FFCP PHASE1:Hg19::chr10:11250483..11250503,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:11250483..11250503,+ | |||
|coexpression_cluster_id=C74 | |||
|description=CAGE_peak_at_chr10:11250483..11250503,+ | |description=CAGE_peak_at_chr10:11250483..11250503,+ | ||
|id=chr10:11250483..11250503,+ | |id=chr10:11250483..11250503,+ | ||
|ontology_enrichment_celltype=CL:0000738!4.42e-17!140;CL:0002031!1.46e-15!124;CL:0000557!1.01e-14!71;CL:0002032!4.15e-14!165;CL:0000837!4.15e-14!165;CL:0000839!6.41e-14!70;CL:0000037!1.02e-13!172;CL:0000566!1.02e-13!172;CL:0000766!3.66e-13!76;CL:0000988!3.30e-12!182;CL:0000763!6.85e-12!112;CL:0000049!6.85e-12!112;CL:0002087!7.41e-12!119;CL:0002009!1.12e-10!65;CL:0002194!3.19e-10!63;CL:0000576!3.19e-10!63;CL:0000040!3.19e-10!63;CL:0000559!3.19e-10!63;CL:0000990!8.58e-10!8;CL:0002274!2.58e-09!5;CL:0000457!2.58e-09!5;CL:0002191!2.58e-09!5;CL:0000097!2.58e-09!5;CL:0000831!2.58e-09!5;CL:0002028!2.58e-09!5;CL:0002057!6.86e-09!42;CL:0000860!5.38e-08!45;CL:0000451!9.18e-08!10;CL:0000148!6.39e-07!10;CL:0000541!6.39e-07!10 | |ontology_enrichment_celltype=CL:0000738!4.42e-17!140;CL:0002031!1.46e-15!124;CL:0000557!1.01e-14!71;CL:0002032!4.15e-14!165;CL:0000837!4.15e-14!165;CL:0000839!6.41e-14!70;CL:0000037!1.02e-13!172;CL:0000566!1.02e-13!172;CL:0000766!3.66e-13!76;CL:0000988!3.30e-12!182;CL:0000763!6.85e-12!112;CL:0000049!6.85e-12!112;CL:0002087!7.41e-12!119;CL:0002009!1.12e-10!65;CL:0002194!3.19e-10!63;CL:0000576!3.19e-10!63;CL:0000040!3.19e-10!63;CL:0000559!3.19e-10!63;CL:0000990!8.58e-10!8;CL:0002274!2.58e-09!5;CL:0000457!2.58e-09!5;CL:0002191!2.58e-09!5;CL:0000097!2.58e-09!5;CL:0000831!2.58e-09!5;CL:0002028!2.58e-09!5;CL:0002057!6.86e-09!42;CL:0000860!5.38e-08!45;CL:0000451!9.18e-08!10;CL:0000148!6.39e-07!10;CL:0000541!6.39e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000148;2.14e-15;10!CL:0000453;1.30e-11;5!CL:0000147;6.30e-11;14!CL:0000990;6.88e-11;8!CL:0002567;2.62e-09;3!CL:0000451;6.30e-09;10!CL:0000710;1.45e-07;20!CL:0002566;1.63e-07;1!CL:0002127;2.59e-07;1!CL:0000911;2.59e-07;1!CL:0000814;2.59e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.11e-15,10;CL:0000541,2.11e-15,10;CL:0000453,1.25e-11,5;CL:0000147,6.24e-11,14;CL:0000990,7.63e-11,8;CL:0002567,2.62e-09,3;CL:0000451,6.85e-09,10;CL:0000738,1.13e-07,136;CL:0000710,1.44e-07,20;CL:0002566,1.54e-07,1;CL:0002127,2.84e-07,1;CL:0000914,2.84e-07,1;CL:0000911,2.84e-07,1;CL:0000814,2.84e-07,1;CL:0002042,2.84e-07,1;CL:0002039,2.84e-07,1;CL:0002040,2.84e-07,1;CL:0002041,2.84e-07,1;CL:0002032,5.61e-07,161;CL:0000837,5.61e-07,161 | |||
|ontology_enrichment_development_v019=UBERON:0006222;1.23e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2355;5.18e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,3.85e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!8.62e-20!57;UBERON:0005068!8.62e-20!57;UBERON:0006241!8.62e-20!57;UBERON:0007135!8.62e-20!57;UBERON:0002780!1.71e-17!41;UBERON:0001890!1.71e-17!41;UBERON:0006240!1.71e-17!41;UBERON:0002616!1.82e-17!59;UBERON:0003080!6.38e-17!42;UBERON:0002619!7.13e-17!22;UBERON:0001950!1.28e-16!20;UBERON:0000955!5.81e-16!69;UBERON:0006238!5.81e-16!69;UBERON:0001893!5.83e-16!34;UBERON:0001869!2.87e-15!32;UBERON:0001017!3.97e-15!82;UBERON:0007023!5.68e-15!115;UBERON:0002791!8.79e-15!33;UBERON:0000956!2.18e-14!25;UBERON:0000203!2.18e-14!25;UBERON:0002020!4.57e-14!34;UBERON:0003528!4.57e-14!34;UBERON:0005743!5.35e-14!86;UBERON:0002390!1.07e-13!102;UBERON:0003061!1.07e-13!102;UBERON:0002193!2.81e-13!112;UBERON:0000073!1.13e-12!94;UBERON:0001016!1.13e-12!94;UBERON:0002371!3.98e-12!80;UBERON:0003075!4.19e-12!86;UBERON:0007284!4.19e-12!86;UBERON:0002405!7.87e-12!115;UBERON:0002346!3.45e-11!90;UBERON:0000200!8.08e-11!6;UBERON:0001474!1.03e-10!86;UBERON:0003056!1.07e-09!61;UBERON:0004765!9.28e-09!101;UBERON:0001434!9.28e-09!101;UBERON:0004177!1.74e-08!7;UBERON:0000153!7.64e-08!129;UBERON:0007811!7.64e-08!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002336;2.59e-07;1!UBERON:0011215;2.59e-07;1!UBERON:0001018;2.59e-07;1!UBERON:0002473;2.59e-07;1!UBERON:0005340;2.59e-07;1!UBERON:0003544;2.59e-07;1!UBERON:0005970;2.59e-07;1!UBERON:0002316;2.59e-07;1!UBERON:0001020;2.59e-07;1!UBERON:0002437;2.59e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002336,2.67e-07,1;UBERON:0011215,2.67e-07,1;UBERON:0001018,2.67e-07,1;UBERON:0002473,2.67e-07,1;UBERON:0005340,2.67e-07,1;UBERON:0003544,2.67e-07,1;UBERON:0005970,2.67e-07,1;UBERON:0002316,2.67e-07,1;UBERON:0001020,2.67e-07,1;UBERON:0002437,2.67e-07,1 | |||
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|short_description=p@chr10:11250483..11250503,+ | |short_description=p@chr10:11250483..11250503,+ | ||
}} | }} |
Latest revision as of 10:25, 23 July 2015
Short description: | p@chr10:11250483..11250503, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:11250483..11250503, + |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.11e-15 | 10 |
melanoblast | 2.11e-15 | 10 |
Langerhans cell | 1.25e-11 | 5 |
pigment cell | 6.24e-11 | 14 |
conventional dendritic cell | 7.63e-11 | 8 |
light melanocyte | 2.62e-09 | 3 |
dendritic cell | 6.85e-09 | 10 |
leukocyte | 1.13e-07 | 136 |
neurecto-epithelial cell | 1.44e-07 | 20 |
dark melanocyte | 1.54e-07 | 1 |
innate effector T cell | 2.84e-07 | 1 |
immature NK T cell | 2.84e-07 | 1 |
effector T cell | 2.84e-07 | 1 |
mature NK T cell | 2.84e-07 | 1 |
immature NK T cell stage IV | 2.84e-07 | 1 |
immature NK T cell stage I | 2.84e-07 | 1 |
immature NK T cell stage II | 2.84e-07 | 1 |
immature NK T cell stage III | 2.84e-07 | 1 |
hematopoietic oligopotent progenitor cell | 5.61e-07 | 161 |
hematopoietic multipotent progenitor cell | 5.61e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
corpus callosum | 2.67e-07 | 1 |
central nervous system cell part cluster | 2.67e-07 | 1 |
axon tract | 2.67e-07 | 1 |
intercerebral commissure | 2.67e-07 | 1 |
dorsal telencephalic commissure | 2.67e-07 | 1 |
brain white matter | 2.67e-07 | 1 |
brain commissure | 2.67e-07 | 1 |
white matter | 2.67e-07 | 1 |
nervous system commissure | 2.67e-07 | 1 |
cerebral hemisphere white matter | 2.67e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
anemia | 3.85e-07 | 1 |