FF:10045-101F9: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005649 | ||
|accession_numbers=CAGE;DRX008671;DRR009543;DRZ000968;DRZ002353;DRZ012318;DRZ013703 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0002113,UBERON:0002100,UBERON:0000479,UBERON:0000062,UBERON:0000475,UBERON:0006554,UBERON:0000061,UBERON:0000465,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0003103,UBERON:0009569,UBERON:0000489,UBERON:0005177,UBERON:0005172,UBERON:0005173,UBERON:0011143,UBERON:0001008,UBERON:0002417,UBERON:0000916 | |||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000999,FF:0000004,FF:0010045 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/kidney%252c%2520fetal%252c%2520pool1.CNhs10652.10045-101F9.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/kidney%252c%2520fetal%252c%2520pool1.CNhs10652.10045-101F9.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/kidney%252c%2520fetal%252c%2520pool1.CNhs10652.10045-101F9.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/kidney%252c%2520fetal%252c%2520pool1.CNhs10652.10045-101F9.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/kidney%252c%2520fetal%252c%2520pool1.CNhs10652.10045-101F9.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10045-101F9 | |id=FF:10045-101F9 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0010045 | ||
|is_obsolete= | |||
|library_id=CNhs10652 | |||
|library_id_phase_based=2:CNhs10652 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10045 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10045 | |||
|name=kidney, fetal, pool1 | |name=kidney, fetal, pool1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs10652,LSID658,release008,COMPLETED | |profile_hcage=CNhs10652,LSID658,release008,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=101 | |rna_box=101 | ||
|rna_catalog_number=Cat:636584 | |rna_catalog_number=Cat:636584 | ||
| Line 57: | Line 79: | ||
|rna_weight_ug=50 | |rna_weight_ug=50 | ||
|sample_age= | |sample_age= | ||
|sample_category=tissues | |||
|sample_cell_catalog=NA | |sample_cell_catalog=NA | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity=C | |sample_ethnicity=C | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;1.42182598409278e-225!GO:0005737;cytoplasm;2.21932502221911e-170!GO:0043226;organelle;7.94044200521596e-137!GO:0043229;intracellular organelle;1.47192124360725e-136!GO:0043231;intracellular membrane-bound organelle;1.64584603803367e-135!GO:0043227;membrane-bound organelle;1.94945908355533e-135!GO:0044444;cytoplasmic part;5.20391314644544e-118!GO:0005515;protein binding;7.17702581931504e-88!GO:0044422;organelle part;6.65667458663099e-81!GO:0044446;intracellular organelle part;1.27865018004218e-79!GO:0044237;cellular metabolic process;5.41850446498888e-67!GO:0044238;primary metabolic process;7.5343984192691e-66!GO:0032991;macromolecular complex;2.24991454948737e-54!GO:0043170;macromolecule metabolic process;1.11363964592866e-53!GO:0005739;mitochondrion;4.53729925095864e-53!GO:0043233;organelle lumen;2.51110498635596e-43!GO:0031974;membrane-enclosed lumen;2.51110498635596e-43!GO:0016043;cellular component organization and biogenesis;4.54344272229448e-43!GO:0030529;ribonucleoprotein complex;5.86342469311561e-42!GO:0031090;organelle membrane;5.28763998093988e-41!GO:0005634;nucleus;3.44613947536555e-39!GO:0019538;protein metabolic process;3.38563493695305e-38!GO:0044428;nuclear part;4.20921338502853e-38!GO:0003723;RNA binding;7.90126290685718e-38!GO:0044429;mitochondrial part;3.74510522269026e-35!GO:0033036;macromolecule localization;4.74682246114577e-34!GO:0044260;cellular macromolecule metabolic process;6.92620350700652e-33!GO:0015031;protein transport;8.749884034886e-33!GO:0031967;organelle envelope;1.43287512275147e-32!GO:0031975;envelope;2.4466692470549e-32!GO:0044267;cellular protein metabolic process;6.83978560204061e-32!GO:0008104;protein localization;2.47194714053493e-31!GO:0045184;establishment of protein localization;2.43216933222081e-30!GO:0043234;protein complex;2.30563997342188e-29!GO:0005829;cytosol;2.16815242685211e-26!GO:0046907;intracellular transport;2.62857986654397e-26!GO:0009058;biosynthetic process;4.27811764270225e-26!GO:0005840;ribosome;2.71914996508294e-25!GO:0065003;macromolecular complex assembly;3.54240424075727e-25!GO:0043283;biopolymer metabolic process;3.91279700601467e-25!GO:0016071;mRNA metabolic process;4.26284663423705e-25!GO:0019866;organelle inner membrane;5.44774763784665e-24!GO:0005740;mitochondrial envelope;5.90276954638712e-24!GO:0031966;mitochondrial membrane;2.75657684742714e-23!GO:0006412;translation;3.09915123606688e-23!GO:0008380;RNA splicing;3.48971437090743e-23!GO:0031981;nuclear lumen;5.39727594956297e-23!GO:0006886;intracellular protein transport;8.58475821454871e-23!GO:0022607;cellular component assembly;8.81822617663761e-23!GO:0044249;cellular biosynthetic process;8.81822617663761e-23!GO:0010467;gene expression;9.16264950074605e-23!GO:0005743;mitochondrial inner membrane;1.11151073694947e-22!GO:0006396;RNA processing;3.20676119837118e-22!GO:0003735;structural constituent of ribosome;1.89907331105939e-21!GO:0009059;macromolecule biosynthetic process;3.26213220684528e-21!GO:0006397;mRNA processing;3.8090165846995e-20!GO:0006996;organelle organization and biogenesis;6.21798021245629e-20!GO:0033279;ribosomal subunit;8.79914600114335e-20!GO:0006119;oxidative phosphorylation;1.85017831097685e-19!GO:0008134;transcription factor binding;2.42961793043713e-19!GO:0048770;pigment granule;1.69688584572829e-18!GO:0042470;melanosome;1.69688584572829e-18!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;2.38259888956303e-17!GO:0005794;Golgi apparatus;2.61266227942926e-17!GO:0051649;establishment of cellular localization;2.26578429863496e-16!GO:0051641;cellular localization;2.6201652143048e-16!GO:0005681;spliceosome;2.73368004114264e-16!GO:0005783;endoplasmic reticulum;4.16340481893901e-16!GO:0005830;cytosolic ribosome (sensu Eukaryota);6.07920085252633e-16!GO:0016192;vesicle-mediated transport;6.67311276212756e-16!GO:0005654;nucleoplasm;8.24619251978139e-16!GO:0044248;cellular catabolic process;1.66574791011738e-15!GO:0031980;mitochondrial lumen;3.60762606153943e-15!GO:0005759;mitochondrial matrix;3.60762606153943e-15!GO:0012505;endomembrane system;5.15548308976441e-15!GO:0044265;cellular macromolecule catabolic process;7.17561702908732e-15!GO:0044445;cytosolic part;2.92825184363442e-14!GO:0048523;negative regulation of cellular process;2.3796581844932e-13!GO:0051186;cofactor metabolic process;3.20295511000035e-13!GO:0043228;non-membrane-bound organelle;3.80392927028867e-13!GO:0043232;intracellular non-membrane-bound organelle;3.80392927028867e-13!GO:0044451;nucleoplasm part;4.32301816634314e-13!GO:0044455;mitochondrial membrane part;4.61095477142209e-13!GO:0050794;regulation of cellular process;5.32250182922048e-13!GO:0016874;ligase activity;5.77761354870073e-13!GO:0003712;transcription cofactor activity;7.86630532699012e-13!GO:0000166;nucleotide binding;8.58157168783067e-13!GO:0005746;mitochondrial respiratory chain;1.09096971324485e-12!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.7162229549277e-12!GO:0009057;macromolecule catabolic process;4.04755270396503e-12!GO:0048193;Golgi vesicle transport;1.01691852483276e-11!GO:0043412;biopolymer modification;1.01691852483276e-11!GO:0015935;small ribosomal subunit;1.13132735862385e-11!GO:0050136;NADH dehydrogenase (quinone) activity;1.19632833603014e-11!GO:0003954;NADH dehydrogenase activity;1.19632833603014e-11!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.19632833603014e-11!GO:0006605;protein targeting;1.65137445270081e-11!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.02035320747554e-11!GO:0048519;negative regulation of biological process;2.42612524164342e-11!GO:0050789;regulation of biological process;2.44574744757719e-11!GO:0006464;protein modification process;2.5616442753735e-11!GO:0006732;coenzyme metabolic process;2.92157761114752e-11!GO:0006461;protein complex assembly;3.03044201269896e-11!GO:0051603;proteolysis involved in cellular protein catabolic process;3.23177522749712e-11!GO:0006511;ubiquitin-dependent protein catabolic process;4.46503278304086e-11!GO:0019941;modification-dependent protein catabolic process;5.93666449116299e-11!GO:0043632;modification-dependent macromolecule catabolic process;5.93666449116299e-11!GO:0006512;ubiquitin cycle;6.03015694793577e-11!GO:0043285;biopolymer catabolic process;7.89187254625477e-11!GO:0044257;cellular protein catabolic process;9.65163196591218e-11!GO:0006457;protein folding;1.22973944169374e-10!GO:0016070;RNA metabolic process;1.54233131912934e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;1.60793038720328e-10!GO:0009056;catabolic process;2.14293985159995e-10!GO:0043687;post-translational protein modification;2.34954667010489e-10!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;3.33164671311676e-10!GO:0031982;vesicle;3.33164671311676e-10!GO:0030036;actin cytoskeleton organization and biogenesis;4.17027708828274e-10!GO:0006366;transcription from RNA polymerase II promoter;5.61161311535977e-10!GO:0031410;cytoplasmic vesicle;5.77763794856084e-10!GO:0031988;membrane-bound vesicle;6.79045112853066e-10!GO:0044432;endoplasmic reticulum part;6.93586090188444e-10!GO:0022618;protein-RNA complex assembly;7.24931335792905e-10!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;7.49178225476542e-10!GO:0042775;organelle ATP synthesis coupled electron transport;8.48100967908105e-10!GO:0042773;ATP synthesis coupled electron transport;8.48100967908105e-10!GO:0030964;NADH dehydrogenase complex (quinone);8.48100967908105e-10!GO:0045271;respiratory chain complex I;8.48100967908105e-10!GO:0005747;mitochondrial respiratory chain complex I;8.48100967908105e-10!GO:0016023;cytoplasmic membrane-bound vesicle;9.78227650331471e-10!GO:0005635;nuclear envelope;1.74673086299133e-09!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.97557442939313e-09!GO:0006913;nucleocytoplasmic transport;2.02599493828694e-09!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.22424775278133e-09!GO:0016462;pyrophosphatase activity;2.2271742640201e-09!GO:0030163;protein catabolic process;2.40217888468778e-09!GO:0005773;vacuole;2.55077882277467e-09!GO:0016564;transcription repressor activity;2.77024386163858e-09!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.82472762940579e-09!GO:0016817;hydrolase activity, acting on acid anhydrides;2.89825651455745e-09!GO:0006793;phosphorus metabolic process;3.27903407745132e-09!GO:0006796;phosphate metabolic process;3.27903407745132e-09!GO:0015934;large ribosomal subunit;3.80712509281106e-09!GO:0030029;actin filament-based process;4.60991757140007e-09!GO:0008565;protein transporter activity;4.6891852400303e-09!GO:0065007;biological regulation;5.07736375574384e-09!GO:0051169;nuclear transport;5.26004365764674e-09!GO:0008092;cytoskeletal protein binding;5.32784956472083e-09!GO:0051082;unfolded protein binding;6.12128211956235e-09!GO:0003676;nucleic acid binding;6.29570203465063e-09!GO:0016604;nuclear body;6.32964324582293e-09!GO:0015986;ATP synthesis coupled proton transport;6.68545801455059e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;6.68545801455059e-09!GO:0006325;establishment and/or maintenance of chromatin architecture;6.88083339056611e-09!GO:0017111;nucleoside-triphosphatase activity;7.89672920537304e-09!GO:0009055;electron carrier activity;9.52045807711115e-09!GO:0005793;ER-Golgi intermediate compartment;9.97905292012302e-09!GO:0012501;programmed cell death;1.22490407810088e-08!GO:0016044;membrane organization and biogenesis;1.34342861229869e-08!GO:0016607;nuclear speck;1.54787718890881e-08!GO:0006259;DNA metabolic process;1.56191288445785e-08!GO:0000398;nuclear mRNA splicing, via spliceosome;1.8302289821402e-08!GO:0000375;RNA splicing, via transesterification reactions;1.8302289821402e-08!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.8302289821402e-08!GO:0006915;apoptosis;1.90729963671899e-08!GO:0005768;endosome;2.01230528838827e-08!GO:0045333;cellular respiration;2.34490635145739e-08!GO:0008135;translation factor activity, nucleic acid binding;2.56920140514137e-08!GO:0003714;transcription corepressor activity;2.8331426728732e-08!GO:0031965;nuclear membrane;3.26626982253239e-08!GO:0032553;ribonucleotide binding;3.76785130285478e-08!GO:0032555;purine ribonucleotide binding;3.76785130285478e-08!GO:0008219;cell death;4.49763675444698e-08!GO:0016265;death;4.49763675444698e-08!GO:0016469;proton-transporting two-sector ATPase complex;4.53551534609523e-08!GO:0009060;aerobic respiration;4.53551534609523e-08!GO:0016563;transcription activator activity;4.58658793071674e-08!GO:0006323;DNA packaging;4.75469591560301e-08!GO:0000502;proteasome complex (sensu Eukaryota);5.19715079502216e-08!GO:0017076;purine nucleotide binding;5.28592596945823e-08!GO:0008639;small protein conjugating enzyme activity;6.23553661983914e-08!GO:0004842;ubiquitin-protein ligase activity;6.59704300148358e-08!GO:0019829;cation-transporting ATPase activity;6.9610633791216e-08!GO:0031252;leading edge;1.75757525119053e-07!GO:0015078;hydrogen ion transmembrane transporter activity;1.89183971907311e-07!GO:0031324;negative regulation of cellular metabolic process;1.89183971907311e-07!GO:0006082;organic acid metabolic process;1.95623253486087e-07!GO:0009892;negative regulation of metabolic process;1.96636925826054e-07!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.15301490604972e-07!GO:0000323;lytic vacuole;2.62781564091355e-07!GO:0005764;lysosome;2.62781564091355e-07!GO:0019787;small conjugating protein ligase activity;2.69956917222391e-07!GO:0017038;protein import;2.79661915304502e-07!GO:0006754;ATP biosynthetic process;3.63889125993147e-07!GO:0006753;nucleoside phosphate metabolic process;3.63889125993147e-07!GO:0019752;carboxylic acid metabolic process;3.63889125993147e-07!GO:0006099;tricarboxylic acid cycle;3.86554877784488e-07!GO:0046356;acetyl-CoA catabolic process;3.86554877784488e-07!GO:0006446;regulation of translational initiation;4.66069555892686e-07!GO:0007264;small GTPase mediated signal transduction;5.40069985472261e-07!GO:0005789;endoplasmic reticulum membrane;5.93044007452821e-07!GO:0016310;phosphorylation;5.95933844241793e-07!GO:0005730;nucleolus;6.57986101115351e-07!GO:0016481;negative regulation of transcription;6.652981320893e-07!GO:0042175;nuclear envelope-endoplasmic reticulum network;6.66022618004446e-07!GO:0043069;negative regulation of programmed cell death;7.40265522333643e-07!GO:0006357;regulation of transcription from RNA polymerase II promoter;7.4599818317613e-07!GO:0051187;cofactor catabolic process;8.79275641035771e-07!GO:0048475;coated membrane;8.82030301853862e-07!GO:0030117;membrane coat;8.82030301853862e-07!GO:0009109;coenzyme catabolic process;1.01558275569493e-06!GO:0043066;negative regulation of apoptosis;1.07314428482645e-06!GO:0015980;energy derivation by oxidation of organic compounds;1.35563043599289e-06!GO:0006084;acetyl-CoA metabolic process;1.4688444715901e-06!GO:0046034;ATP metabolic process;1.4706038578062e-06!GO:0005761;mitochondrial ribosome;1.4706038578062e-06!GO:0000313;organellar ribosome;1.4706038578062e-06!GO:0051246;regulation of protein metabolic process;1.5331366327792e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.58433220074112e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.58433220074112e-06!GO:0016879;ligase activity, forming carbon-nitrogen bonds;1.79509430749251e-06!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.79509430749251e-06!GO:0006752;group transfer coenzyme metabolic process;1.84816166316525e-06!GO:0003743;translation initiation factor activity;1.92625202433933e-06!GO:0006163;purine nucleotide metabolic process;2.065392950288e-06!GO:0009142;nucleoside triphosphate biosynthetic process;2.08897509466463e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;2.08897509466463e-06!GO:0009150;purine ribonucleotide metabolic process;2.4330250437353e-06!GO:0006897;endocytosis;2.58859177754955e-06!GO:0010324;membrane invagination;2.58859177754955e-06!GO:0051276;chromosome organization and biogenesis;2.72426610303479e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;3.25953969774865e-06!GO:0009144;purine nucleoside triphosphate metabolic process;3.25953969774865e-06!GO:0006164;purine nucleotide biosynthetic process;3.57494470844212e-06!GO:0006888;ER to Golgi vesicle-mediated transport;3.57494470844212e-06!GO:0005524;ATP binding;3.58025475921917e-06!GO:0032559;adenyl ribonucleotide binding;3.68490940864889e-06!GO:0019899;enzyme binding;3.78278195149733e-06!GO:0051188;cofactor biosynthetic process;3.92004537606815e-06!GO:0009152;purine ribonucleotide biosynthetic process;3.98336179217626e-06!GO:0009199;ribonucleoside triphosphate metabolic process;4.03181394408465e-06!GO:0009259;ribonucleotide metabolic process;4.06642996577969e-06!GO:0003713;transcription coactivator activity;4.18024940923968e-06!GO:0016881;acid-amino acid ligase activity;5.0364947438534e-06!GO:0044440;endosomal part;5.07253011285127e-06!GO:0010008;endosome membrane;5.07253011285127e-06!GO:0009141;nucleoside triphosphate metabolic process;5.8872131314843e-06!GO:0044453;nuclear membrane part;5.92671573964157e-06!GO:0030554;adenyl nucleotide binding;6.05081261579663e-06!GO:0016568;chromatin modification;6.27131272479899e-06!GO:0006413;translational initiation;6.97371696932074e-06!GO:0030120;vesicle coat;7.17130661136416e-06!GO:0030662;coated vesicle membrane;7.17130661136416e-06!GO:0006606;protein import into nucleus;8.73836290546804e-06!GO:0006333;chromatin assembly or disassembly;1.02256316152076e-05!GO:0042802;identical protein binding;1.03779414557295e-05!GO:0009260;ribonucleotide biosynthetic process;1.10436561905841e-05!GO:0051170;nuclear import;1.33844569091323e-05!GO:0006916;anti-apoptosis;1.44691475113531e-05!GO:0016491;oxidoreductase activity;1.49299005514907e-05!GO:0003779;actin binding;1.64772323803124e-05!GO:0045893;positive regulation of transcription, DNA-dependent;1.64772323803124e-05!GO:0005083;small GTPase regulator activity;1.73896763105259e-05!GO:0044431;Golgi apparatus part;1.75071130380163e-05!GO:0007010;cytoskeleton organization and biogenesis;1.79323855587843e-05!GO:0005905;coated pit;2.12473399627875e-05!GO:0005643;nuclear pore;2.35011984112876e-05!GO:0048471;perinuclear region of cytoplasm;2.46314213584147e-05!GO:0001666;response to hypoxia;2.52505480270355e-05!GO:0042623;ATPase activity, coupled;2.8199082067922e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.98240223039894e-05!GO:0044262;cellular carbohydrate metabolic process;2.98240223039894e-05!GO:0016740;transferase activity;2.99041601794178e-05!GO:0045892;negative regulation of transcription, DNA-dependent;3.38154322555549e-05!GO:0051427;hormone receptor binding;4.11337639591571e-05!GO:0045259;proton-transporting ATP synthase complex;4.13974663130994e-05!GO:0050657;nucleic acid transport;4.13974663130994e-05!GO:0051236;establishment of RNA localization;4.13974663130994e-05!GO:0050658;RNA transport;4.13974663130994e-05!GO:0006403;RNA localization;4.34343691021522e-05!GO:0007265;Ras protein signal transduction;4.40226552195221e-05!GO:0042981;regulation of apoptosis;4.75228010671132e-05!GO:0016887;ATPase activity;5.0378941641413e-05!GO:0065004;protein-DNA complex assembly;5.19216261854693e-05!GO:0009108;coenzyme biosynthetic process;5.85794288318923e-05!GO:0008361;regulation of cell size;6.37166907200102e-05!GO:0005770;late endosome;6.38610511376248e-05!GO:0006091;generation of precursor metabolites and energy;6.38610511376248e-05!GO:0032446;protein modification by small protein conjugation;6.46998091536015e-05!GO:0043067;regulation of programmed cell death;6.62356376378397e-05!GO:0016049;cell growth;6.66763098585652e-05!GO:0035257;nuclear hormone receptor binding;7.73860478350651e-05!GO:0007049;cell cycle;7.84141359227674e-05!GO:0019222;regulation of metabolic process;8.1994070805303e-05!GO:0045941;positive regulation of transcription;8.86471466820967e-05!GO:0016567;protein ubiquitination;9.35957010558613e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;9.44648005521811e-05!GO:0000785;chromatin;9.52307150471785e-05!GO:0005774;vacuolar membrane;9.98437505459997e-05!GO:0043566;structure-specific DNA binding;0.000103540796515518!GO:0001558;regulation of cell growth;0.000109794639386837!GO:0007243;protein kinase cascade;0.000124043035210087!GO:0000151;ubiquitin ligase complex;0.000142192535122483!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000145258502026477!GO:0045786;negative regulation of progression through cell cycle;0.000148702154342817!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.000161553341813819!GO:0030695;GTPase regulator activity;0.000169861475927907!GO:0003924;GTPase activity;0.000184354429056493!GO:0065002;intracellular protein transport across a membrane;0.00019537794903704!GO:0009966;regulation of signal transduction;0.000201752259452806!GO:0008286;insulin receptor signaling pathway;0.000204824052389425!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000211800463741674!GO:0030532;small nuclear ribonucleoprotein complex;0.000235879734115323!GO:0006613;cotranslational protein targeting to membrane;0.00023728272029541!GO:0051789;response to protein stimulus;0.000241145631873948!GO:0006986;response to unfolded protein;0.000241145631873948!GO:0005788;endoplasmic reticulum lumen;0.000243630123289006!GO:0030867;rough endoplasmic reticulum membrane;0.000245189344157796!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.000254867609315787!GO:0044255;cellular lipid metabolic process;0.000257500312274529!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.000274269188695151!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.000277429346495336!GO:0046930;pore complex;0.000280215460469797!GO:0008654;phospholipid biosynthetic process;0.000280718756559066!GO:0005798;Golgi-associated vesicle;0.000302371729113051!GO:0048522;positive regulation of cellular process;0.000348608353833835!GO:0004386;helicase activity;0.000349147590008113!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000384352980081261!GO:0006334;nucleosome assembly;0.000402915493111152!GO:0008154;actin polymerization and/or depolymerization;0.000420428813449298!GO:0005525;GTP binding;0.000421899493534107!GO:0005996;monosaccharide metabolic process;0.000446201601927627!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.000446201601927627!GO:0004812;aminoacyl-tRNA ligase activity;0.000446201601927627!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.000446201601927627!GO:0019318;hexose metabolic process;0.000475365847367582!GO:0000245;spliceosome assembly;0.000489751984945897!GO:0007167;enzyme linked receptor protein signaling pathway;0.000507665737201872!GO:0030027;lamellipodium;0.000513655326754385!GO:0051028;mRNA transport;0.000516593946705881!GO:0005923;tight junction;0.000519920660281898!GO:0030118;clathrin coat;0.000546981362661933!GO:0051128;regulation of cellular component organization and biogenesis;0.000562761392111731!GO:0000139;Golgi membrane;0.000565545112355349!GO:0008026;ATP-dependent helicase activity;0.000565545112355349!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000569848670275618!GO:0005791;rough endoplasmic reticulum;0.000577020022477125!GO:0022890;inorganic cation transmembrane transporter activity;0.00059258927834536!GO:0003697;single-stranded DNA binding;0.00059340006623644!GO:0016327;apicolateral plasma membrane;0.000638136298940691!GO:0007266;Rho protein signal transduction;0.000646861005319186!GO:0043296;apical junction complex;0.000665154751545345!GO:0031497;chromatin assembly;0.000669620183530706!GO:0044437;vacuolar part;0.000672707659535642!GO:0030133;transport vesicle;0.000682098021320061!GO:0008250;oligosaccharyl transferase complex;0.000699902512487005!GO:0035258;steroid hormone receptor binding;0.000777111670081025!GO:0000096;sulfur amino acid metabolic process;0.000792662534733219!GO:0043038;amino acid activation;0.000800394542046142!GO:0006418;tRNA aminoacylation for protein translation;0.000800394542046142!GO:0043039;tRNA aminoacylation;0.000800394542046142!GO:0030100;regulation of endocytosis;0.000833071159554482!GO:0033116;ER-Golgi intermediate compartment membrane;0.000877151214617978!GO:0005667;transcription factor complex;0.000924715504386784!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000925395842387655!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000990819331031959!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.000998772586551086!GO:0003724;RNA helicase activity;0.00101201543244168!GO:0051287;NAD binding;0.0010234739085555!GO:0051726;regulation of cell cycle;0.00106179764115769!GO:0005938;cell cortex;0.00106179764115769!GO:0043623;cellular protein complex assembly;0.00108844536363444!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00114375885863229!GO:0004177;aminopeptidase activity;0.00126457128690348!GO:0000074;regulation of progression through cell cycle;0.00135028741820798!GO:0040008;regulation of growth;0.00143441563708518!GO:0048518;positive regulation of biological process;0.00146776657842977!GO:0006066;alcohol metabolic process;0.00152075593521173!GO:0001726;ruffle;0.0015585021490566!GO:0006629;lipid metabolic process;0.00156967881477319!GO:0006950;response to stress;0.00157527823769404!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.00163421164845731!GO:0009117;nucleotide metabolic process;0.00166934758678353!GO:0006402;mRNA catabolic process;0.00168110362956848!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.00169713839224194!GO:0051920;peroxiredoxin activity;0.00173273722692286!GO:0004576;oligosaccharyl transferase activity;0.00185193471567636!GO:0005839;proteasome core complex (sensu Eukaryota);0.0019209927657863!GO:0050662;coenzyme binding;0.00193338198815781!GO:0005769;early endosome;0.00195717454457029!GO:0007005;mitochondrion organization and biogenesis;0.0019630530062536!GO:0030521;androgen receptor signaling pathway;0.00205812325207585!GO:0003702;RNA polymerase II transcription factor activity;0.00214873581302445!GO:0051270;regulation of cell motility;0.0022078510215178!GO:0032561;guanyl ribonucleotide binding;0.00222794499361403!GO:0019001;guanyl nucleotide binding;0.00222794499361403!GO:0007169;transmembrane receptor protein tyrosine kinase signaling pathway;0.00224560774255398!GO:0051168;nuclear export;0.00229320336240118!GO:0048037;cofactor binding;0.00239689923253296!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00245817486303051!GO:0008610;lipid biosynthetic process;0.00259009535409537!GO:0007242;intracellular signaling cascade;0.00262589345176415!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00264045934506909!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00264045934506909!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00264045934506909!GO:0005741;mitochondrial outer membrane;0.00275820285613374!GO:0016791;phosphoric monoester hydrolase activity;0.00275820285613374!GO:0019843;rRNA binding;0.00276931990103338!GO:0030134;ER to Golgi transport vesicle;0.0028493426826881!GO:0051179;localization;0.00292020714787744!GO:0015992;proton transport;0.00293594962895042!GO:0006818;hydrogen transport;0.00322111747955867!GO:0006979;response to oxidative stress;0.00327042486035405!GO:0033673;negative regulation of kinase activity;0.00329787111780406!GO:0006469;negative regulation of protein kinase activity;0.00329787111780406!GO:0015630;microtubule cytoskeleton;0.00342902314737332!GO:0016853;isomerase activity;0.00345718338472756!GO:0006612;protein targeting to membrane;0.00353962851722558!GO:0006807;nitrogen compound metabolic process;0.00360977087510988!GO:0006006;glucose metabolic process;0.0038240569094461!GO:0006643;membrane lipid metabolic process;0.00408858439168969!GO:0006595;polyamine metabolic process;0.00427988531856127!GO:0065009;regulation of a molecular function;0.00451344817323026!GO:0006520;amino acid metabolic process;0.0045195739012081!GO:0015629;actin cytoskeleton;0.00466014856859119!GO:0048468;cell development;0.00466014856859119!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0047447591005307!GO:0008186;RNA-dependent ATPase activity;0.00492663500077204!GO:0032787;monocarboxylic acid metabolic process;0.00511442766464108!GO:0043488;regulation of mRNA stability;0.00523956305480246!GO:0043487;regulation of RNA stability;0.00523956305480246!GO:0030131;clathrin adaptor complex;0.00523956305480246!GO:0051056;regulation of small GTPase mediated signal transduction;0.00530464192703229!GO:0008047;enzyme activator activity;0.00538739117300831!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00545077654956196!GO:0030119;AP-type membrane coat adaptor complex;0.00550211084978828!GO:0042254;ribosome biogenesis and assembly;0.0056539709416842!GO:0006650;glycerophospholipid metabolic process;0.00565481256770288!GO:0005096;GTPase activator activity;0.00574902789224206!GO:0030518;steroid hormone receptor signaling pathway;0.00579687393614055!GO:0046467;membrane lipid biosynthetic process;0.00582399299577456!GO:0043021;ribonucleoprotein binding;0.00599227105564913!GO:0030127;COPII vesicle coat;0.00619803595200696!GO:0012507;ER to Golgi transport vesicle membrane;0.00619803595200696!GO:0006891;intra-Golgi vesicle-mediated transport;0.00621379036567308!GO:0031968;organelle outer membrane;0.00622731282169536!GO:0003729;mRNA binding;0.00633818160560764!GO:0040011;locomotion;0.00649947305432991!GO:0022402;cell cycle process;0.00666561234897247!GO:0003690;double-stranded DNA binding;0.00666561234897247!GO:0004300;enoyl-CoA hydratase activity;0.00669864366853288!GO:0004298;threonine endopeptidase activity;0.00681967173161779!GO:0051348;negative regulation of transferase activity;0.00681967173161779!GO:0046983;protein dimerization activity;0.00703754970715494!GO:0016787;hydrolase activity;0.00703853470014687!GO:0030659;cytoplasmic vesicle membrane;0.00709564146129467!GO:0016126;sterol biosynthetic process;0.00726600457850607!GO:0018196;peptidyl-asparagine modification;0.00729368474018932!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00729368474018932!GO:0006519;amino acid and derivative metabolic process;0.00732480974340408!GO:0043407;negative regulation of MAP kinase activity;0.00733748168050294!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.00752952770769943!GO:0033043;regulation of organelle organization and biogenesis;0.00752952770769943!GO:0005099;Ras GTPase activator activity;0.00755816817346938!GO:0008064;regulation of actin polymerization and/or depolymerization;0.00767254428763727!GO:0040012;regulation of locomotion;0.00782581245956161!GO:0000902;cell morphogenesis;0.00785419541075695!GO:0032989;cellular structure morphogenesis;0.00785419541075695!GO:0006695;cholesterol biosynthetic process;0.00790290854727662!GO:0031323;regulation of cellular metabolic process;0.00790290854727662!GO:0005975;carbohydrate metabolic process;0.0079606938140521!GO:0019867;outer membrane;0.00797830149546561!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.00804046076814594!GO:0009308;amine metabolic process;0.00804046076814594!GO:0016197;endosome transport;0.00811282783044212!GO:0045454;cell redox homeostasis;0.00819936294600268!GO:0005765;lysosomal membrane;0.00821064116008478!GO:0005048;signal sequence binding;0.00838135254033171!GO:0017166;vinculin binding;0.00861152822039071!GO:0030041;actin filament polymerization;0.00873362634444663!GO:0051252;regulation of RNA metabolic process;0.00888632168747711!GO:0031902;late endosome membrane;0.00892270029538876!GO:0009719;response to endogenous stimulus;0.00895035365067406!GO:0030658;transport vesicle membrane;0.0092339909442413!GO:0012506;vesicle membrane;0.00925681358189779!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.009547247961449!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.0096190443653875!GO:0015399;primary active transmembrane transporter activity;0.0096190443653875!GO:0009081;branched chain family amino acid metabolic process;0.00966786122031808!GO:0044433;cytoplasmic vesicle part;0.0101489608756621!GO:0016311;dephosphorylation;0.0101558963360922!GO:0005885;Arp2/3 protein complex;0.0105541363544529!GO:0032535;regulation of cellular component size;0.010563483574631!GO:0019904;protein domain specific binding;0.0106802126551483!GO:0048487;beta-tubulin binding;0.0109109387111836!GO:0045792;negative regulation of cell size;0.0109466044406186!GO:0030832;regulation of actin filament length;0.0114882592868066!GO:0046578;regulation of Ras protein signal transduction;0.0115736140254807!GO:0001944;vasculature development;0.0117199201423225!GO:0016301;kinase activity;0.0118020370814117!GO:0004680;casein kinase activity;0.0120905722252675!GO:0051087;chaperone binding;0.0121035430315465!GO:0000097;sulfur amino acid biosynthetic process;0.0122009447855748!GO:0001568;blood vessel development;0.012315918012517!GO:0005852;eukaryotic translation initiation factor 3 complex;0.012402727838405!GO:0004004;ATP-dependent RNA helicase activity;0.0124570555778704!GO:0006974;response to DNA damage stimulus;0.0129508755976296!GO:0044275;cellular carbohydrate catabolic process;0.0131171251795462!GO:0005762;mitochondrial large ribosomal subunit;0.0135585804790503!GO:0000315;organellar large ribosomal subunit;0.0135585804790503!GO:0006509;membrane protein ectodomain proteolysis;0.0136047496484565!GO:0033619;membrane protein proteolysis;0.0136047496484565!GO:0006672;ceramide metabolic process;0.0140065228461301!GO:0046483;heterocycle metabolic process;0.0141108512513777!GO:0006635;fatty acid beta-oxidation;0.0144644554962869!GO:0006790;sulfur metabolic process;0.0146611594411452!GO:0004364;glutathione transferase activity;0.0147451467446372!GO:0016859;cis-trans isomerase activity;0.0151937089361203!GO:0050681;androgen receptor binding;0.0152175563486801!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0153356456553967!GO:0006401;RNA catabolic process;0.0155159390469246!GO:0016903;oxidoreductase activity, acting on the aldehyde or oxo group of donors;0.0158401009675922!GO:0016363;nuclear matrix;0.0158401009675922!GO:0032956;regulation of actin cytoskeleton organization and biogenesis;0.0158980033545719!GO:0030308;negative regulation of cell growth;0.016044100054692!GO:0050811;GABA receptor binding;0.0162306253156322!GO:0051101;regulation of DNA binding;0.0162860616318767!GO:0046474;glycerophospholipid biosynthetic process;0.0168010126039727!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.0179918491460567!GO:0009066;aspartate family amino acid metabolic process;0.0180654350098383!GO:0043492;ATPase activity, coupled to movement of substances;0.0182702700668642!GO:0030132;clathrin coat of coated pit;0.0185793292778089!GO:0044420;extracellular matrix part;0.0194960620682582!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.0196149807913279!GO:0006007;glucose catabolic process;0.0196416875470962!GO:0007588;excretion;0.0196416875470962!GO:0005815;microtubule organizing center;0.019754818889155!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.019827621380492!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.0198973304089482!GO:0016584;nucleosome positioning;0.0201694953815332!GO:0033176;proton-transporting V-type ATPase complex;0.0204530380289829!GO:0016471;vacuolar proton-transporting V-type ATPase complex;0.0204530380289829!GO:0046519;sphingoid metabolic process;0.0209006384511707!GO:0008139;nuclear localization sequence binding;0.0211956772803783!GO:0030663;COPI coated vesicle membrane;0.0212886362497394!GO:0030126;COPI vesicle coat;0.0212886362497394!GO:0006644;phospholipid metabolic process;0.0213666200307875!GO:0019199;transmembrane receptor protein kinase activity;0.0215507664657449!GO:0004185;serine carboxypeptidase activity;0.0215507664657449!GO:0006839;mitochondrial transport;0.0215781076913337!GO:0030031;cell projection biogenesis;0.0216272929576942!GO:0051049;regulation of transport;0.0220507559828016!GO:0006555;methionine metabolic process;0.0221427346582514!GO:0005100;Rho GTPase activator activity;0.0222924597933572!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0223961977869085!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0231846243598242!GO:0006350;transcription;0.0232282269041431!GO:0006607;NLS-bearing substrate import into nucleus;0.0238491721103328!GO:0000059;protein import into nucleus, docking;0.0238491721103328!GO:0016408;C-acyltransferase activity;0.0239395787809575!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.024940399031096!GO:0009893;positive regulation of metabolic process;0.0253089144558058!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0253630650313607!GO:0030660;Golgi-associated vesicle membrane;0.0256266319553185!GO:0007569;cell aging;0.0256342918923161!GO:0032594;protein transport within lipid bilayer;0.025822000082401!GO:0032907;transforming growth factor-beta3 production;0.025822000082401!GO:0032596;protein transport into lipid raft;0.025822000082401!GO:0032910;regulation of transforming growth factor-beta3 production;0.025822000082401!GO:0032595;B cell receptor transport within lipid bilayer;0.025822000082401!GO:0033606;chemokine receptor transport within lipid bilayer;0.025822000082401!GO:0032600;chemokine receptor transport out of lipid raft;0.025822000082401!GO:0032599;protein transport out of lipid raft;0.025822000082401!GO:0032597;B cell receptor transport into lipid raft;0.025822000082401!GO:0032913;negative regulation of transforming growth factor-beta3 production;0.025822000082401!GO:0006810;transport;0.0258419438893756!GO:0007040;lysosome organization and biogenesis;0.0261789781250757!GO:0006984;ER-nuclear signaling pathway;0.0266133934555017!GO:0045045;secretory pathway;0.0269259180599871!GO:0043681;protein import into mitochondrion;0.0269280572217116!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0269285454465037!GO:0007179;transforming growth factor beta receptor signaling pathway;0.0271424944540266!GO:0006399;tRNA metabolic process;0.027160038234977!GO:0009165;nucleotide biosynthetic process;0.0272067660689785!GO:0030522;intracellular receptor-mediated signaling pathway;0.0277689144977258!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0278268385579573!GO:0043086;negative regulation of catalytic activity;0.0286394597736353!GO:0019395;fatty acid oxidation;0.028747244034848!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.0292535001986637!GO:0019902;phosphatase binding;0.0299871748340916!GO:0005581;collagen;0.0300676223495175!GO:0004721;phosphoprotein phosphatase activity;0.0301531249993252!GO:0044427;chromosomal part;0.0301531249993252!GO:0043087;regulation of GTPase activity;0.0307161119589204!GO:0048500;signal recognition particle;0.0313425872677474!GO:0051674;localization of cell;0.0313425872677474!GO:0006928;cell motility;0.0313425872677474!GO:0008147;structural constituent of bone;0.031356478178492!GO:0006611;protein export from nucleus;0.0314502447394846!GO:0008629;induction of apoptosis by intracellular signals;0.0315296019843717!GO:0006631;fatty acid metabolic process;0.0319903250414894!GO:0046164;alcohol catabolic process;0.0321976411448224!GO:0006693;prostaglandin metabolic process;0.0326798967620311!GO:0006692;prostanoid metabolic process;0.0326798967620311!GO:0005869;dynactin complex;0.0326798967620311!GO:0008097;5S rRNA binding;0.032700912604677!GO:0010468;regulation of gene expression;0.0327583209528168!GO:0046365;monosaccharide catabolic process;0.0330232004145359!GO:0003746;translation elongation factor activity;0.0338325927592541!GO:0008287;protein serine/threonine phosphatase complex;0.0338624016298426!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0339555840502235!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0339555840502235!GO:0031529;ruffle organization and biogenesis;0.0344881660026155!GO:0030384;phosphoinositide metabolic process;0.0344959453385515!GO:0000314;organellar small ribosomal subunit;0.0348561071638412!GO:0005763;mitochondrial small ribosomal subunit;0.0348561071638412!GO:0035035;histone acetyltransferase binding;0.0349403785880208!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0350525164313491!GO:0001725;stress fiber;0.0354096887257914!GO:0032432;actin filament bundle;0.0354096887257914!GO:0031901;early endosome membrane;0.0364158288358436!GO:0007033;vacuole organization and biogenesis;0.0367821764721643!GO:0005813;centrosome;0.0380329002728646!GO:0051017;actin filament bundle formation;0.0380329002728646!GO:0030320;cellular monovalent inorganic anion homeostasis;0.0380329002728646!GO:0055083;monovalent inorganic anion homeostasis;0.0380329002728646!GO:0055064;chloride ion homeostasis;0.0380329002728646!GO:0030644;cellular chloride ion homeostasis;0.0380329002728646!GO:0006892;post-Golgi vesicle-mediated transport;0.038044445153518!GO:0006338;chromatin remodeling;0.0390411486829653!GO:0051235;maintenance of localization;0.0411121508108567!GO:0005637;nuclear inner membrane;0.041329896831068!GO:0033130;acetylcholine receptor binding;0.0413475674143524!GO:0019320;hexose catabolic process;0.0415117937737635!GO:0005694;chromosome;0.0416228168930668!GO:0051539;4 iron, 4 sulfur cluster binding;0.0419877802392709!GO:0001516;prostaglandin biosynthetic process;0.042040316705999!GO:0046457;prostanoid biosynthetic process;0.042040316705999!GO:0015631;tubulin binding;0.0422861489999822!GO:0030137;COPI-coated vesicle;0.0424700969910299!GO:0008652;amino acid biosynthetic process;0.0426205927467347!GO:0004195;renin activity;0.0433826429980276!GO:0000118;histone deacetylase complex;0.0434570570167443!GO:0005684;U2-dependent spliceosome;0.0434685910099256!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.0434685910099256!GO:0045446;endothelial cell differentiation;0.0439481893365022!GO:0051336;regulation of hydrolase activity;0.0441221058543247!GO:0000786;nucleosome;0.0446468851466818!GO:0022415;viral reproductive process;0.0446673492765631!GO:0006414;translational elongation;0.0449572583721497!GO:0009083;branched chain family amino acid catabolic process;0.0450292074057438!GO:0009956;radial pattern formation;0.045227877587084!GO:0007015;actin filament organization;0.0453648818193054!GO:0001525;angiogenesis;0.045497669153306!GO:0006364;rRNA processing;0.0456210174985408!GO:0030145;manganese ion binding;0.0458317262196266!GO:0005832;chaperonin-containing T-complex;0.0458317262196266!GO:0046822;regulation of nucleocytoplasmic transport;0.0465471801956227!GO:0030139;endocytic vesicle;0.0469539392951954!GO:0031272;regulation of pseudopodium formation;0.0475383165033897!GO:0031269;pseudopodium formation;0.0475383165033897!GO:0031344;regulation of cell projection organization and biogenesis;0.0475383165033897!GO:0031268;pseudopodium organization and biogenesis;0.0475383165033897!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0475383165033897!GO:0031274;positive regulation of pseudopodium formation;0.0475383165033897!GO:0031628;opioid receptor binding;0.0480120057300075!GO:0031852;mu-type opioid receptor binding;0.0480120057300075!GO:0051234;establishment of localization;0.0480178344046105!GO:0006260;DNA replication;0.0485744846213911!GO:0051604;protein maturation;0.0492083544369419!GO:0006665;sphingolipid metabolic process;0.0492347141366445!GO:0008354;germ cell migration;0.0495361124352566!GO:0031072;heat shock protein binding;0.0495946134529893 | |||
|sample_id=10045 | |sample_id=10045 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 100: | ||
|sample_tissue=kidney | |sample_tissue=kidney | ||
|top_motifs=HNF1A:5.10119208143;SP1:3.01633342208;HNF4A_NR2F1,2:2.77052937934;MAZ:2.74338171259;TFCP2:2.26006426565;NKX2-3_NKX2-5:2.2352527381;PATZ1:2.17745681963;ADNP_IRX_SIX_ZHX:2.11186646255;MED-1{core}:2.06347690795;MZF1:2.04041667879;XCPE1{core}:1.98876644077;HIC1:1.95876607594;TFAP2{A,C}:1.92969345467;EP300:1.89872591837;PBX1:1.83264890166;HOX{A6,A7,B6,B7}:1.81613252205;TBP:1.79235762797;PAX5:1.73501918144;FOX{D1,D2}:1.68051892138;GTF2I:1.64744895721;TFAP2B:1.6094418305;RREB1:1.60085402349;FOXQ1:1.58441098776;RXRA_VDR{dimer}:1.52888632725;HBP1_HMGB_SSRP1_UBTF:1.50650435666;SNAI1..3:1.48022078381;VSX1,2:1.46510922243;SOX5:1.41584294711;GFI1:1.38578160153;EGR1..3:1.34335846127;TLX1..3_NFIC{dimer}:1.28690185623;SREBF1,2:1.28570704777;GTF2A1,2:1.25095750689;TEAD1:1.21688465523;ZEB1:1.21134361916;RBPJ:1.21004580934;PAX6:1.20021417208;STAT1,3:1.18855868251;T:1.17584069808;MTF1:1.14707312041;NKX3-2:1.1256283234;SPZ1:1.08615536545;GFI1B:1.06537211922;MTE{core}:1.06287674804;ZFP161:1.05017946383;SMAD1..7,9:1.04802874941;ESR1:1.02571689319;ESRRA:1.02323078333;PRRX1,2:1.00932917444;NANOG{mouse}:0.964746846694;IKZF1:0.949065922805;NFATC1..3:0.904759588003;PRDM1:0.889322582922;TGIF1:0.887131406638;NR5A1,2:0.861268158217;POU2F1..3:0.84530119505;FOX{I1,J2}:0.829874316567;ATF2:0.811702665688;SOX2:0.751512869225;ZIC1..3:0.746728625562;GCM1,2:0.744271627301;SOX{8,9,10}:0.74164394033;LMO2:0.735689873657;MYBL2:0.719404755182;BREu{core}:0.719045298012;MYOD1:0.684953680821;RFX1:0.683067413119;EBF1:0.673100957341;RXR{A,B,G}:0.668860364173;HIF1A:0.64763795616;GZF1:0.638363173382;FOXO1,3,4:0.608603174803;AR:0.599060217115;MYFfamily:0.595474434347;LEF1_TCF7_TCF7L1,2:0.541205227002;NFY{A,B,C}:0.506477898141;HAND1,2:0.478611514629;POU6F1:0.473398508538;NR6A1:0.465561566774;NKX2-1,4:0.443934062632;SRF:0.438329353978;ZNF143:0.426036727665;ZNF423:0.421117203935;DBP:0.414655871405;TLX2:0.407855973347;ZNF148:0.395025242813;JUN:0.350918980986;BPTF:0.350563009671;FOXD3:0.341769779254;IRF7:0.324172994361;PAX1,9:0.322079755805;MEF2{A,B,C,D}:0.304933928125;GATA6:0.290186710927;NHLH1,2:0.26254814669;ATF4:0.222073890893;ZNF238:0.216097480891;FOXN1:0.21336003464;TFAP4:0.204364263619;CUX2:0.193690849739;GLI1..3:0.162936494123;NRF1:0.154406590811;bHLH_family:0.14775571582;ALX1:0.144696254605;LHX3,4:0.14315390529;ETS1,2:0.125839819769;POU5F1:0.123921796496;PDX1:0.118834970535;FOXM1:0.102122723661;TBX4,5:0.0641346952731;KLF4:0.0297126064201;NANOG:0.0219152310076;REST:-0.0275130232703;ATF6:-0.0548523399846;STAT2,4,6:-0.056228271023;XBP1:-0.0909282671231;ZBTB6:-0.0966293939722;SPIB:-0.129625103499;PAX2:-0.132072678297;RFX2..5_RFXANK_RFXAP:-0.15632340881;CREB1:-0.167348483386;TP53:-0.167885786197;PITX1..3:-0.174875733056;MAFB:-0.175262499121;SPI1:-0.200243651615;ONECUT1,2:-0.20217687935;SOX17:-0.22282909647;RORA:-0.224737151071;EN1,2:-0.228016299981;FOXL1:-0.231064757803;CDC5L:-0.240630719932;TOPORS:-0.24171607191;IRF1,2:-0.273162245486;POU3F1..4:-0.283509667356;NFKB1_REL_RELA:-0.291715308023;ZNF384:-0.310529156865;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.313547905103;HLF:-0.332006614814;FOXP3:-0.33795116085;PPARG:-0.375146947099;HSF1,2:-0.389055312594;TAL1_TCF{3,4,12}:-0.396151863819;ELF1,2,4:-0.396201456865;HOX{A5,B5}:-0.397467683795;NFE2:-0.410638693698;ATF5_CREB3:-0.430415283375;E2F1..5:-0.439634398945;NFIX:-0.462754692922;NFE2L2:-0.474985931945;TFDP1:-0.489532234322;FOXP1:-0.495449826937;HMX1:-0.497724658408;IKZF2:-0.516128237684;FOXA2:-0.532438847285;STAT5{A,B}:-0.573176842354;HOXA9_MEIS1:-0.59363052723;BACH2:-0.616793388243;CEBPA,B_DDIT3:-0.626777705445;NR3C1:-0.640203654633;ELK1,4_GABP{A,B1}:-0.668536631327;FOS_FOS{B,L1}_JUN{B,D}:-0.671807462968;AHR_ARNT_ARNT2:-0.674277191977;FOSL2:-0.683283045415;OCT4_SOX2{dimer}:-0.712916757891;YY1:-0.757209915374;RUNX1..3:-0.791573506278;NFIL3:-0.802208294813;FOX{F1,F2,J1}:-0.80699317205;NR1H4:-0.816809216728;NKX6-1,2:-0.846442899695;PAX8:-0.883997080522;ARID5B:-0.960284178742;ALX4:-1.02688685397;HES1:-1.03483776648;DMAP1_NCOR{1,2}_SMARC:-1.05758966615;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.0693214433;POU1F1:-1.10338330477;UFEwm:-1.12490558516;PAX3,7:-1.14388153911;GATA4:-1.16361267248;NKX3-1:-1.23239850623;CRX:-1.24766983545;MYB:-1.25538092057;HMGA1,2:-1.30632012177;AIRE:-1.40450764953;HOX{A4,D4}:-1.47085897831;TEF:-1.52826349902;ZBTB16:-1.9044410152;PAX4:-1.93886941399;EVI1:-1.98612799334;CDX1,2,4:-2.04130461455;NFE2L1:-2.14821155424;NKX2-2,8:-2.59260135559 | |top_motifs=HNF1A:5.10119208143;SP1:3.01633342208;HNF4A_NR2F1,2:2.77052937934;MAZ:2.74338171259;TFCP2:2.26006426565;NKX2-3_NKX2-5:2.2352527381;PATZ1:2.17745681963;ADNP_IRX_SIX_ZHX:2.11186646255;MED-1{core}:2.06347690795;MZF1:2.04041667879;XCPE1{core}:1.98876644077;HIC1:1.95876607594;TFAP2{A,C}:1.92969345467;EP300:1.89872591837;PBX1:1.83264890166;HOX{A6,A7,B6,B7}:1.81613252205;TBP:1.79235762797;PAX5:1.73501918144;FOX{D1,D2}:1.68051892138;GTF2I:1.64744895721;TFAP2B:1.6094418305;RREB1:1.60085402349;FOXQ1:1.58441098776;RXRA_VDR{dimer}:1.52888632725;HBP1_HMGB_SSRP1_UBTF:1.50650435666;SNAI1..3:1.48022078381;VSX1,2:1.46510922243;SOX5:1.41584294711;GFI1:1.38578160153;EGR1..3:1.34335846127;TLX1..3_NFIC{dimer}:1.28690185623;SREBF1,2:1.28570704777;GTF2A1,2:1.25095750689;TEAD1:1.21688465523;ZEB1:1.21134361916;RBPJ:1.21004580934;PAX6:1.20021417208;STAT1,3:1.18855868251;T:1.17584069808;MTF1:1.14707312041;NKX3-2:1.1256283234;SPZ1:1.08615536545;GFI1B:1.06537211922;MTE{core}:1.06287674804;ZFP161:1.05017946383;SMAD1..7,9:1.04802874941;ESR1:1.02571689319;ESRRA:1.02323078333;PRRX1,2:1.00932917444;NANOG{mouse}:0.964746846694;IKZF1:0.949065922805;NFATC1..3:0.904759588003;PRDM1:0.889322582922;TGIF1:0.887131406638;NR5A1,2:0.861268158217;POU2F1..3:0.84530119505;FOX{I1,J2}:0.829874316567;ATF2:0.811702665688;SOX2:0.751512869225;ZIC1..3:0.746728625562;GCM1,2:0.744271627301;SOX{8,9,10}:0.74164394033;LMO2:0.735689873657;MYBL2:0.719404755182;BREu{core}:0.719045298012;MYOD1:0.684953680821;RFX1:0.683067413119;EBF1:0.673100957341;RXR{A,B,G}:0.668860364173;HIF1A:0.64763795616;GZF1:0.638363173382;FOXO1,3,4:0.608603174803;AR:0.599060217115;MYFfamily:0.595474434347;LEF1_TCF7_TCF7L1,2:0.541205227002;NFY{A,B,C}:0.506477898141;HAND1,2:0.478611514629;POU6F1:0.473398508538;NR6A1:0.465561566774;NKX2-1,4:0.443934062632;SRF:0.438329353978;ZNF143:0.426036727665;ZNF423:0.421117203935;DBP:0.414655871405;TLX2:0.407855973347;ZNF148:0.395025242813;JUN:0.350918980986;BPTF:0.350563009671;FOXD3:0.341769779254;IRF7:0.324172994361;PAX1,9:0.322079755805;MEF2{A,B,C,D}:0.304933928125;GATA6:0.290186710927;NHLH1,2:0.26254814669;ATF4:0.222073890893;ZNF238:0.216097480891;FOXN1:0.21336003464;TFAP4:0.204364263619;CUX2:0.193690849739;GLI1..3:0.162936494123;NRF1:0.154406590811;bHLH_family:0.14775571582;ALX1:0.144696254605;LHX3,4:0.14315390529;ETS1,2:0.125839819769;POU5F1:0.123921796496;PDX1:0.118834970535;FOXM1:0.102122723661;TBX4,5:0.0641346952731;KLF4:0.0297126064201;NANOG:0.0219152310076;REST:-0.0275130232703;ATF6:-0.0548523399846;STAT2,4,6:-0.056228271023;XBP1:-0.0909282671231;ZBTB6:-0.0966293939722;SPIB:-0.129625103499;PAX2:-0.132072678297;RFX2..5_RFXANK_RFXAP:-0.15632340881;CREB1:-0.167348483386;TP53:-0.167885786197;PITX1..3:-0.174875733056;MAFB:-0.175262499121;SPI1:-0.200243651615;ONECUT1,2:-0.20217687935;SOX17:-0.22282909647;RORA:-0.224737151071;EN1,2:-0.228016299981;FOXL1:-0.231064757803;CDC5L:-0.240630719932;TOPORS:-0.24171607191;IRF1,2:-0.273162245486;POU3F1..4:-0.283509667356;NFKB1_REL_RELA:-0.291715308023;ZNF384:-0.310529156865;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.313547905103;HLF:-0.332006614814;FOXP3:-0.33795116085;PPARG:-0.375146947099;HSF1,2:-0.389055312594;TAL1_TCF{3,4,12}:-0.396151863819;ELF1,2,4:-0.396201456865;HOX{A5,B5}:-0.397467683795;NFE2:-0.410638693698;ATF5_CREB3:-0.430415283375;E2F1..5:-0.439634398945;NFIX:-0.462754692922;NFE2L2:-0.474985931945;TFDP1:-0.489532234322;FOXP1:-0.495449826937;HMX1:-0.497724658408;IKZF2:-0.516128237684;FOXA2:-0.532438847285;STAT5{A,B}:-0.573176842354;HOXA9_MEIS1:-0.59363052723;BACH2:-0.616793388243;CEBPA,B_DDIT3:-0.626777705445;NR3C1:-0.640203654633;ELK1,4_GABP{A,B1}:-0.668536631327;FOS_FOS{B,L1}_JUN{B,D}:-0.671807462968;AHR_ARNT_ARNT2:-0.674277191977;FOSL2:-0.683283045415;OCT4_SOX2{dimer}:-0.712916757891;YY1:-0.757209915374;RUNX1..3:-0.791573506278;NFIL3:-0.802208294813;FOX{F1,F2,J1}:-0.80699317205;NR1H4:-0.816809216728;NKX6-1,2:-0.846442899695;PAX8:-0.883997080522;ARID5B:-0.960284178742;ALX4:-1.02688685397;HES1:-1.03483776648;DMAP1_NCOR{1,2}_SMARC:-1.05758966615;RXR{A,B,G}_{NR1H2,PPAR}dimers:-1.0693214433;POU1F1:-1.10338330477;UFEwm:-1.12490558516;PAX3,7:-1.14388153911;GATA4:-1.16361267248;NKX3-1:-1.23239850623;CRX:-1.24766983545;MYB:-1.25538092057;HMGA1,2:-1.30632012177;AIRE:-1.40450764953;HOX{A4,D4}:-1.47085897831;TEF:-1.52826349902;ZBTB16:-1.9044410152;PAX4:-1.93886941399;EVI1:-1.98612799334;CDX1,2,4:-2.04130461455;NFE2L1:-2.14821155424;NKX2-2,8:-2.59260135559 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10045-101F9;search_select_hide=table117:FF:10045-101F9 | |||
}} | }} | ||
Latest revision as of 12:17, 3 June 2020
| Name: | kidney, fetal, pool1 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs10652 |
| Sample type: | tissues |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs10652
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs10652
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.0087 |
| 10 | 10 | 0.0129 |
| 100 | 100 | 0.321 |
| 101 | 101 | 0.446 |
| 102 | 102 | 0.682 |
| 103 | 103 | 0.0606 |
| 104 | 104 | 0.747 |
| 105 | 105 | 0.738 |
| 106 | 106 | 0.212 |
| 107 | 107 | 0.624 |
| 108 | 108 | 0.517 |
| 109 | 109 | 0.0164 |
| 11 | 11 | 0.035 |
| 110 | 110 | 0.0835 |
| 111 | 111 | 7.41935e-4 |
| 112 | 112 | 0.147 |
| 113 | 113 | 0.583 |
| 114 | 114 | 3.6964e-4 |
| 115 | 115 | 0.706 |
| 116 | 116 | 0.303 |
| 117 | 117 | 0.00817 |
| 118 | 118 | 0.154 |
| 119 | 119 | 0.101 |
| 12 | 12 | 0.791 |
| 120 | 120 | 0.162 |
| 121 | 121 | 0.924 |
| 122 | 122 | 0.487 |
| 123 | 123 | 0.00673 |
| 124 | 124 | 0.637 |
| 125 | 125 | 0.00375 |
| 126 | 126 | 0.875 |
| 127 | 127 | 0.111 |
| 128 | 128 | 0.249 |
| 129 | 129 | 0.901 |
| 13 | 13 | 0.135 |
| 130 | 130 | 0.146 |
| 131 | 131 | 0.722 |
| 132 | 132 | 0.743 |
| 133 | 133 | 0.899 |
| 134 | 134 | 0.77 |
| 135 | 135 | 0.89 |
| 136 | 136 | 0.945 |
| 137 | 137 | 0.269 |
| 138 | 138 | 0.241 |
| 139 | 139 | 0.0218 |
| 14 | 14 | 0.887 |
| 140 | 140 | 0.181 |
| 141 | 141 | 0.0922 |
| 142 | 142 | 0.451 |
| 143 | 143 | 0.00181 |
| 144 | 144 | 0.495 |
| 145 | 145 | 0.485 |
| 146 | 146 | 0.612 |
| 147 | 147 | 0.874 |
| 148 | 148 | 0.00887 |
| 149 | 149 | 0.468 |
| 15 | 15 | 0.0514 |
| 150 | 150 | 0.404 |
| 151 | 151 | 0.438 |
| 152 | 152 | 0.945 |
| 153 | 153 | 0.95 |
| 154 | 154 | 0.378 |
| 155 | 155 | 0.28 |
| 156 | 156 | 0.769 |
| 157 | 157 | 0.734 |
| 158 | 158 | 0.435 |
| 159 | 159 | 0.369 |
| 16 | 16 | 0.137 |
| 160 | 160 | 0.365 |
| 161 | 161 | 0.283 |
| 162 | 162 | 0.691 |
| 163 | 163 | 0.773 |
| 164 | 164 | 0.0454 |
| 165 | 165 | 0.45 |
| 166 | 166 | 0.842 |
| 167 | 167 | 0.0142 |
| 168 | 168 | 0.93 |
| 169 | 169 | 0.0536 |
| 17 | 17 | 0.23 |
| 18 | 18 | 0.0245 |
| 19 | 19 | 0.697 |
| 2 | 2 | 0.603 |
| 20 | 20 | 0.362 |
| 21 | 21 | 0.159 |
| 22 | 22 | 0.707 |
| 23 | 23 | 0.585 |
| 24 | 24 | 0.73 |
| 25 | 25 | 0.323 |
| 26 | 26 | 0.0172 |
| 27 | 27 | 0.725 |
| 28 | 28 | 0.768 |
| 29 | 29 | 0.0173 |
| 3 | 3 | 0.0501 |
| 30 | 30 | 0.112 |
| 31 | 31 | 0.874 |
| 32 | 32 | 0.122 |
| 33 | 33 | 0.318 |
| 34 | 34 | 0.463 |
| 35 | 35 | 0.0968 |
| 36 | 36 | 0.00828 |
| 37 | 37 | 0.0532 |
| 38 | 38 | 0.539 |
| 39 | 39 | 0.834 |
| 4 | 4 | 0.702 |
| 40 | 40 | 0.258 |
| 41 | 41 | 0.185 |
| 42 | 42 | 0.13 |
| 43 | 43 | 0.115 |
| 44 | 44 | 0.245 |
| 45 | 45 | 0.515 |
| 46 | 46 | 0.0262 |
| 47 | 47 | 0.0567 |
| 48 | 48 | 0.136 |
| 49 | 49 | 0.0676 |
| 5 | 5 | 0.21 |
| 50 | 50 | 0.835 |
| 51 | 51 | 0.543 |
| 52 | 52 | 0.618 |
| 53 | 53 | 0.577 |
| 54 | 54 | 0.684 |
| 55 | 55 | 0.149 |
| 56 | 56 | 0.73 |
| 57 | 57 | 0.182 |
| 58 | 58 | 0.453 |
| 59 | 59 | 0.457 |
| 6 | 6 | 0.348 |
| 60 | 60 | 0.424 |
| 61 | 61 | 0.273 |
| 62 | 62 | 0.132 |
| 63 | 63 | 0.255 |
| 64 | 64 | 0.147 |
| 65 | 65 | 0.454 |
| 66 | 66 | 0.753 |
| 67 | 67 | 0.21 |
| 68 | 68 | 0.431 |
| 69 | 69 | 0.57 |
| 7 | 7 | 0.435 |
| 70 | 70 | 0.00851 |
| 71 | 71 | 0.0146 |
| 72 | 72 | 0.581 |
| 73 | 73 | 0.093 |
| 74 | 74 | 0.202 |
| 75 | 75 | 0.00683 |
| 76 | 76 | 0.0417 |
| 77 | 77 | 0.859 |
| 78 | 78 | 0.243 |
| 79 | 79 | 0.0895 |
| 8 | 8 | 0.0451 |
| 80 | 80 | 0.578 |
| 81 | 81 | 0.117 |
| 82 | 82 | 0.188 |
| 83 | 83 | 0.583 |
| 84 | 84 | 0.563 |
| 85 | 85 | 0.208 |
| 86 | 86 | 0.21 |
| 87 | 87 | 0.185 |
| 88 | 88 | 0.941 |
| 89 | 89 | 0.223 |
| 9 | 9 | 0.944 |
| 90 | 90 | 0.042 |
| 91 | 91 | 0.409 |
| 92 | 92 | 0.246 |
| 93 | 93 | 0.156 |
| 94 | 94 | 0.0208 |
| 95 | 95 | 0.0767 |
| 96 | 96 | 0.12 |
| 97 | 97 | 0.742 |
| 98 | 98 | 0.0962 |
| 99 | 99 | 0.559 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs10652
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0010045 human kidney - fetal sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0002113 (kidney)
0002100 (trunk)
0000479 (tissue)
0000062 (organ)
0000475 (organism subdivision)
0006554 (urinary system structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0003103 (compound organ)
0009569 (subdivision of trunk)
0000489 (cavitated compound organ)
0005177 (trunk region element)
0005172 (abdomen element)
0005173 (abdominal segment element)
0011143 (upper urinary tract)
0001008 (renal system)
0002417 (abdominal segment of trunk)
0000916 (abdomen)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000999 (fetal tissue sample)
0000004 (tissue sample)
0010045 (human kidney - fetal sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
UBERON:0003104 (mesenchyme)
UBERON:0003918 (kidney mesenchyme)
UBERON:0007687 (kidney field)
