FFCP PHASE1:Mm9::chr14:116341817..116341820,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:116341817..116341820,+ | |||
|description=CAGE_peak_at_chr14:116341817..116341820,+ | |description=CAGE_peak_at_chr14:116341817..116341820,+ | ||
|id=chr14:116341817..116341820,+ | |id=chr14:116341817..116341820,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,7.10e-09,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!4.08e-12!10;UBERON:0000411!4.08e-12!10;UBERON:0001950!4.08e-12!10;UBERON:0001049!2.86e-09!52;UBERON:0005068!2.86e-09!52;UBERON:0006241!2.86e-09!52;UBERON:0007135!2.86e-09!52;UBERON:0002020!3.75e-09!34;UBERON:0000489!1.11e-08!21;UBERON:0001017!9.73e-08!73;UBERON:0005743!9.73e-08!73;UBERON:0002346!1.07e-07!71;UBERON:0003075!1.07e-07!71;UBERON:0007284!1.07e-07!71;UBERON:0000955!1.63e-07!50;UBERON:0006238!1.63e-07!50;UBERON:0002619!2.27e-07!17;UBERON:0000073!2.63e-07!75;UBERON:0001016!2.63e-07!75;UBERON:0002298!2.90e-07!6;UBERON:0002616!5.42e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.92e-10,52;UBERON:0005068,2.92e-10,52;UBERON:0006241,2.92e-10,52;UBERON:0007135,2.92e-10,52;UBERON:0002021,5.80e-10,10;UBERON:0000411,5.80e-10,10;UBERON:0001950,5.80e-10,10;UBERON:0000489,1.15e-09,21;UBERON:0002240,1.93e-09,6;UBERON:0005174,1.93e-09,6;UBERON:0001137,1.93e-09,6;UBERON:0002257,7.10e-09,3;UBERON:0002346,4.21e-08,64;UBERON:0003075,4.21e-08,64;UBERON:0007284,4.21e-08,64;UBERON:0002020,4.37e-08,34;UBERON:0000073,6.26e-08,54;UBERON:0001851,3.67e-07,1;UBERON:0005889,3.67e-07,1;UBERON:0010371,6.05e-07,73;UBERON:0001017,6.05e-07,73;UBERON:0002259,6.32e-07,1;UBERON:0002314,6.32e-07,1;UBERON:0004061,6.32e-07,1;UBERON:0006777,6.32e-07,1;UBERON:0005882,6.32e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0.157731082679119,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0.856952953211411,0,0,0,0,0,0.638436690425939,0.46081959976873,0,0,0,0.279182999001381,1.68828783009504,0.15279824777681,2.65165726926301,1.28134512719193,0.745597783301202,0,0,0,0.860423876981386,0,0,0,0,0,0.340860645156116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0,0,0,0.220841518460394,0.969750506270444,0,0,0,0.255457055208591,0,0,0,1.04853447583376,0,0,0.695297280769106,1.53429274398198,1.66230435647648,0.648965052271031,0.407357455401265,0,0,0,0,0,0,0,0.272145996605311,0.12811372028485,0,0,0,0,0,0,0.556094498451196,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0.841159794256509,0,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,1.1270773567308,1.01825663922657,1.74557238450863,0.841629838683823,0.505892296994058,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0.963303539926752,0.820481806145422,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.32977250588296,0,0,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724752362478018,2.88030006257865,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,2.30162618253588,0.572895513439397,3.26521046453006,3.42541259885321,0.755393897389701,0.675022500231806,0.45032120322422,0.453142408984205,1.03552062350364,0.103787347584177,0,0.170733605754134,0,0,0,0.44449345560323,0.412070114477788,0.320919209591815,0,0.25347929989024,0,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.347652977834566,0,0,0,0,0.354951612318675,0,0.145346416632329,0.0941093804153306,0.25384382367503,0,0.263069711437843,0.271608227691724,0,0,0,0,0,0.192906610981141,0,0,0,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0.157731082679119,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0.856952953211411,0,0,0,0,0,0.638436690425939,0.46081959976873,0,0,0,0.279182999001381,1.68828783009504,0.15279824777681,2.65165726926301,1.28134512719193,0.745597783301202,0,0,0,0.860423876981386,0,0,0,0,0,0.340860645156116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0,0,0,0.220841518460394,0.969750506270444,0,0,0,0.255457055208591,0,0,0,1.04853447583376,0,0,0.695297280769106,1.53429274398198,1.66230435647648,0.648965052271031,0.407357455401265,0,0,0,0,0,0,0,0.272145996605311,0.12811372028485,0,0,0,0,0,0,0.556094498451196,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0.841159794256509,0,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,1.1270773567308,1.01825663922657,1.74557238450863,0.841629838683823,0.505892296994058,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0,0,0,0,0,0.963303539926752,0.820481806145422,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.32977250588296,0,0,0,0,0,1.29797711407357,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724752362478018,2.88030006257865,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,2.30162618253588,0.572895513439397,3.26521046453006,3.42541259885321,0.755393897389701,0.675022500231806,0.45032120322422,0.453142408984205,1.03552062350364,0.103787347584177,0,0.170733605754134,0,0,0,0.44449345560323,0.412070114477788,0.320919209591815,0,0.25347929989024,0,0.0936415074698824,0.128050304809739,0.114870937911227,0,0.347652977834566,0,0,0,0,0.354951612318675,0,0.145346416632329,0.0941093804153306,0.25384382367503,0,0.263069711437843,0.271608227691724,0,0,0,0,0,0.192906610981141,0,0,0,0,0.220591419119515,0 | ||
|short_description=p@chr14:116341817..116341820,+ | |short_description=p@chr14:116341817..116341820,+ | ||
}} | }} |
Latest revision as of 23:18, 3 August 2015
Short description: | p@chr14:116341817..116341820, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:116341817..116341820, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 7.10e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
neural tube | 2.92e-10 | 52 |
neural rod | 2.92e-10 | 52 |
future spinal cord | 2.92e-10 | 52 |
neural keel | 2.92e-10 | 52 |
occipital lobe | 5.80e-10 | 10 |
visual cortex | 5.80e-10 | 10 |
neocortex | 5.80e-10 | 10 |
cavitated compound organ | 1.15e-09 | 21 |
spinal cord | 1.93e-09 | 6 |
dorsal region element | 1.93e-09 | 6 |
dorsum | 1.93e-09 | 6 |
ventral horn of spinal cord | 7.10e-09 | 3 |
neurectoderm | 4.21e-08 | 64 |
neural plate | 4.21e-08 | 64 |
presumptive neural plate | 4.21e-08 | 64 |
gray matter | 4.37e-08 | 34 |
regional part of nervous system | 6.26e-08 | 54 |
cortex | 3.67e-07 | 1 |
zygote cortex | 3.67e-07 | 1 |
ecto-epithelium | 6.05e-07 | 73 |
central nervous system | 6.05e-07 | 73 |
corpora quadrigemina | 6.32e-07 | 1 |
midbrain tectum | 6.32e-07 | 1 |
neural tube mantle layer | 6.32e-07 | 1 |
tectal plate | 6.32e-07 | 1 |
neural tube alar plate | 6.32e-07 | 1 |