Swissregulon:PAX6.p1: Difference between revisions
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{{SwissregulonMotif | {{SwissregulonMotif | ||
|associated_transcription_factors=1.000:5080:PAX6:paired box 6:PAX:NM_000280:D11S812E,AN,WAGR | |||
|datasource=http://www.swissregulon.unibas.ch/ | |datasource=http://www.swissregulon.unibas.ch/ | ||
|gostat_on_mara_hg19=GO:0005515!protein binding!0.000196606721949093!7080;287;7306;9079;8522;6779;5136;3364;9403;5253;8436;2641;989;221472;57563;3299;4068;10085;10391;2078;27430;2104;7020;6925;6096;996;1602;5156;6445;5787;25788;26137;1191;56122;9369;123228;57502;10210$GO:0007275!multicellular organismal development!0.00107636833325185!7080;3299;10178;9079;8522;10085;6779;3364;7020;11341;1191;6096;56122;2078;1602;6445;5156$GO:0032502!developmental process!0.00482809281151233!7080;9079;8522;6779;3364;7020;11341;6096;1602;6445;5156;221472;3299;10085;10178;1191;2078;56122$GO:0044464!cell part!0.00989353197153766!84867;7080;287;7306;9079;8522;3364;53826;57693;55858;9403;5253;5567;8436;2641;2845;9058;64376;989;221472;92285;9653;3299;4068;10178;10391;58511;2078;1787;54830;27430;23180;2104;5939;5506;8396;7020;9145;6925;6096;996;30820;160335;1602;340596;6445;5156;53344;419;5787;931;10590;25788;26137;1191;4649;36;56122;9369;57502;10210$GO:0043231!intracellular membrane-bound organelle!0.00989353197153766!7080;7306;9079;3364;57693;9403;5253;5567;64376;989;221472;92285;9653;3299;58511;2078;1787;54830;27430;2104;5939;8396;9145;7020;6925;6096;996;160335;1602;25788;26137;36;10210$GO:0043227!membrane-bound organelle!0.00989353197153766!7080;7306;9079;3364;57693;9403;5253;5567;64376;989;221472;92285;9653;3299;58511;2078;1787;54830;27430;2104;5939;8396;9145;7020;6925;6096;996;160335;1602;25788;26137;36;10210$GO:0048731!system development!0.00989353197153766!7080;3299;10178;8522;6779;7020;11341;1191;6096;56122;6445;5156$GO:0048856!anatomical structure development!0.0136086477336926!221472;7080;3299;10178;8522;6779;7020;11341;1191;6096;56122;6445;5156$GO:0043229!intracellular organelle!0.0136086477336926!7080;287;7306;9079;3364;57693;9403;5253;5567;64376;989;221472;92285;9653;3299;10391;58511;2078;1787;54830;27430;2104;5939;8396;9145;7020;6925;6096;996;160335;1602;6445;53344;25788;26137;36;10210$GO:0043226!organelle!0.0136086477336926!7080;287;7306;9079;3364;57693;9403;5253;5567;64376;989;221472;92285;9653;3299;10391;58511;2078;1787;54830;27430;2104;5939;8396;9145;7020;6925;6096;996;160335;1602;6445;53344;25788;26137;36;10210$GO:0044424!intracellular part!0.0136086477336926!7080;287;7306;9079;8522;3364;57693;9403;5253;5567;8436;64376;989;221472;92285;9653;3299;4068;10391;58511;2078;1787;54830;27430;2104;5939;8396;7020;9145;6925;6096;996;160335;1602;6445;53344;10590;25788;26137;1191;36;10210$GO:0032501!multicellular organismal process!0.0136086477336926!7080;9079;8522;6779;3364;7020;11341;6096;30820;1602;6445;5156;3299;10085;10178;1191;2078;56122$GO:0000724!double-strand break repair via homologous recombination!0.0136086477336926!3364;25788$GO:0000725!recombinational repair!0.0136086477336926!3364;25788$GO:0005634!nucleus!0.0267421202419288!7080;9079;2104;5939;3364;57693;7020;6925;5253;6096;5567;996;1602;64376;989;92285;3299;25788;26137;2078;1787;54830;27430;10210$GO:0008283!cell proliferation!0.0375093920788937!1191;3299;10178;2641;2078;996;5156$GO:0003677!DNA binding!0.0458478812923411!7080;8522;2104;57693;7020;5253;6925;6096;1602;64376;3299;25788;26137;2078;1787;10210$GO:0045893!positive regulation of transcription, DNA-dependent!0.0458478812923411!6925;6096;7080;2104$GO:0048270!methionine adenosyltransferase regulator activity!0.0494046831946541!27430$GO:0015361!low affinity sodium:dicarboxylate symporter activity!0.0494046831946541!9058$GO:0048407!platelet-derived growth factor binding!0.0494046831946541!5156$GO:0048269!methionine adenosyltransferase complex!0.0494046831946541!27430$GO:0008831!dTDP-4-dehydrorhamnose reductase activity!0.0494046831946541!27430$GO:0015616!DNA translocase activity!0.0494046831946541!25788$GO:0017033!DNA topoisomerase I binding!0.0494046831946541!10210$GO:0005018!platelet-derived growth factor alpha-receptor activity!0.0494046831946541!5156$GO:0045226!extracellular polysaccharide biosynthetic process!0.0494046831946541!27430$GO:0046379!extracellular polysaccharide metabolic process!0.0494046831946541!27430$GO:0003834!beta-carotene 15,15'-monooxygenase activity!0.0494046831946541!53630$GO:0035270!endocrine system development!0.0494046831946541!1191;7080 | |||
|gostat_on_mara_mm9=GO:0003700!transcription factor activity!0.0126224389073343!15424;21869;110796;18986;209357;225998;231044;18420;13134 | |||
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| |||
|name=PAX6.p1 | |name=PAX6.p1 | ||
|weight_matrix=NA:PAX6.p1;PO:A:C:G:T;01:4.819742:16.426548:5.917373:98.093058;02:3.181935:10.63968:0.78762:110.647486;03:12.820355:63.753414:7.70496:40.977992;04:94.975228:14.623409:7.650491:8.007593;05:16.299823:69.86058:8.997892:30.098426;06:21.889397:3.194027:85.726339:14.446958;07:5.369579:93.944502:14.2896:11.65304;08:39.248957:8.867264:11.337591:65.802909;09:7.452571:14.741566:1.49044:101.572144;10:12.641904:43.727733:60.294309:8.592775;11:99.181012:1.656797:20.517868:3.901044;12:29.133748:40.335387:19.713163:36.074423;13:4.61715:15.647156:5.427617:99.564798;14:5.193436:0.751316:39.447971:79.863998 | |weight_matrix=NA:PAX6.p1;PO:A:C:G:T;01:4.819742:16.426548:5.917373:98.093058;02:3.181935:10.63968:0.78762:110.647486;03:12.820355:63.753414:7.70496:40.977992;04:94.975228:14.623409:7.650491:8.007593;05:16.299823:69.86058:8.997892:30.098426;06:21.889397:3.194027:85.726339:14.446958;07:5.369579:93.944502:14.2896:11.65304;08:39.248957:8.867264:11.337591:65.802909;09:7.452571:14.741566:1.49044:101.572144;10:12.641904:43.727733:60.294309:8.592775;11:99.181012:1.656797:20.517868:3.901044;12:29.133748:40.335387:19.713163:36.074423;13:4.61715:15.647156:5.427617:99.564798;14:5.193436:0.751316:39.447971:79.863998 | ||
}} | }} |
Latest revision as of 09:57, 17 April 2012
Motif matrix | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Motif Activities (MARA) on Phase1 data
hg19
Chart |
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Sample of clicked point: |
mm9
Z-value table | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Chart |
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Sample of clicked point: |
GOStat results on predicted Motif target
hg19 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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mm9 | ||||
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