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FFCP PHASE1:Mm9::chr11:93905425..93905435,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=70834
|EntrezGene=70834
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q5NC72
|UniProt=Q5NC72
|association_with_transcript=0bp_to_ENSMUST00000132079_5end
|association_with_transcript=0bp_to_ENSMUST00000132079_5end
|cluster_id=chr11:93905425..93905435,+
|description=CAGE_peak_8_at_Spag9_5end
|description=CAGE_peak_8_at_Spag9_5end
|id=chr11:93905425..93905435,+
|id=chr11:93905425..93905435,+
|ontology_enrichment_celltype=CL:0000540!1.68e-14!33;CL:0000047!1.68e-14!33;CL:0000031!1.68e-14!33;CL:0000404!1.68e-14!33;CL:0000117!6.46e-13!23;CL:0000337!6.46e-13!23;CL:0000221!1.79e-12!44;CL:0000133!1.79e-12!44;CL:0002319!6.04e-12!43;CL:0000393!2.79e-10!39;CL:0000211!2.79e-10!39;CL:0000055!2.14e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,9.15e-12,23;CL:0000337,9.15e-12,23;CL:0000540,1.05e-08,33;CL:0000047,1.05e-08,33;CL:0000031,1.05e-08,33;CL:0000404,1.05e-08,33;CL:0002610,2.96e-08,3;CL:0002612,1.60e-07,3;CL:0002614,1.77e-07,3;CL:0002319,4.35e-07,43;CL:0000393,6.10e-07,39;CL:0000211,6.10e-07,39;CL:0000221,7.36e-07,44;CL:0000133,7.36e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.63e-32!73;UBERON:0005743!1.63e-32!73;UBERON:0000073!1.53e-31!75;UBERON:0001016!1.53e-31!75;UBERON:0004121!7.88e-28!102;UBERON:0000924!7.88e-28!102;UBERON:0006601!7.88e-28!102;UBERON:0002346!1.16e-25!71;UBERON:0003075!1.16e-25!71;UBERON:0007284!1.16e-25!71;UBERON:0001049!5.33e-25!52;UBERON:0005068!5.33e-25!52;UBERON:0006241!5.33e-25!52;UBERON:0007135!5.33e-25!52;UBERON:0000033!1.30e-24!63;UBERON:0000955!2.95e-24!50;UBERON:0006238!2.95e-24!50;UBERON:0002616!1.72e-23!49;UBERON:0003056!2.49e-20!49;UBERON:0003080!8.66e-20!40;UBERON:0002020!4.40e-19!34;UBERON:0002780!5.82e-19!39;UBERON:0001890!5.82e-19!39;UBERON:0006240!5.82e-19!39;UBERON:0002791!4.27e-16!29;UBERON:0003528!4.27e-16!29;UBERON:0001893!4.27e-16!29;UBERON:0007811!1.22e-12!86;UBERON:0000956!5.81e-11!21;UBERON:0001869!5.81e-11!21;UBERON:0000203!5.81e-11!21;UBERON:0000153!6.03e-11!94;UBERON:0002619!3.81e-09!17;UBERON:0002021!2.49e-08!10;UBERON:0000411!2.49e-08!10;UBERON:0001950!2.49e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.18e-44,54;UBERON:0001049,1.69e-40,52;UBERON:0005068,1.69e-40,52;UBERON:0006241,1.69e-40,52;UBERON:0007135,1.69e-40,52;UBERON:0001017,5.34e-40,73;UBERON:0001016,1.01e-38,75;UBERON:0000955,6.49e-34,47;UBERON:0006238,6.49e-34,47;UBERON:0002020,2.72e-32,34;UBERON:0002616,3.97e-32,46;UBERON:0002346,1.62e-31,64;UBERON:0003075,1.62e-31,64;UBERON:0007284,1.62e-31,64;UBERON:0004121,6.66e-29,95;UBERON:0000924,6.66e-29,95;UBERON:0006601,6.66e-29,95;UBERON:0010371,1.54e-28,73;UBERON:0003080,1.03e-26,40;UBERON:0003528,3.99e-26,29;UBERON:0002791,3.99e-26,29;UBERON:0001893,3.99e-26,29;UBERON:0002780,7.69e-25,39;UBERON:0001890,7.69e-25,39;UBERON:0006240,7.69e-25,39;UBERON:0010314,4.41e-21,92;UBERON:0003056,9.85e-21,49;UBERON:0002021,1.35e-20,10;UBERON:0000411,1.35e-20,10;UBERON:0001950,1.35e-20,10;UBERON:0002619,2.41e-16,17;UBERON:0000956,2.99e-15,21;UBERON:0001869,2.99e-15,21;UBERON:0000203,2.99e-15,21;UBERON:0000025,2.01e-14,114;UBERON:0004111,4.99e-14,122;UBERON:0003076,5.12e-14,12;UBERON:0003057,5.12e-14,12;UBERON:0002420,1.14e-12,8;UBERON:0007245,1.14e-12,8;UBERON:0010009,1.14e-12,8;UBERON:0010011,1.14e-12,8;UBERON:0000454,1.14e-12,8;UBERON:0011216,5.35e-10,194;UBERON:0002950,1.03e-09,4;UBERON:0001891,1.03e-09,4;UBERON:0009616,1.03e-09,4;UBERON:0010286,1.03e-09,4;UBERON:0002240,2.00e-09,6;UBERON:0005174,2.00e-09,6;UBERON:0001137,2.00e-09,6;UBERON:0004684,2.96e-08,3;UBERON:0002275,2.96e-08,3;UBERON:0000483,1.45e-07,174;UBERON:0002257,1.60e-07,3;UBERON:0002038,1.77e-07,3;UBERON:0009663,1.77e-07,3;UBERON:0009661,1.77e-07,3;UBERON:0000125,1.77e-07,3;UBERON:0002308,1.77e-07,3;UBERON:0000119,2.16e-07,176;UBERON:0001948,2.72e-07,5;UBERON:0002315,2.72e-07,5;UBERON:0000369,5.24e-07,5;UBERON:0002435,5.24e-07,5;UBERON:0000204,5.24e-07,5;UBERON:0010082,5.24e-07,5
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,0,0.768436610643109,0.414758449233911,0.945041568321835,0.420649922702764,0.285650984403804,1.32521124570968,0.61245399607477,0.0958454710182364,0.919218786610021,7.70811166995721,3.83062014255563,4.6081959976873,1.31886287730194,0.457438218012048,1.56274011167028,2.51264699101243,3.37657566019008,3.97275444219706,5.30331453852602,2.56269025438385,1.67759501242771,0.075726193333184,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0.985903938436763,0,0,0,0,0,0,0.34255163915718,0,0.445326417194474,0.173485326766136,0,0,0.301445281105245,0.470354828542819,0,0,0,0,0,0,0,0,2.92780797011547,2.51336048176146,0,0,0,0,4.79330046095433,4.11750542536764,1.50785222535437,4.51943232499919,5.11430914660661,3.53239675751252,3.73154905055843,0,0.124406970610093,0,0.210441855886474,0.260240885925407,0,0,0.452114453507145,0.408218994907967,0.640568601424249,0.468508622798644,0.776110112217047,0,0,0,0,0,0.696504333044333,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0.462801338662135,0.232533944750408,0,0.350296027101508,0,0.820837320395476,0.162137619091711,0.292399974850665,0.439100230582101,0.268412837520744,3.99550902271842,1.13195073617213,0,0,0.213288250535234,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0.203651327845314,0,0.350679099451593,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0.315270288212382,0,0,0,0,0,0,0,0,0,5.29816946959713,2.46144541843627,0,0.757412781613119,0.315508219416257,0.390438744296638,0.861693590931196,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0.584511715822624,0,2.89189184779626,0.425820255624806,0.178065603667255,0,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0,0,0,0,1.02131881726136,0.36012218806262,0,0.214337035031592,0.709360934569094,0.535106452806212,0.493647061806363,0.304464949114599,0,0,0.220528398054962,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,5.19190845629427,0.170870880797853,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0,0.0826534557253359,0,0,0,0.56369293868419,0.448549638131936,0,0.583353565032143,0.129159823477731,0.337912250981556,0.469428954583016,0.651021924219751,1.46803082195995,0.966336483304024,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,2.82375921308533,1.38097570952153,1.14579102687879,2.06223818812425,2.74033007908257,4.5323633843382,1.35004500046361,5.40385443869065,4.07828168085784,3.10656187051092,0.518936737920883,0,0.512200817262403,0,0.209613162627982,0.367687016900028,0,0.206035057238894,0,0.758091635291392,0,0.377252682772152,0.280924522409647,0.320125762024346,0.287177344778066,0,0.115884325944855,0.192909220463705,0.412085900803307,0.441596760403192,0.342869252385415,0.532427418478012,0,0.436039249896986,0.282328141245992,0.169229215783353,0.548783918618318,0.526139422875686,0.271608227691724,0,0.118635018124174,0.197008964751127,0.818462086339379,0.464810523557898,0,0,0.233931608445408,0.429742108096597,0.191288332068843,0.661774257358546,0.231867835620421
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,0,0.768436610643109,0.414758449233911,0.945041568321835,0.420649922702764,0.285650984403804,1.32521124570968,0.61245399607477,0.0958454710182364,0.919218786610021,7.70811166995721,3.83062014255563,4.6081959976873,1.31886287730194,0.457438218012048,1.56274011167028,2.51264699101243,3.37657566019008,3.97275444219706,5.30331453852602,2.56269025438385,1.67759501242771,0.075726193333184,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0.985903938436763,0,0,0,0,0,0,0.34255163915718,0,0.445326417194474,0.173485326766136,0,0,0.301445281105245,0.470354828542819,0,0,0,0,0,0,0,0,2.92780797011547,2.51336048176146,0,0,0,0,4.79330046095433,4.11750542536764,1.50785222535437,4.51943232499919,5.11430914660661,3.53239675751252,3.73154905055843,0,0.124406970610093,0,0.210441855886474,0.260240885925407,0,0,0.452114453507145,0.408218994907967,0.640568601424249,0.468508622798644,0.776110112217047,0,0,0,0,0,0.696504333044333,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0.462801338662135,0.232533944750408,0,0.350296027101508,0,0.820837320395476,0.162137619091711,0.292399974850665,0.439100230582101,0.268412837520744,3.99550902271842,1.13195073617213,0,0,0.213288250535234,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0.203651327845314,0,0.350679099451593,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0.315270288212382,0,0,0,0,0,0,0,0,0,5.29816946959713,2.46144541843627,0,0.757412781613119,0.315508219416257,0.390438744296638,0.861693590931196,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0.584511715822624,0,2.89189184779626,0.425820255624806,0.178065603667255,0,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0.363533729477506,0,0,0,0,1.02131881726136,0.36012218806262,0,0.214337035031592,0.709360934569094,0.535106452806212,0.493647061806363,0.304464949114599,0,0,0.220528398054962,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,5.19190845629427,0.170870880797853,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0,0.0826534557253359,0,0,0,0.56369293868419,0.448549638131936,0,0.583353565032143,0.129159823477731,0.337912250981556,0.469428954583016,0.651021924219751,1.46803082195995,0.966336483304024,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,2.82375921308533,1.38097570952153,1.14579102687879,2.06223818812425,2.74033007908257,4.5323633843382,1.35004500046361,5.40385443869065,4.07828168085784,3.10656187051092,0.518936737920883,0,0.512200817262403,0,0.209613162627982,0.367687016900028,0,0.206035057238894,0,0.758091635291392,0,0.377252682772152,0.280924522409647,0.320125762024346,0.287177344778066,0,0.115884325944855,0.192909220463705,0.412085900803307,0.441596760403192,0.342869252385415,0.532427418478012,0,0.436039249896986,0.282328141245992,0.169229215783353,0.548783918618318,0.526139422875686,0.271608227691724,0,0.118635018124174,0.197008964751127,0.818462086339379,0.464810523557898,0,0,0.233931608445408,0.429742108096597,0.191288332068843,0.661774257358546,0.231867835620421
|short_description=p8@Spag9
|short_description=p8@Spag9
}}
}}

Latest revision as of 23:32, 25 September 2015

Short description:p8@Spag9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_8_at_Spag9_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000132079_5end
EntrezGene:Spag9
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p8@Spag9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.83
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.32
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.30
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.99
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I22.51
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.79
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F11.51
cortex, adult.CNhs10473.12-14D54.52
cortex, neonate N30.CNhs11107.1392-42F25.11
diencephalon, adult.CNhs10482.20-12F23.53
diencephalon, neonate N30.CNhs11201.1388-42B23.73
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E84.00
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C25.30
medulla oblongata, neonate N30.CNhs11200.1396-42A32.46
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C95.19
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D91.47
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.18e-4454
neural tube1.69e-4052
neural rod1.69e-4052
future spinal cord1.69e-4052
neural keel1.69e-4052
central nervous system5.34e-4073
nervous system1.01e-3875
brain6.49e-3447
future brain6.49e-3447
gray matter2.72e-3234
regional part of brain3.97e-3246
neurectoderm1.62e-3164
neural plate1.62e-3164
presumptive neural plate1.62e-3164
ectoderm-derived structure6.66e-2995
ectoderm6.66e-2995
presumptive ectoderm6.66e-2995
ecto-epithelium1.54e-2873
anterior neural tube1.03e-2640
brain grey matter3.99e-2629
regional part of telencephalon3.99e-2629
telencephalon3.99e-2629
regional part of forebrain7.69e-2539
forebrain7.69e-2539
future forebrain7.69e-2539
structure with developmental contribution from neural crest4.41e-2192
pre-chordal neural plate9.85e-2149
occipital lobe1.35e-2010
visual cortex1.35e-2010
neocortex1.35e-2010
regional part of cerebral cortex2.41e-1617
cerebral cortex2.99e-1521
cerebral hemisphere2.99e-1521
pallium2.99e-1521
tube2.01e-14114
anatomical conduit4.99e-14122
posterior neural tube5.12e-1412
chordal neural plate5.12e-1412
basal ganglion1.14e-128
nuclear complex of neuraxis1.14e-128
aggregate regional part of brain1.14e-128
collection of basal ganglia1.14e-128
cerebral subcortex1.14e-128
organ system subdivision5.35e-10194
regional part of midbrain1.03e-094
midbrain1.03e-094
presumptive midbrain1.03e-094
midbrain neural tube1.03e-094
spinal cord2.00e-096
dorsal region element2.00e-096
dorsum2.00e-096
raphe nuclei2.96e-083
reticular formation2.96e-083
epithelium1.45e-07174
ventral horn of spinal cord1.60e-073
substantia nigra1.77e-073
telencephalic nucleus1.77e-073
midbrain nucleus1.77e-073
neural nucleus1.77e-073
nucleus of brain1.77e-073
cell layer2.16e-07176
regional part of spinal cord2.72e-075
gray matter of spinal cord2.72e-075
corpus striatum5.24e-075
striatum5.24e-075
ventral part of telencephalon5.24e-075
future corpus striatum5.24e-075
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