FFCP PHASE1:Mm9::chr14:102268635..102268649,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=380928 | |EntrezGene=380928 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-37bp_to_ENSMUST00000159812_5end | |association_with_transcript=-37bp_to_ENSMUST00000159812_5end | ||
|cluster_id=chr14:102268635..102268649,+ | |||
|description=CAGE_peak_23_at_Lmo7_5end | |description=CAGE_peak_23_at_Lmo7_5end | ||
|id=chr14:102268635..102268649,+ | |id=chr14:102268635..102268649,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.99e-11,3;CL:0000066,6.89e-10,25;CL:0000239,2.10e-09,6;CL:0000677,2.10e-09,6;CL:0000584,2.10e-09,6;CL:0000075,4.56e-08,7;CL:0002076,9.21e-08,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.92e-09!15;UBERON:0001242!1.96e-07!13;UBERON:0000060!1.96e-07!13;UBERON:0001262!1.96e-07!13;UBERON:0004786!1.96e-07!13;UBERON:0004923!3.20e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.01e-21,15;UBERON:0001242,3.70e-16,13;UBERON:0001262,3.70e-16,13;UBERON:0004786,3.70e-16,13;UBERON:0004923,1.31e-15,24;UBERON:0000160,1.59e-13,31;UBERON:0000331,3.45e-11,3;UBERON:0002116,3.45e-11,3;UBERON:0001204,3.45e-11,3;UBERON:0001168,3.45e-11,3;UBERON:0005409,1.37e-09,47;UBERON:0004119,1.56e-08,118;UBERON:0000925,1.56e-08,118;UBERON:0006595,1.56e-08,118;UBERON:0002108,1.70e-08,4;UBERON:0001962,5.29e-08,2;UBERON:0001961,5.29e-08,2;UBERON:0001744,5.29e-08,2;UBERON:0001007,1.04e-07,116;UBERON:0001555,1.04e-07,116;UBERON:0007026,1.04e-07,116 | |||
|phase1_expression=0,3.48975407639361,3.63999391511629,1.81478526784098,0.500895729946347,0.839396359559449,1.16806320297763,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.255129870453209,0,0,2.23989391910769,2.75291137280604,4.01962374880514,3.01533397311352,2.15471232685889,2.09025761402011,2.26827116783938,3.10422714917427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0.151143120213571,0.289864488701678,0,0,0,0,0,0.140444420131752,0.681721290312231,1.03914401841148,1.41335829804136,0,1.28326477414318,5.09610479413291,0,0,0,0,0.34255163915718,0.517875767294343,0,0,0,0,0,0,0,0.494389935468748,0.578397427679647,0,0.161766849947409,0,0,0,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0.210441855886474,0,0.229902104433473,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0.536546802799238,0.583826711835847,0.16455984991348,0.32833492815819,0.972825714550269,0.584799949701329,0,0.268412837520744,0,0,3.63460661282178,1.58670339998127,0,0,0,0.201683524623343,0,0,0.474529061544512,0.329397909448022,0.754005626400808,0.795825888164603,0.974820435595601,0,1.08069024937347,1.1948476395262,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.590440591918409,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0,0.585400943573396,1.41871629695572,0.44292937929755,0.637819074629948,0.983179888294428,1.55416483679306,1.15719246865209,0,0,0,0.275936746304732,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,1.64270195644597,0.63549621259146,0.441056796109924,0,0.322928853391811,0.180938774784468,0.238744688006273,0.328281799490123,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.165306911450672,0,1.03691978633434,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.375364950902364,0.183151624267265,0,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0,0,0.468207537349412,0.0640251524048693,0.17230640686684,0.952587382566147,0.115884325944855,0.38581844092741,0,0.294397840268795,0,0.177475806159338,0.715308569841963,0.436039249896986,0.0941093804153306,0.25384382367503,0,0,0.135804113845862,0.561142271657738,0,0.197008964751127,0.818462086339379,0,0.385813221962283,0.249810577937946,0.233931608445408,0.214871054048298,0.765153328275374,0.220591419119515,0 | |phase1_expression=0,3.48975407639361,3.63999391511629,1.81478526784098,0.500895729946347,0.839396359559449,1.16806320297763,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.255129870453209,0,0,2.23989391910769,2.75291137280604,4.01962374880514,3.01533397311352,2.15471232685889,2.09025761402011,2.26827116783938,3.10422714917427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0.151143120213571,0.289864488701678,0,0,0,0,0,0.140444420131752,0.681721290312231,1.03914401841148,1.41335829804136,0,1.28326477414318,5.09610479413291,0,0,0,0,0.34255163915718,0.517875767294343,0,0,0,0,0,0,0,0.494389935468748,0.578397427679647,0,0.161766849947409,0,0,0,0,0,1.78819938646014,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0.210441855886474,0,0.229902104433473,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0.536546802799238,0.583826711835847,0.16455984991348,0.32833492815819,0.972825714550269,0.584799949701329,0,0.268412837520744,0,0,3.63460661282178,1.58670339998127,0,0,0,0.201683524623343,0,0,0.474529061544512,0.329397909448022,0.754005626400808,0.795825888164603,0.974820435595601,0,1.08069024937347,1.1948476395262,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.590440591918409,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0,0.585400943573396,1.41871629695572,0.44292937929755,0.637819074629948,0.983179888294428,1.55416483679306,1.15719246865209,0,0,0,0.275936746304732,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,1.64270195644597,0.63549621259146,0.441056796109924,0,0.322928853391811,0.180938774784468,0.238744688006273,0.328281799490123,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.165306911450672,0,1.03691978633434,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.375364950902364,0.183151624267265,0,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.206035057238894,0,0,0,0,0.468207537349412,0.0640251524048693,0.17230640686684,0.952587382566147,0.115884325944855,0.38581844092741,0,0.294397840268795,0,0.177475806159338,0.715308569841963,0.436039249896986,0.0941093804153306,0.25384382367503,0,0,0.135804113845862,0.561142271657738,0,0.197008964751127,0.818462086339379,0,0.385813221962283,0.249810577937946,0.233931608445408,0.214871054048298,0.765153328275374,0.220591419119515,0 | ||
|short_description=p23@Lmo7 | |short_description=p23@Lmo7 | ||
}} | }} |
Latest revision as of 14:58, 25 September 2015
Short description: | p23@Lmo7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_23_at_Lmo7_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -37bp_to_ENSMUST00000159812_5end |
EntrezGene: | Lmo7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.99e-11 | 3 |
epithelial cell | 6.89e-10 | 25 |
brush border epithelial cell | 2.10e-09 | 6 |
gut absorptive cell | 2.10e-09 | 6 |
enterocyte | 2.10e-09 | 6 |
columnar/cuboidal epithelial cell | 4.56e-08 | 7 |
endo-epithelial cell | 9.21e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.01e-21 | 15 |
intestinal mucosa | 3.70e-16 | 13 |
wall of intestine | 3.70e-16 | 13 |
gastrointestinal system mucosa | 3.70e-16 | 13 |
organ component layer | 1.31e-15 | 24 |
intestine | 1.59e-13 | 31 |
ileal mucosa | 3.45e-11 | 3 |
ileum | 3.45e-11 | 3 |
mucosa of small intestine | 3.45e-11 | 3 |
wall of small intestine | 3.45e-11 | 3 |
gastrointestinal system | 1.37e-09 | 47 |
endoderm-derived structure | 1.56e-08 | 118 |
endoderm | 1.56e-08 | 118 |
presumptive endoderm | 1.56e-08 | 118 |
small intestine | 1.70e-08 | 4 |
gut-associated lymphoid tissue | 5.29e-08 | 2 |
mucosa-associated lymphoid tissue | 5.29e-08 | 2 |
lymphoid tissue | 5.29e-08 | 2 |
digestive system | 1.04e-07 | 116 |
digestive tract | 1.04e-07 | 116 |
primitive gut | 1.04e-07 | 116 |