO:0005654;nucleoplasm;1.54849720602491e-15!GO:0009058;biosynthetic process;5.46434404775618e-15!GO:0003735;structural constituent of ribosome;8.02324075272253e-15!GO:0022607;cellular component assembly;2.32377118816402e-14!GO:0006512;ubiquitin cycle;2.44472277587407e-14!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.44472277587407e-14!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.56277282203641e-14!GO:0016817;hydrolase activity, acting on acid anhydrides;3.07622809419531e-14!GO:0016462;pyrophosphatase activity;3.12775165305953e-14!GO:0044451;nucleoplasm part;3.61801291568039e-14!GO:0016874;ligase activity;7.5284896519197e-14!GO:0017111;nucleoside-triphosphatase activity;2.01886773336023e-13!GO:0043412;biopolymer modification;2.22019072048864e-13!GO:0044455;mitochondrial membrane part;2.23866023137053e-13!GO:0009059;macromolecule biosynthetic process;2.807261758141e-13!GO:0033279;ribosomal subunit;7.45033717475636e-13!GO:0031982;vesicle;7.77064581576425e-13!GO:0006464;protein modification process;1.17063851706467e-12!GO:0008134;transcription factor binding;1.23889954493345e-12!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.44873686739648e-12!GO:0012505;endomembrane system;1.5114885534023e-12!GO:0043687;post-translational protein modification;1.57553490614685e-12!GO:0050136;NADH dehydrogenase (quinone) activity;1.84005458934556e-12!GO:0003954;NADH dehydrogenase activity;1.84005458934556e-12!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.84005458934556e-12!GO:0005746;mitochondrial respiratory chain;2.05536001177416e-12!GO:0030695;GTPase regulator activity;2.08092594278085e-12!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.23471958159113e-12!GO:0044249;cellular biosynthetic process;2.68374852661986e-12!GO:0051603;proteolysis involved in cellular protein catabolic process;2.97661882657536e-12!GO:0006511;ubiquitin-dependent protein catabolic process;3.40570479385717e-12!GO:0031410;cytoplasmic vesicle;3.60148863762158e-12!GO:0006457;protein folding;4.37808755220883e-12!GO:0019941;modification-dependent protein catabolic process;4.40080024532253e-12!GO:0043632;modification-dependent macromolecule catabolic process;4.40080024532253e-12!GO:0032553;ribonucleotide binding;5.31692168678018e-12!GO:0032555;purine ribonucleotide binding;5.31692168678018e-12!GO:0044257;cellular protein catabolic process;5.47413909934813e-12!GO:0048770;pigment granule;1.22725345828167e-11!GO:0042470;melanosome;1.22725345828167e-11!GO:0031988;membrane-bound vesicle;1.2274360327945e-11!GO:0017076;purine nucleotide binding;2.04174302209217e-11!GO:0016070;RNA metabolic process;2.13405428938184e-11!GO:0043228;non-membrane-bound organelle;3.16997598381872e-11!GO:0043232;intracellular non-membrane-bound organelle;3.16997598381872e-11!GO:0044265;cellular macromolecule catabolic process;3.47662768560874e-11!GO:0016023;cytoplasmic membrane-bound vesicle;5.46385205782698e-11!GO:0030964;NADH dehydrogenase complex (quinone);9.30220801504855e-11!GO:0045271;respiratory chain complex I;9.30220801504855e-11!GO:0005747;mitochondrial respiratory chain complex I;9.30220801504855e-11!GO:0022618;protein-RNA complex assembly;1.45638911147093e-10!GO:0042775;organelle ATP synthesis coupled electron transport;1.84589697842052e-10!GO:0042773;ATP synthesis coupled electron transport;1.84589697842052e-10!GO:0043285;biopolymer catabolic process;1.96973480877448e-10!GO:0044445;cytosolic part;2.4638027663078e-10!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.57867735239467e-10!GO:0016604;nuclear body;4.11140732636006e-10!GO:0051082;unfolded protein binding;4.11460710282944e-10!GO:0048193;Golgi vesicle transport;4.45312577384272e-10!GO:0006605;protein targeting;4.47789071953364e-10!GO:0005768;endosome;5.25995562632282e-10!GO:0005830;cytosolic ribosome (sensu Eukaryota);5.72087042852638e-10!GO:0007264;small GTPase mediated signal transduction;6.33742747197305e-10!GO:0008092;cytoskeletal protein binding;7.26876214947294e-10!GO:0031980;mitochondrial lumen;9.14651170923316e-10!GO:0005759;mitochondrial matrix;9.14651170923316e-10!GO:0005083;small GTPase regulator activity;1.74028602675541e-09!GO:0030163;protein catabolic process;1.74822904879596e-09!GO:0016607;nuclear speck;1.76451065266861e-09!GO:0005783;endoplasmic reticulum;1.90925071393337e-09!GO:0008135;translation factor activity, nucleic acid binding;3.31100440257619e-09!GO:0006793;phosphorus metabolic process;4.92116079842059e-09!GO:0006796;phosphate metabolic process;4.92116079842059e-09!GO:0000502;proteasome complex (sensu Eukaryota);7.18272652814951e-09!GO:0044248;cellular catabolic process;8.73740884898313e-09!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;9.45388617040534e-09!GO:0016044;membrane organization and biogenesis;1.12907018628469e-08!GO:0048523;negative regulation of cellular process;1.24873364175189e-08!GO:0031252;leading edge;1.41403432081129e-08!GO:0003676;nucleic acid binding;1.41403432081129e-08!GO:0008565;protein transporter activity;1.52478813244468e-08!GO:0007010;cytoskeleton organization and biogenesis;1.70832948109481e-08!GO:0000398;nuclear mRNA splicing, via spliceosome;2.3767437887936e-08!GO:0000375;RNA splicing, via transesterification reactions;2.3767437887936e-08!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.3767437887936e-08!GO:0009057;macromolecule catabolic process;2.60919337352079e-08!GO:0019899;enzyme binding;2.92582865069264e-08!GO:0030036;actin cytoskeleton organization and biogenesis;3.04376553350478e-08!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.13335139050983e-08!GO:0050794;regulation of cellular process;4.13515192297913e-08!GO:0003924;GTPase activity;4.3602949653719e-08!GO:0005730;nucleolus;4.36713966805055e-08!GO:0005635;nuclear envelope;5.14779726146185e-08!GO:0008639;small protein conjugating enzyme activity;6.30195978166678e-08!GO:0015935;small ribosomal subunit;6.7114962114696e-08!GO:0045045;secretory pathway;7.8747421354624e-08!GO:0019787;small conjugating protein ligase activity;8.08902935031498e-08!GO:0004842;ubiquitin-protein ligase activity;8.38327936180329e-08!GO:0019829;cation-transporting ATPase activity;9.37836504941316e-08!GO:0006461;protein complex assembly;9.96328814634578e-08!GO:0006913;nucleocytoplasmic transport;1.07898141823041e-07!GO:0031965;nuclear membrane;1.26935837290484e-07!GO:0050789;regulation of biological process;1.44541674661637e-07!GO:0006446;regulation of translational initiation;1.53443198898337e-07!GO:0005525;GTP binding;1.65597132774209e-07!GO:0051169;nuclear transport;1.78110029849679e-07!GO:0003712;transcription cofactor activity;2.43574095671095e-07!GO:0032559;adenyl ribonucleotide binding;2.52492773159643e-07!GO:0030029;actin filament-based process;3.15696021638244e-07!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;4.56393243818419e-07!GO:0005524;ATP binding;5.59340907470119e-07!GO:0048519;negative regulation of biological process;5.76770987662589e-07!GO:0016881;acid-amino acid ligase activity;6.93035475366826e-07!GO:0016879;ligase activity, forming carbon-nitrogen bonds;7.78003672621956e-07!GO:0003743;translation initiation factor activity;7.81451225186596e-07!GO:0030554;adenyl nucleotide binding;9.09330970409731e-07!GO:0015631;tubulin binding;9.21777786115954e-07!GO:0005096;GTPase activator activity;1.02456273765326e-06!GO:0044431;Golgi apparatus part;1.02456273765326e-06!GO:0016564;transcription repressor activity;1.05097504028048e-06!GO:0016568;chromatin modification;1.53532518971175e-06!GO:0006413;translational initiation;1.53532518971175e-06!GO:0015986;ATP synthesis coupled proton transport;2.19662097603545e-06!GO:0015985;energy coupled proton transport, down electrochemical gradient;2.19662097603545e-06!GO:0032561;guanyl ribonucleotide binding;2.36620881713011e-06!GO:0019001;guanyl nucleotide binding;2.36620881713011e-06!GO:0016310;phosphorylation;2.42073840040966e-06!GO:0008047;enzyme activator activity;2.55530059550766e-06!GO:0015630;microtubule cytoskeleton;3.52871003542252e-06!GO:0044432;endoplasmic reticulum part;3.70942864254426e-06!GO:0005769;early endosome;3.73516128566824e-06!GO:0016887;ATPase activity;3.82607268103216e-06!GO:0012501;programmed cell death;4.28079380077314e-06!GO:0044440;endosomal part;4.28079380077314e-06!GO:0010008;endosome membrane;4.28079380077314e-06!GO:0008287;protein serine/threonine phosphatase complex;4.54472278671327e-06!GO:0006915;apoptosis;4.56682940750608e-06!GO:0006325;establishment and/or maintenance of chromatin architecture;4.98348341763682e-06!GO:0006259;DNA metabolic process;5.18160741880799e-06!GO:0045786;negative regulation of progression through cell cycle;5.4052279768248e-06!GO:0006897;endocytosis;6.54215248091766e-06!GO:0010324;membrane invagination;6.54215248091766e-06!GO:0051186;cofactor metabolic process;6.54215248091766e-06!GO:0008219;cell death;6.86198925957372e-06!GO:0016265;death;6.86198925957372e-06!GO:0015934;large ribosomal subunit;7.49637185493526e-06!GO:0048471;perinuclear region of cytoplasm;7.64347738388567e-06!GO:0051246;regulation of protein metabolic process;7.99170148610275e-06!GO:0005770;late endosome;8.02537838820267e-06!GO:0042623;ATPase activity, coupled;8.5305035170498e-06!GO:0006366;transcription from RNA polymerase II promoter;9.20918940982082e-06!GO:0003779;actin binding;9.64998173608567e-06!GO:0007265;Ras protein signal transduction;1.03664562784658e-05!GO:0007242;intracellular signaling cascade;1.03763745325837e-05!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.17941593293128e-05!GO:0017038;protein import;1.25434819719259e-05!GO:0044453;nuclear membrane part;1.61004518260664e-05!GO:0006323;DNA packaging;1.68237760547003e-05!GO:0009060;aerobic respiration;2.10913680044042e-05!GO:0046034;ATP metabolic process;2.16200060217711e-05!GO:0005761;mitochondrial ribosome;2.27672288021446e-05!GO:0000313;organellar ribosome;2.27672288021446e-05!GO:0016469;proton-transporting two-sector ATPase complex;2.43033229568322e-05!GO:0008017;microtubule binding;2.68312783120058e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;2.74326509657425e-05!GO:0045333;cellular respiration;2.77711285713073e-05!GO:0009150;purine ribonucleotide metabolic process;2.78156101298002e-05!GO:0032940;secretion by cell;2.80584545336976e-05!GO:0006163;purine nucleotide metabolic process;2.97401192107136e-05!GO:0005773;vacuole;2.99936208581872e-05!GO:0030027;lamellipodium;3.009751203693e-05!GO:0006403;RNA localization;3.27941663570714e-05!GO:0050657;nucleic acid transport;3.58623966537082e-05!GO:0051236;establishment of RNA localization;3.58623966537082e-05!GO:0050658;RNA transport;3.58623966537082e-05!GO:0048475;coated membrane;4.06439822909052e-05!GO:0030117;membrane coat;4.06439822909052e-05!GO:0051128;regulation of cellular component organization and biogenesis;4.09391869007382e-05!GO:0005905;coated pit;4.10446072751186e-05!GO:0009152;purine ribonucleotide biosynthetic process;4.11741355737887e-05!GO:0032446;protein modification by small protein conjugation;4.55199167723678e-05!GO:0006164;purine nucleotide biosynthetic process;4.61231283574597e-05!GO:0009056;catabolic process;4.88010445931671e-05!GO:0006754;ATP biosynthetic process;4.90921981638992e-05!GO:0006753;nucleoside phosphate metabolic process;4.90921981638992e-05!GO:0009259;ribonucleotide metabolic process;5.24981246438224e-05!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);5.36441857700575e-05!GO:0003714;transcription corepressor activity;5.74735663872978e-05!GO:0000245;spliceosome assembly;6.25650991089663e-05!GO:0009205;purine ribonucleoside triphosphate metabolic process;6.25650991089663e-05!GO:0009144;purine nucleoside triphosphate metabolic process;6.25650991089663e-05!GO:0000139;Golgi membrane;7.02345663694146e-05!GO:0045259;proton-transporting ATP synthase complex;7.16300353433198e-05!GO:0009199;ribonucleoside triphosphate metabolic process;7.18432965688086e-05!GO:0009055;electron carrier activity;7.22060474962485e-05!GO:0009141;nucleoside triphosphate metabolic process;7.56487155197714e-05!GO:0051056;regulation of small GTPase mediated signal transduction;7.56487155197714e-05!GO:0009966;regulation of signal transduction;7.93189541816375e-05!GO:0005643;nuclear pore;8.31562689801515e-05!GO:0006810;transport;8.67794260694248e-05!GO:0006099;tricarboxylic acid cycle;9.38576785171173e-05!GO:0046356;acetyl-CoA catabolic process;9.38576785171173e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;9.39248238889794e-05!GO:0015078;hydrogen ion transmembrane transporter activity;9.51533677237961e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;9.86418860840694e-05!GO:0005874;microtubule;0.000100163507240308!GO:0016567;protein ubiquitination;0.000101128412333341!GO:0005789;endoplasmic reticulum membrane;0.000120611406696656!GO:0065007;biological regulation;0.000120624282000034!GO:0031072;heat shock protein binding;0.000132640290560041!GO:0009260;ribonucleotide biosynthetic process;0.000162351224280606!GO:0001726;ruffle;0.000163709050564204!GO:0000151;ubiquitin ligase complex;0.000180279541657576!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;0.000183288935648593!GO:0009145;purine nucleoside triphosphate biosynthetic process;0.000183288935648593!GO:0043566;structure-specific DNA binding;0.000194288790776683!GO:0000323;lytic vacuole;0.00019781157975997!GO:0005764;lysosome;0.00019781157975997!GO:0000159;protein phosphatase type 2A complex;0.000210642806803183!GO:0009142;nucleoside triphosphate biosynthetic process;0.000210807700062195!GO:0009201;ribonucleoside triphosphate biosynthetic process;0.000210807700062195!GO:0030135;coated vesicle;0.000211586409981825!GO:0005085;guanyl-nucleotide exchange factor activity;0.000215059724630798!GO:0009892;negative regulation of metabolic process;0.000223036597854091!GO:0009109;coenzyme catabolic process;0.000249563957438513!GO:0019717;synaptosome;0.00025763126737869!GO:0006613;cotranslational protein targeting to membrane;0.000266022985500572!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000272689401637037!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.00028302776698926!GO:0031901;early endosome membrane;0.00028499166357965!GO:0051170;nuclear import;0.000318054858527832!GO:0006888;ER to Golgi vesicle-mediated transport;0.00032344375326975!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000326293413608838!GO:0006606;protein import into nucleus;0.000330646260769909!GO:0004721;phosphoprotein phosphatase activity;0.000335565710637817!GO:0016197;endosome transport;0.000353377205445009!GO:0005793;ER-Golgi intermediate compartment;0.000360242200216245!GO:0016481;negative regulation of transcription;0.000364205907089589!GO:0016791;phosphoric monoester hydrolase activity;0.000366198856856283!GO:0007399;nervous system development;0.000375343166742417!GO:0030120;vesicle coat;0.000375343166742417!GO:0030662;coated vesicle membrane;0.000375343166742417!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000396934433323951!GO:0015399;primary active transmembrane transporter activity;0.000396934433323951!GO:0003724;RNA helicase activity;0.000400440451290529!GO:0051028;mRNA transport;0.000412487189534633!GO:0051187;cofactor catabolic process;0.000442036818706835!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000445625240745435!GO:0006084;acetyl-CoA metabolic process;0.000456951729180177!GO:0006732;coenzyme metabolic process;0.000483119891806999!GO:0008601;protein phosphatase type 2A regulator activity;0.000516546734282648!GO:0051179;localization;0.00055514919287045!GO:0030867;rough endoplasmic reticulum membrane;0.000604294779481017!GO:0007049;cell cycle;0.000621740089460485!GO:0000902;cell morphogenesis;0.000639310103167995!GO:0032989;cellular structure morphogenesis;0.000639310103167995!GO:0005798;Golgi-associated vesicle;0.000658262303877746!GO:0031324;negative regulation of cellular metabolic process;0.000756253258120164!GO:0016311;dephosphorylation;0.0007614923062793!GO:0030532;small nuclear ribonucleoprotein complex;0.000792258430645514!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000827749307936939!GO:0006402;mRNA catabolic process;0.000851688381071387!GO:0008026;ATP-dependent helicase activity;0.000860536248153918!GO:0004386;helicase activity;0.000860536248153918!GO:0019208;phosphatase regulator activity;0.000945578104897408!GO:0003713;transcription coactivator activity;0.000962365485948318!GO:0043069;negative regulation of programmed cell death;0.000995519007597352!GO:0051726;regulation of cell cycle;0.00100243358806611!GO:0048468;cell development;0.0010162183287591!GO:0043492;ATPase activity, coupled to movement of substances;0.0010304499798188!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0010395060634434!GO:0051276;chromosome organization and biogenesis;0.00108335576469515!GO:0043066;negative regulation of apoptosis;0.00116053603534509!GO:0007019;microtubule depolymerization;0.00122539743322743!GO:0042802;identical protein binding;0.00123471685594778!GO:0005791;rough endoplasmic reticulum;0.00124812245411887!GO:0006916;anti-apoptosis;0.00129057420918957!GO:0000074;regulation of progression through cell cycle;0.00136227923354992!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00143751243214263!GO:0005839;proteasome core complex (sensu Eukaryota);0.00146371872666784!GO:0003729;mRNA binding;0.00150332123066583!GO:0019902;phosphatase binding;0.0015119759227504!GO:0045892;negative regulation of transcription, DNA-dependent;0.0015126789145686!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.00155187805909972!GO:0004812;aminoacyl-tRNA ligase activity;0.00155187805909972!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.00155187805909972!GO:0008654;phospholipid biosynthetic process;0.0016531680999359!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00174350744988263!GO:0006470;protein amino acid dephosphorylation;0.00175809661791718!GO:0003697;single-stranded DNA binding;0.00175809661791718!GO:0016363;nuclear matrix;0.00179679258159625!GO:0030865;cortical cytoskeleton organization and biogenesis;0.00180316901541019!GO:0051188;cofactor biosynthetic process;0.00180316901541019!GO:0006607;NLS-bearing substrate import into nucleus;0.00194263152384282!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.00198402697994749!GO:0043623;cellular protein complex assembly;0.00201817455203688!GO:0004722;protein serine/threonine phosphatase activity;0.00202319543060218!GO:0005099;Ras GTPase activator activity;0.002027301506975!GO:0005875;microtubule associated complex;0.00207431533325201!GO:0043209;myelin sheath;0.00212291453145614!GO:0051234;establishment of localization;0.00215463378669755!GO:0031111;negative regulation of microtubule polymerization or depolymerization;0.00219283301502873!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00219962357794496!GO:0019222;regulation of metabolic process;0.00220046299306442!GO:0005100;Rho GTPase activator activity;0.00232001929939727!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00235238751478453!GO:0030133;transport vesicle;0.00239100865128085!GO:0046578;regulation of Ras protein signal transduction;0.00239100865128085!GO:0008154;actin polymerization and/or depolymerization;0.00239238517559801!GO:0022890;inorganic cation transmembrane transporter activity;0.00259328548971375!GO:0065002;intracellular protein transport across a membrane;0.00259856242252575!GO:0005741;mitochondrial outer membrane;0.00262512764377127!GO:0043038;amino acid activation;0.00264894659750175!GO:0006418;tRNA aminoacylation for protein translation;0.00264894659750175!GO:0043039;tRNA aminoacylation;0.00264894659750175!GO:0051087;chaperone binding;0.00264894659750175!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.002651867014875!GO:0051129;negative regulation of cellular component organization and biogenesis;0.00278696827907535!GO:0008286;insulin receptor signaling pathway;0.00302865522082171!GO:0006612;protein targeting to membrane;0.00304044984983196!GO:0019867;outer membrane;0.00306280573842421!GO:0005938;cell cortex;0.00308821965023236!GO:0031968;organelle outer membrane;0.00310493375211082!GO:0051168;nuclear export;0.00330754651721014!GO:0005813;centrosome;0.0034391011509029!GO:0019888;protein phosphatase regulator activity;0.00346772723206199!GO:0031114;regulation of microtubule depolymerization;0.00375062818918901!GO:0007026;negative regulation of microtubule depolymerization;0.00375062818918901!GO:0008361;regulation of cell size;0.00375062818918901!GO:0008186;RNA-dependent ATPase activity;0.00375062818918901!GO:0007266;Rho protein signal transduction;0.00381409131231576!GO:0007243;protein kinase cascade;0.00392916466159755!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.00396248457590364!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00396248457590364!GO:0006401;RNA catabolic process;0.00398134519413855!GO:0042254;ribosome biogenesis and assembly;0.00403445225169012!GO:0019904;protein domain specific binding;0.00426346229651724!GO:0007272;ensheathment of neurons;0.00433772168863783!GO:0008366;axon ensheathment;0.00433772168863783!GO:0006650;glycerophospholipid metabolic process;0.00436357576025534!GO:0043087;regulation of GTPase activity;0.00449425516723825!GO:0022406;membrane docking;0.00468780483182283!GO:0048278;vesicle docking;0.00468780483182283!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00487545908202753!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00487545908202753!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00487545908202753!GO:0046930;pore complex;0.00514746791793527!GO:0008139;nuclear localization sequence binding;0.00538104865351938!GO:0048487;beta-tubulin binding;0.0054950143934141!GO:0050811;GABA receptor binding;0.00562153912798233!GO:0051920;peroxiredoxin activity;0.00574849845992274!GO:0031902;late endosome membrane;0.00577662858910255!GO:0006752;group transfer coenzyme metabolic process;0.00599464917917438!GO:0046467;membrane lipid biosynthetic process;0.0060496079034956!GO:0030118;clathrin coat;0.00611044561485886!GO:0006904;vesicle docking during exocytosis;0.0062322994365292!GO:0005815;microtubule organizing center;0.00642040318804554!GO:0030041;actin filament polymerization;0.00642040318804554!GO:0004298;threonine endopeptidase activity;0.00660592807668368!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00663533174826704!GO:0042578;phosphoric ester hydrolase activity;0.00696218145558149!GO:0051789;response to protein stimulus;0.00699742067963325!GO:0006986;response to unfolded protein;0.00699742067963325!GO:0007034;vacuolar transport;0.00704990897640398!GO:0045187;regulation of circadian sleep/wake cycle, sleep;0.00704990897640398!GO:0004667;prostaglandin-D synthase activity;0.00704990897640398!GO:0050802;circadian sleep/wake cycle, sleep;0.00704990897640398!GO:0022410;circadian sleep/wake cycle process;0.00704990897640398!GO:0042749;regulation of circadian sleep/wake cycle;0.00704990897640398!GO:0004674;protein serine/threonine kinase activity;0.00723941914393456!GO:0003690;double-stranded DNA binding;0.0072481154047919!GO:0001508;regulation of action potential;0.00741482209921607!GO:0006974;response to DNA damage stimulus;0.00778130814531204!GO:0016050;vesicle organization and biogenesis;0.00833913342439829!GO:0001666;response to hypoxia;0.00833913342439829!GO:0005048;signal sequence binding;0.0085270968293921!GO:0043021;ribonucleoprotein binding;0.00855987603087552!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00859499714552256!GO:0005885;Arp2/3 protein complex;0.00859499714552256!GO:0016049;cell growth;0.00859499714552256!GO:0033673;negative regulation of kinase activity;0.00930306151334753!GO:0006469;negative regulation of protein kinase activity;0.00930306151334753!GO:0007050;cell cycle arrest;0.00944668881704684!GO:0051427;hormone receptor binding;0.00981907188646925!GO:0004004;ATP-dependent RNA helicase activity;0.00992058539375145!GO:0051261;protein depolymerization;0.0100405026512613!GO:0005774;vacuolar membrane;0.010598660755016!GO:0043005;neuron projection;0.0107967263981168!GO:0019783;small conjugating protein-specific protease activity;0.0109649755904975!GO:0016301;kinase activity;0.0110005035102772!GO:0015980;energy derivation by oxidation of organic compounds;0.0110080456882665!GO:0009108;coenzyme biosynthetic process;0.0112395370853469!GO:0005667;transcription factor complex;0.0119327945005339!GO:0006891;intra-Golgi vesicle-mediated transport;0.0123837824118357!GO:0048500;signal recognition particle;0.0127261523182271!GO:0006643;membrane lipid metabolic process;0.0129303994215448!GO:0007017;microtubule-based process;0.0131500040082068!GO:0051348;negative regulation of transferase activity;0.013557064414212!GO:0009117;nucleotide metabolic process;0.0140328255468551!GO:0043488;regulation of mRNA stability;0.0140328255468551!GO:0043487;regulation of RNA stability;0.0140328255468551!GO:0004843;ubiquitin-specific protease activity;0.0142711860855367!GO:0030742;GTP-dependent protein binding;0.0143291648874347!GO:0030320;cellular monovalent inorganic anion homeostasis;0.0144675789525613!GO:0055083;monovalent inorganic anion homeostasis;0.0144675789525613!GO:0055064;chloride ion homeostasis;0.0144675789525613!GO:0030644;cellular chloride ion homeostasis;0.0144675789525613!GO:0051539;4 iron, 4 sulfur cluster binding;0.0145243467809472!GO:0035257;nuclear hormone receptor binding;0.0165393436811389!GO:0050767;regulation of neurogenesis;0.0172303561779439!GO:0042026;protein refolding;0.0172303561779439!GO:0035035;histone acetyltransferase binding;0.0179625145154361!GO:0005869;dynactin complex;0.0185946722590699!GO:0030384;phosphoinositide metabolic process;0.0188897682522397!GO:0042981;regulation of apoptosis;0.0194055463347021!GO:0051252;regulation of RNA metabolic process;0.0194280007248783!GO:0043067;regulation of programmed cell death;0.0194753252563993!GO:0044448;cell cortex part;0.0196735565426708!GO:0004221;ubiquitin thiolesterase activity;0.019737716755084!GO:0000059;protein import into nucleus, docking;0.019737716755084!GO:0065009;regulation of a molecular function;0.019737716755084!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0201747079337416!GO:0005765;lysosomal membrane;0.0205758902369955!GO:0030258;lipid modification;0.0210143620217698!GO:0000118;histone deacetylase complex;0.0212312508413728!GO:0016563;transcription activator activity;0.021917043072818!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0220187935807046!GO:0008610;lipid biosynthetic process;0.0222288244270385!GO:0016740;transferase activity;0.0226676760576063!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0228922804195987!GO:0030136;clathrin-coated vesicle;0.0234152935082525!GO:0031109;microtubule polymerization or depolymerization;0.0235009750273513!GO:0016126;sterol biosynthetic process;0.0236389241319996!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0239058706758296!GO:0001887;selenium metabolic process;0.0239300939614201!GO:0051540;metal cluster binding;0.0242269625090144!GO:0051536;iron-sulfur cluster binding;0.0242269625090144!GO:0006338;chromatin remodeling;0.024974662834304!GO:0030132;clathrin coat of coated pit;0.025382889848013!GO:0043681;protein import into mitochondrion;0.025382889848013!GO:0032011;ARF protein signal transduction;0.0261392814210928!GO:0032012;regulation of ARF protein signal transduction;0.0261392814210928!GO:0015629;actin cytoskeleton;0.0262903994762617!GO:0006414;translational elongation;0.0263360392929488!GO:0003702;RNA polymerase II transcription factor activity;0.026377858802844!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0267522248117506!GO:0033043;regulation of organelle organization and biogenesis;0.0267522248117506!GO:0030139;endocytic vesicle;0.0267588109652811!GO:0006364;rRNA processing;0.0268099723140916!GO:0019903;protein phosphatase binding;0.0269331591271091!GO:0015682;ferric iron transport;0.0274128527778017!GO:0015091;ferric iron transmembrane transporter activity;0.0274128527778017!GO:0031643;positive regulation of myelination;0.0274128527778017!GO:0017166;vinculin binding;0.0277617098815352!GO:0012506;vesicle membrane;0.0278327691341944!GO:0005788;endoplasmic reticulum lumen;0.0281581050272038!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0282546707765068!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0282546707765068!GO:0006333;chromatin assembly or disassembly;0.0285681688975731!GO:0000062;acyl-CoA binding;0.0288320554386559!GO:0022402;cell cycle process;0.0290690074147806!GO:0005852;eukaryotic translation initiation factor 3 complex;0.0290690074147806!GO:0048154;S100 beta binding;0.0295021312047936!GO:0007041;lysosomal transport;0.0297134968062172!GO:0019911;structural constituent of myelin sheath;0.0298082968812299!GO:0030426;growth cone;0.0299138151896756!GO:0006376;mRNA splice site selection;0.0299138151896756!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0299138151896756!GO:0008022;protein C-terminus binding;0.0308505988659559!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0311396041105899!GO:0006383;transcription from RNA polymerase III promoter;0.031849034919196!GO:0016859;cis-trans isomerase activity;0.0321508446489642!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0324207943680579!GO:0045047;protein targeting to ER;0.0324207943680579!GO:0044437;vacuolar part;0.0330012758495371!GO:0006892;post-Golgi vesicle-mediated transport;0.0330994030195824!GO:0007005;mitochondrion organization and biogenesis;0.0337682402918409!GO:0051287;NAD binding;0.0337684317166785!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0343197369966063!GO:0031124;mRNA 3'-end processing;0.0344292285693115!GO:0000314;organellar small ribosomal subunit;0.0351516095380755!GO:0005763;mitochondrial small ribosomal subunit;0.0351516095380755!GO:0051020;GTPase binding;0.0356166797938095!GO:0006665;sphingolipid metabolic process;0.0365720613878391!GO:0008312;7S RNA binding;0.0366347608059188!GO:0005868;cytoplasmic dynein complex;0.0367467700689981!GO:0030880;RNA polymerase complex;0.0370601705298116!GO:0016072;rRNA metabolic process;0.0374800180356603!GO:0042552;myelination;0.0375666758721356!GO:0030425;dendrite;0.0385680462879774!GO:0003711;transcription elongation regulator activity;0.0385680462879774!GO:0030427;site of polarized growth;0.0385680462879774!GO:0046839;phospholipid dephosphorylation;0.0385680462879774!GO:0003746;translation elongation factor activity;0.0391322488885129!GO:0006399;tRNA metabolic process;0.0391322488885129!GO:0000287;magnesium ion binding;0.0428944765906959!GO:0003725;double-stranded RNA binding;0.0430763029219875!GO:0001558;regulation of cell growth;0.0435842484903907!GO:0007006;mitochondrial membrane organization and biogenesis;0.0435906906908821!GO:0030658;transport vesicle membrane;0.0437094759965216!GO:0005088;Ras guanyl-nucleotide exchange factor activity;0.0437759496249368!GO:0031110;regulation of microtubule polymerization or depolymerization;0.0453412320471473!GO:0030641;cellular hydrogen ion homeostasis;0.0460450054234646!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0465774560494935!GO:0006378;mRNA polyadenylation;0.0471205104103018
+|sample_id=10154
+|sample_note=
+|sample_sex=female
+|sample_species=Human (Homo sapiens)
+|sample_strain=
+|sample_tissue=thalamus
+|top_motifs=SOX2:3.86534744814;SOX5:3.461378557;SOX{8,9,10}:3.09131237355;NFIX:2.94021646835;MYFfamily:2.93576150708;HBP1_HMGB_SSRP1_UBTF:2.89669781429;RREB1:2.89633821491;GATA4:2.89168152212;RFX2..5_RFXANK_RFXAP:2.61044074327;REST:2.57231346844;NHLH1,2:2.5607509101;ATF2:2.52095823459;ZFP161:2.51673685259;MED-1{core}:2.51466038503;CUX2:2.43562026534;FOXP1:2.42931768205;OCT4_SOX2{dimer}:2.40134316771;NKX3-2:2.2780060286;BPTF:2.25911087748;POU6F1:2.24662935831;PRDM1:2.19253351869;GTF2I:2.17496988896;FOXD3:2.13077135139;PATZ1:2.05898430858;DBP:1.98473563488;EGR1..3:1.93322490048;SOX17:1.93298809858;ZBTB6:1.93287740301;ARID5B:1.91342742627;TGIF1:1.9134039267;NKX6-1,2:1.88650123925;MZF1:1.88351173408;AR:1.86319857637;HIC1:1.8526288816;RFX1:1.85226239342;MTE{core}:1.80643283838;FOX{F1,F2,J1}:1.78323369121;TLX2:1.76218839796;FOXQ1:1.75716920482;LMO2:1.75452461671;TOPORS:1.7531699191;RBPJ:1.74741141838;FOXO1,3,4:1.74240458395;PRRX1,2:1.73865327469;FOXP3:1.73292142514;XBP1:1.73273248671;NR3C1:1.73096885276;CDC5L:1.72772477622;TFAP2B:1.69639918585;EP300:1.68969369777;MTF1:1.61954206278;MAFB:1.60516782854;POU5F1:1.54220174082;PAX6:1.53888450981;MAZ:1.53744369173;PAX5:1.53390919096;ZNF384:1.52470334319;FOXM1:1.52122135983;FOX{D1,D2}:1.47533438504;ZBTB16:1.42992903412;PDX1:1.40677918781;SMAD1..7,9:1.39082980657;SREBF1,2:1.34092888057;KLF4:1.27671874952;PAX4:1.25609593413;AHR_ARNT_ARNT2:1.24969292119;LEF1_TCF7_TCF7L1,2:1.21627807951;NRF1:1.20465176948;IKZF2:1.18940682789;T:1.15142833167;ZNF143:1.14673237985;MYBL2:1.14205302851;SP1:1.11569873619;STAT1,3:1.11144470246;HOXA9_MEIS1:1.1061668124;BREu{core}:1.08132617195;NANOG:1.04201093525;ONECUT1,2:1.00367875468;FOX{I1,J2}:0.980330282306;TLX1..3_NFIC{dimer}:0.963841002374;NFIL3:0.963302737517;HOX{A4,D4}:0.878942601814;EBF1:0.85627075483;STAT2,4,6:0.816738132907;SPZ1:0.80672345186;ZNF238:0.788447877673;TFAP2{A,C}:0.782770643116;HOX{A6,A7,B6,B7}:0.776891423695;HSF1,2:0.772468778886;GFI1B:0.709879572147;ALX1:0.69412198059;GTF2A1,2:0.673867196038;ZNF423:0.664802351859;JUN:0.647784365095;IRF7:0.631974541939;GFI1:0.616598915499;HAND1,2:0.568877612431;HMGA1,2:0.562698995638;ADNP_IRX_SIX_ZHX:0.558139879816;CRX:0.536303133423;HMX1:0.506168617447;CREB1:0.500223759158;POU3F1..4:0.498375045498;CDX1,2,4:0.492595246325;TFDP1:0.466783909763;PITX1..3:0.455974197574;ZIC1..3:0.446591296831;GCM1,2:0.398553063571;VSX1,2:0.321283851455;GZF1:0.303046219818;NFY{A,B,C}:0.278991043386;POU1F1:0.242117517306;IRF1,2:0.19697155155;PAX2:0.191735868742;FOXN1:0.189192056296;NKX2-3_NKX2-5:0.138847031298;NFATC1..3:0.0905260462385;RORA:0.0830294578469;FOXA2:0.0700037378929;MEF2{A,B,C,D}:0.00750724260114;TEF:-0.00978290218878;ATF5_CREB3:-0.027934942277;YY1:-0.0536463804356;MYOD1:-0.0591893448349;NKX2-2,8:-0.0804177469975;ZEB1:-0.0818350477541;PBX1:-0.12695524709;XCPE1{core}:-0.169164543468;AIRE:-0.200327922624;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.214342890301;ESRRA:-0.240785127597;UFEwm:-0.253764276022;SPI1:-0.303233928358;LHX3,4:-0.339922685967;SPIB:-0.456046233536;ATF4:-0.468433198149;TFCP2:-0.4746165008;NFE2L2:-0.486198306177;bHLH_family:-0.487597841211;DMAP1_NCOR{1,2}_SMARC:-0.499672678596;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.501181702348;EVI1:-0.5129228136;ETS1,2:-0.515730001303;HNF4A_NR2F1,2:-0.584993766876;FOXL1:-0.603965871496;TFAP4:-0.621391429721;IKZF1:-0.630641321409;NR1H4:-0.631433531477;CEBPA,B_DDIT3:-0.692828151065;NKX3-1:-0.737287638028;HIF1A:-0.753751863979;GATA6:-0.779664964088;NR5A1,2:-0.779848923472;ALX4:-0.795069983465;TP53:-0.795452682741;NFE2:-0.804796788599;NANOG{mouse}:-0.828597520993;PAX1,9:-0.840322546375;TBX4,5:-0.844856496204;SNAI1..3:-0.86719056529;ELK1,4_GABP{A,B1}:-0.931731790618;TEAD1:-0.94362620792;ATF6:-0.945064676818;HNF1A:-0.974126739683;ELF1,2,4:-0.977366696876;NFE2L1:-0.985079705711;FOSL2:-1.01725604751;PAX8:-1.01765977071;RXR{A,B,G}:-1.0430676508;NKX2-1,4:-1.05072895944;E2F1..5:-1.064673931;NFKB1_REL_RELA:-1.0848600766;FOS_FOS{B,L1}_JUN{B,D}:-1.15796914862;PAX3,7:-1.16242993324;BACH2:-1.18898981375;MYB:-1.19671497429;RUNX1..3:-1.20470701193;HLF:-1.20507227615;TBP:-1.27630341695;ESR1:-1.28224355854;POU2F1..3:-1.40305926504;SRF:-1.47479103286;TAL1_TCF{3,4,12}:-1.47761562606;HES1:-1.51767600572;RXRA_VDR{dimer}:-1.52690884268;NR6A1:-1.52889065765;GLI1..3:-1.58244219217;ZNF148:-1.60205141033;STAT5{A,B}:-2.15241197602;EN1,2:-2.25625153805;HOX{A5,B5}:-2.79879489502;PPARG:-2.97514001391
+|xref=
+|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10154-103A1;search_select_hide=table117:FF:10154-103A1
 }}

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FF:10154-103A1: Difference between revisions

From FANTOM5_SSTAR

Latest revision as of 12:22, 3 June 2020

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0