FFCP PHASE1:Hg19::chr10:16563446..16563457,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=389941 | |EntrezGene=389941 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=19359 | |HGNC=19359 | ||
|TSSclassifier=strong | |||
|UniProt=C9JUV3 | |UniProt=C9JUV3 | ||
|association_with_transcript=-382bp_to_ENST00000448557_5end | |association_with_transcript=-382bp_to_ENST00000448557_5end | ||
|cluster_id=chr10:16563446..16563457,- | |||
|coexpression_cluster_id=C2998 | |||
|description=CAGE_peak_6_at_C1QL3_5end | |description=CAGE_peak_6_at_C1QL3_5end | ||
|id=chr10:16563446..16563457,- | |id=chr10:16563446..16563457,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3119;2.18e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,2.00e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0001049!5.78e-31!57;UBERON:0005068!5.78e-31!57;UBERON:0006241!5.78e-31!57;UBERON:0007135!5.78e-31!57;UBERON:0000955!5.50e-30!69;UBERON:0006238!5.50e-30!69;UBERON:0002616!9.09e-30!59;UBERON:0005743!8.06e-28!86;UBERON:0002619!2.84e-27!22;UBERON:0000073!5.28e-27!94;UBERON:0001016!5.28e-27!94;UBERON:0001017!5.61e-27!82;UBERON:0002020!5.84e-27!34;UBERON:0003528!5.84e-27!34;UBERON:0003075!1.18e-25!86;UBERON:0007284!1.18e-25!86;UBERON:0002780!1.39e-25!41;UBERON:0001890!1.39e-25!41;UBERON:0006240!1.39e-25!41;UBERON:0001950!2.49e-25!20;UBERON:0001869!3.16e-25!32;UBERON:0003080!6.66e-25!42;UBERON:0002346!2.79e-24!90;UBERON:0000956!7.82e-24!25;UBERON:0000203!7.82e-24!25;UBERON:0001893!1.32e-23!34;UBERON:0007023!9.22e-22!115;UBERON:0002791!7.46e-21!33;UBERON:0003056!8.70e-21!61;UBERON:0000033!6.41e-18!123;UBERON:0000153!7.76e-17!129;UBERON:0007811!7.76e-17!129;UBERON:0000988!6.49e-14!3;UBERON:0000200!5.34e-13!6;UBERON:0004121!1.21e-12!169;UBERON:0000924!3.17e-12!173;UBERON:0006601!3.17e-12!173;UBERON:0001905!4.22e-11!2;UBERON:0002757!4.22e-11!2;UBERON:0010134!4.22e-11!2;UBERON:0002784!4.22e-11!2;UBERON:0005408!4.22e-11!2;UBERON:0001899!4.22e-11!2;UBERON:0001870!4.43e-11!2;UBERON:0002148!5.83e-10!2;UBERON:0009662!5.83e-10!2;UBERON:0004733!3.43e-09!12;UBERON:0002028!3.43e-09!12;UBERON:0007277!3.43e-09!12;UBERON:0001872!4.64e-09!5;UBERON:0002298!4.66e-09!8;UBERON:0000349!5.63e-09!5;UBERON:0004732!1.82e-08!13;UBERON:0002680!3.30e-08!9;UBERON:0001895!3.30e-08!9;UBERON:0010092!3.30e-08!9;UBERON:0000025!1.55e-07!194;UBERON:0003076!2.65e-07!15;UBERON:0003057!2.65e-07!15;UBERON:0006331!6.47e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002022;1.81e-40;1!UBERON:0001905;5.15e-21;2!UBERON:0002757;5.15e-21;2!UBERON:0010134;5.15e-21;2!UBERON:0005408;5.15e-21;2!UBERON:0001899;5.15e-21;2!UBERON:0003296;3.26e-11;4!UBERON:0010133;3.26e-11;4!UBERON:0002784;3.26e-11;4!UBERON:0001894;5.86e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002022,2.21e-40,1;UBERON:0001905,4.66e-21,2;UBERON:0002757,4.66e-21,2;UBERON:0010134,4.66e-21,2;UBERON:0005408,4.66e-21,2;UBERON:0001899,4.66e-21,2;UBERON:0003296,3.10e-11,4;UBERON:0010133,3.10e-11,4;UBERON:0002784,3.10e-11,4;UBERON:0001894,5.70e-07,7;UBERON:0006222,5.70e-07,7 | |||
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|short_description=p6@C1QL3 | |short_description=p6@C1QL3 | ||
}} | }} |
Latest revision as of 09:10, 17 September 2015
Short description: | p6@C1QL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_C1QL3_5end |
Coexpression cluster: | C2998_gastrointestinal_pineal_medial_retinoblastoma_cerebral_frontal_brain |
Association with transcript: | -382bp_to_ENST00000448557_5end |
EntrezGene: | C1QL3 |
HGNC: | 19359 |
UniProt: | C9JUV3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
insula | 2.21e-40 | 1 |
pineal body | 4.66e-21 | 2 |
regional part of epithalamus | 4.66e-21 | 2 |
secretory circumventricular organ | 4.66e-21 | 2 |
circumventricular organ | 4.66e-21 | 2 |
epithalamus | 4.66e-21 | 2 |
gland of diencephalon | 3.10e-11 | 4 |
neuroendocrine gland | 3.10e-11 | 4 |
regional part of diencephalon | 3.10e-11 | 4 |
diencephalon | 5.70e-07 | 7 |
future diencephalon | 5.70e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 2.00e-12 | 14 |