FFCP PHASE1:Mm9::chr11:72248736..72248804,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71522 | |EntrezGene=71522 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=207 | |||
|TSSclassifier=NA | |||
|UniProt=Q6PDE7,Q7TNR0 | |UniProt=Q6PDE7,Q7TNR0 | ||
|association_with_transcript=-223bp_to_ENSMUST00000076443,NM_027819,uc007jyw.1,uc007jyx.1_5end | |association_with_transcript=-223bp_to_ENSMUST00000076443,NM_027819,uc007jyw.1,uc007jyx.1_5end | ||
|cluster_id=chr11:72248736..72248804,+ | |||
|description=CAGE_peak_1_at_Ggt6_5end | |description=CAGE_peak_1_at_Ggt6_5end | ||
|id=chr11:72248736..72248804,+ | |id=chr11:72248736..72248804,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.28e-08!25;CL:0000223!1.31e-07!20;CL:0002563!1.57e-07!9;CL:0002251!1.57e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.13e-11,25;CL:0002563,7.30e-11,9;CL:0002251,7.30e-11,9;CL:0000223,8.63e-10,20;CL:0000239,3.03e-08,6;CL:0000677,3.03e-08,6;CL:0000584,3.03e-08,6;CL:0000075,7.26e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!1.29e-19!128;UBERON:0001555!1.29e-19!128;UBERON:0007026!1.29e-19!128;UBERON:0004119!1.89e-19!130;UBERON:0000925!1.89e-19!130;UBERON:0006595!1.89e-19!130;UBERON:0004921!3.06e-18!126;UBERON:0004185!3.06e-18!126;UBERON:0000160!2.46e-16!43;UBERON:0005409!8.31e-15!59;UBERON:0000344!6.34e-12!15;UBERON:0001242!2.25e-10!13;UBERON:0000060!2.25e-10!13;UBERON:0001262!2.25e-10!13;UBERON:0004786!2.25e-10!13;UBERON:0009854!1.53e-07!23;UBERON:0009856!1.53e-07!23;UBERON:0003350!1.57e-07!9;UBERON:0004808!1.57e-07!9;UBERON:0001277!1.57e-07!9;UBERON:0002107!4.35e-07!22;UBERON:0007499!4.35e-07!22;UBERON:0006925!4.35e-07!22;UBERON:0009497!4.35e-07!22;UBERON:0000015!4.35e-07!22;UBERON:0002423!4.35e-07!22;UBERON:0006235!4.35e-07!22;UBERON:0008835!4.35e-07!22;UBERON:0003894!4.35e-07!22;UBERON:0004161!4.35e-07!22;UBERON:0008836!4.35e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.03e-28,31;UBERON:0005409,9.19e-20,47;UBERON:0000344,1.07e-17,15;UBERON:0001242,2.78e-15,13;UBERON:0001262,2.78e-15,13;UBERON:0004786,2.78e-15,13;UBERON:0001007,3.74e-15,116;UBERON:0001555,3.74e-15,116;UBERON:0007026,3.74e-15,116;UBERON:0004119,1.26e-14,118;UBERON:0000925,1.26e-14,118;UBERON:0006595,1.26e-14,118;UBERON:0004921,1.32e-13,114;UBERON:0003350,7.30e-11,9;UBERON:0004808,7.30e-11,9;UBERON:0001277,7.30e-11,9;UBERON:0004923,3.79e-09,24;UBERON:0000485,2.05e-08,11;UBERON:0009854,3.47e-08,23;UBERON:0009856,3.47e-08,23;UBERON:0002107,1.53e-07,22;UBERON:0007499,1.53e-07,22;UBERON:0006925,1.53e-07,22;UBERON:0009497,1.53e-07,22;UBERON:0000015,1.53e-07,22;UBERON:0002423,1.53e-07,22;UBERON:0006235,1.53e-07,22;UBERON:0008835,1.53e-07,22;UBERON:0003894,1.53e-07,22;UBERON:0004161,1.53e-07,22;UBERON:0008836,1.53e-07,22 | |||
|phase1_expression=0,27.2200817958702,16.8349718574128,25.4069937497737,24.0429950374247,16.9558064631009,18.221785966451,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97651515528744,0,0,27.1987118748791,23.8585652309857,21.2465826722557,15.5074318617267,20.9007095705312,26.6032787238923,17.3900789534352,14.6342137032501,0,0,0,10.6875099307972,11.6364251750945,11.8418226632174,0,0,0,0,0,0,0,0,0.367093504323363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6087803983151,12.9063581547208,4.75979933595425,26.445456390253,51.3323369783659,33.1539896452028,6.46044332606059,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,7.87868770061514,0.776813650941515,0.148442139064825,0,0.608930956624282,0.230615497256059,0,0.587943535678524,0.628332956648377,0.988779870937496,0,0,0,0,0,3.72783522436244,0,0,19.6701932510615,0,0,0,0,0,0,0,0,0,0,1.12023300235348,0.373220911830279,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0.189106080167819,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0,0,22.7988960258821,20.89159476642,0,0.928946687441754,6.05677068213839,9.88249270654378,11.5636582799333,13.1255682017666,17.5575752771469,13.1759163779209,8.29406189040889,7.36138946552258,6.43381487493096,11.6846523125049,14.2651112917298,13.541606581297,0.189667900953082,0.685491075658373,0,2.24016460629846,3.29719228184964,2.87556861550306,4.7427402843193,11.2183712464498,16.7988638790271,12.8333050478673,37.0565783858936,0,0,0.224862112384854,0.202860121388503,0.241177159752417,0.763877555344259,2.30156909960649,1.78348749452539,1.92192989231657,0,0.744281895337007,2.18426371180192,6.56705082662491,22.6040741037609,29.9114983245288,2.58654466233247,0,0,0,0,0.335012514883631,1.19021820443007,0.780534591431195,0.945810864637146,0.221464689648775,0.159454768657487,0.327726629431476,0.345369963731791,1.44649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0.35613120733451,0,1.97964147567043,0,0.242780636154981,0.302323556964751,0.565815239267694,0.885905678642318,0.614870295887855,1.03371317267288,0,1.42598951353889,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0.704015124191131,0,0,2.96795255294664,0.484393280087717,0.663442174209714,0.716234064018819,1.14898629821543,11.0762717919343,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.406638934253697,1.18805874903981,0.836353184057875,2.62035076495413,1.07891477107857,0.661227645802687,0.523511883968059,6.73997861117323,0.621339313086926,0,0,0,0,0,0.168956125490778,0.234714477291508,0,0,0,0,0.316011120628178,0.202725215290164,0,0.129920822977795,0.358053391334963,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0.228620419965,0,0.194915761479505,0.192423683280659,0.116876902181569,0.906921534460845,0.221985953374065,0.0897138566094757,0,0.19318959403219,1.12609485270709,1.09890974560359,1.50057865355346,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.486213434136588,0,0.367687016900028,0.888986911206461,1.03017528619447,0.962757628775446,0.758091635291392,1.52087579934144,0.754505365544305,0.655490552289177,1.02440243847791,0.918967503289812,0,1.0429589335037,0.77163688185482,0.824171801606613,1.47198920134397,1.37147700954166,1.59728225543404,0.715308569841963,1.16277133305863,0.658765662907314,1.18460451048347,1.09756783723664,0.263069711437843,1.35804113845862,1.68342681497322,0.949080144993393,0.788035859004508,0.818462086339379,0.464810523557898,0.578719832943424,0,1.16965804222704,2.36358159453128,0,0.220591419119515,0 | |phase1_expression=0,27.2200817958702,16.8349718574128,25.4069937497737,24.0429950374247,16.9558064631009,18.221785966451,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97651515528744,0,0,27.1987118748791,23.8585652309857,21.2465826722557,15.5074318617267,20.9007095705312,26.6032787238923,17.3900789534352,14.6342137032501,0,0,0,10.6875099307972,11.6364251750945,11.8418226632174,0,0,0,0,0,0,0,0,0.367093504323363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6087803983151,12.9063581547208,4.75979933595425,26.445456390253,51.3323369783659,33.1539896452028,6.46044332606059,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,7.87868770061514,0.776813650941515,0.148442139064825,0,0.608930956624282,0.230615497256059,0,0.587943535678524,0.628332956648377,0.988779870937496,0,0,0,0,0,3.72783522436244,0,0,19.6701932510615,0,0,0,0,0,0,0,0,0,0,1.12023300235348,0.373220911830279,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0.189106080167819,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0,0,22.7988960258821,20.89159476642,0,0.928946687441754,6.05677068213839,9.88249270654378,11.5636582799333,13.1255682017666,17.5575752771469,13.1759163779209,8.29406189040889,7.36138946552258,6.43381487493096,11.6846523125049,14.2651112917298,13.541606581297,0.189667900953082,0.685491075658373,0,2.24016460629846,3.29719228184964,2.87556861550306,4.7427402843193,11.2183712464498,16.7988638790271,12.8333050478673,37.0565783858936,0,0,0.224862112384854,0.202860121388503,0.241177159752417,0.763877555344259,2.30156909960649,1.78348749452539,1.92192989231657,0,0.744281895337007,2.18426371180192,6.56705082662491,22.6040741037609,29.9114983245288,2.58654466233247,0,0,0,0,0.335012514883631,1.19021820443007,0.780534591431195,0.945810864637146,0.221464689648775,0.159454768657487,0.327726629431476,0.345369963731791,1.44649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0.35613120733451,0,1.97964147567043,0,0.242780636154981,0.302323556964751,0.565815239267694,0.885905678642318,0.614870295887855,1.03371317267288,0,1.42598951353889,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0.704015124191131,0,0,2.96795255294664,0.484393280087717,0.663442174209714,0.716234064018819,1.14898629821543,11.0762717919343,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0.158167996790568,0.406638934253697,1.18805874903981,0.836353184057875,2.62035076495413,1.07891477107857,0.661227645802687,0.523511883968059,6.73997861117323,0.621339313086926,0,0,0,0,0,0.168956125490778,0.234714477291508,0,0,0,0,0.316011120628178,0.202725215290164,0,0.129920822977795,0.358053391334963,0.198681354781265,0.120195449519969,0.147689527174577,0.201932899896295,0.228620419965,0,0.194915761479505,0.192423683280659,0.116876902181569,0.906921534460845,0.221985953374065,0.0897138566094757,0,0.19318959403219,1.12609485270709,1.09890974560359,1.50057865355346,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.486213434136588,0,0.367687016900028,0.888986911206461,1.03017528619447,0.962757628775446,0.758091635291392,1.52087579934144,0.754505365544305,0.655490552289177,1.02440243847791,0.918967503289812,0,1.0429589335037,0.77163688185482,0.824171801606613,1.47198920134397,1.37147700954166,1.59728225543404,0.715308569841963,1.16277133305863,0.658765662907314,1.18460451048347,1.09756783723664,0.263069711437843,1.35804113845862,1.68342681497322,0.949080144993393,0.788035859004508,0.818462086339379,0.464810523557898,0.578719832943424,0,1.16965804222704,2.36358159453128,0,0.220591419119515,0 | ||
|short_description=p1@Ggt6 | |short_description=p1@Ggt6 | ||
}} | }} |
Latest revision as of 15:32, 25 September 2015
Short description: | p1@Ggt6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ggt6_5end |
Coexpression cluster: | MCL_coexpression_mm9:207 |
Association with transcript: | -223bp_to_ENSMUST00000076443, NM_027819, uc007jyw.1, uc007jyx.1_5end |
EntrezGene: | Ggt6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.13e-11 | 25 |
intestinal epithelial cell | 7.30e-11 | 9 |
epithelial cell of alimentary canal | 7.30e-11 | 9 |
endodermal cell | 8.63e-10 | 20 |
brush border epithelial cell | 3.03e-08 | 6 |
gut absorptive cell | 3.03e-08 | 6 |
enterocyte | 3.03e-08 | 6 |
columnar/cuboidal epithelial cell | 7.26e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.03e-28 | 31 |
gastrointestinal system | 9.19e-20 | 47 |
mucosa | 1.07e-17 | 15 |
intestinal mucosa | 2.78e-15 | 13 |
wall of intestine | 2.78e-15 | 13 |
gastrointestinal system mucosa | 2.78e-15 | 13 |
digestive system | 3.74e-15 | 116 |
digestive tract | 3.74e-15 | 116 |
primitive gut | 3.74e-15 | 116 |
endoderm-derived structure | 1.26e-14 | 118 |
endoderm | 1.26e-14 | 118 |
presumptive endoderm | 1.26e-14 | 118 |
subdivision of digestive tract | 1.32e-13 | 114 |
epithelium of mucosa | 7.30e-11 | 9 |
gastrointestinal system epithelium | 7.30e-11 | 9 |
intestinal epithelium | 7.30e-11 | 9 |
organ component layer | 3.79e-09 | 24 |
simple columnar epithelium | 2.05e-08 | 11 |
digestive tract diverticulum | 3.47e-08 | 23 |
sac | 3.47e-08 | 23 |
liver | 1.53e-07 | 22 |
epithelial sac | 1.53e-07 | 22 |
digestive gland | 1.53e-07 | 22 |
epithelium of foregut-midgut junction | 1.53e-07 | 22 |
anatomical boundary | 1.53e-07 | 22 |
hepatobiliary system | 1.53e-07 | 22 |
foregut-midgut junction | 1.53e-07 | 22 |
hepatic diverticulum | 1.53e-07 | 22 |
liver primordium | 1.53e-07 | 22 |
septum transversum | 1.53e-07 | 22 |
liver bud | 1.53e-07 | 22 |