FFCP PHASE1:Hg19::chr10:25241660..25241696,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56952 | |EntrezGene=56952 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23333 | |HGNC=23333 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NRG1,F8WCE0 | |UniProt=Q9NRG1,F8WCE0 | ||
|association_with_transcript=-127bp_to_ENST00000320152,ENST00000358336,NM_020200,uc001ise.1,uc001isf.1,uc009xkm.1,uc010qdd.1_5end | |association_with_transcript=-127bp_to_ENST00000320152,ENST00000358336,NM_020200,uc001ise.1,uc001isf.1,uc009xkm.1,uc010qdd.1_5end | ||
|cluster_id=chr10:25241660..25241696,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_3_at_PRTFDC1_5end | |description=CAGE_peak_3_at_PRTFDC1_5end | ||
|id=chr10:25241660..25241696,- | |id=chr10:25241660..25241696,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.73e-14;82!UBERON:0006241;2.14e-10;3!UBERON:0003057;2.14e-10;3!UBERON:0006222;1.22e-08;1!UBERON:0005425;3.32e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.56e-44!94;UBERON:0001016!6.56e-44!94;UBERON:0001049!1.98e-43!57;UBERON:0005068!1.98e-43!57;UBERON:0006241!1.98e-43!57;UBERON:0007135!1.98e-43!57;UBERON:0001017!8.87e-42!82;UBERON:0005743!1.34e-40!86;UBERON:0002616!6.02e-35!59;UBERON:0000955!2.15e-33!69;UBERON:0006238!2.15e-33!69;UBERON:0003075!4.44e-32!86;UBERON:0007284!4.44e-32!86;UBERON:0001893!1.34e-31!34;UBERON:0002020!2.63e-31!34;UBERON:0003528!2.63e-31!34;UBERON:0002780!5.02e-31!41;UBERON:0001890!5.02e-31!41;UBERON:0006240!5.02e-31!41;UBERON:0002791!2.91e-30!33;UBERON:0003080!5.22e-30!42;UBERON:0002346!7.76e-30!90;UBERON:0001869!4.76e-29!32;UBERON:0007023!3.74e-26!115;UBERON:0003056!3.32e-23!61;UBERON:0000956!1.30e-22!25;UBERON:0000203!1.30e-22!25;UBERON:0004121!1.09e-21!169;UBERON:0002619!1.36e-21!22;UBERON:0000153!2.63e-21!129;UBERON:0007811!2.63e-21!129;UBERON:0000924!1.11e-20!173;UBERON:0006601!1.11e-20!173;UBERON:0000033!1.55e-20!123;UBERON:0001950!4.29e-19!20;UBERON:0003076!2.32e-14!15;UBERON:0003057!2.32e-14!15;UBERON:0004732!5.99e-12!13;UBERON:0000025!9.23e-11!194;UBERON:0004733!1.12e-10!12;UBERON:0002028!1.12e-10!12;UBERON:0007277!1.12e-10!12;UBERON:0002420!3.70e-10!9;UBERON:0007245!3.70e-10!9;UBERON:0010009!3.70e-10!9;UBERON:0010011!3.70e-10!9;UBERON:0000454!3.70e-10!9;UBERON:0002308!4.08e-10!9;UBERON:0000125!4.08e-10!9;UBERON:0000119!6.65e-09!312;UBERON:0000483!1.01e-08!309;UBERON:0002298!1.10e-08!8;UBERON:0001871!2.94e-08!7;UBERON:0002021!4.38e-08!5;UBERON:0000349!4.97e-08!5;UBERON:0004111!5.46e-08!241;UBERON:0000064!5.58e-08!219;UBERON:0009663!1.01e-07!7;UBERON:0000477!1.21e-07!286;UBERON:0000481!2.16e-07!347;UBERON:0002680!3.64e-07!9;UBERON:0001895!3.64e-07!9;UBERON:0010092!3.64e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;7.05e-39;41!UBERON:0001890;7.05e-39;41!UBERON:0001869;7.41e-34;32!UBERON:0001893;1.21e-33;34!UBERON:0002791;1.17e-29;32!UBERON:0002619;5.07e-28;22!UBERON:0000073;6.88e-26;53!UBERON:0002616;6.88e-26;53!UBERON:0003528;2.75e-25;34!UBERON:0002020;2.75e-25;34!UBERON:0001950;5.71e-25;20!UBERON:0000956;1.33e-24;25!UBERON:0000203;1.33e-24;25!UBERON:0002021;3.65e-22;5!UBERON:0001017;2.35e-21;75!UBERON:0001016;4.71e-20;83!UBERON:0000955;3.00e-18;68!UBERON:0005162;3.12e-15;2!UBERON:0000122;3.12e-15;2!UBERON:0001897;1.03e-14;2!UBERON:0001875;1.03e-14;2!UBERON:0006514;1.03e-14;2!UBERON:0010225;1.03e-14;2!UBERON:0007023;6.93e-14;114!UBERON:0002240;2.14e-10;3!UBERON:0005174;2.14e-10;3!UBERON:0001137;2.14e-10;3!UBERON:0001894;1.44e-09;7!UBERON:0009663;2.17e-09;7!UBERON:0011216;3.47e-09;132!UBERON:0002336;9.76e-09;1!UBERON:0011215;9.76e-09;1!UBERON:0001018;9.76e-09;1!UBERON:0002473;9.76e-09;1!UBERON:0005340;9.76e-09;1!UBERON:0003544;9.76e-09;1!UBERON:0005970;9.76e-09;1!UBERON:0002316;9.76e-09;1!UBERON:0001020;9.76e-09;1!UBERON:0002437;9.76e-09;1!UBERON:0002581;3.32e-08;1!UBERON:0002902;3.32e-08;1!UBERON:0001882;3.32e-08;1!UBERON:0002022;3.32e-08;1!UBERON:0003112;3.32e-08;1!UBERON:0000941;3.32e-08;1!UBERON:0001785;3.32e-08;1!UBERON:0002464;3.32e-08;1!UBERON:0004904;3.32e-08;1!UBERON:0011158;3.32e-08;1!UBERON:0001021;3.32e-08;1!UBERON:0009899;3.32e-08;1!UBERON:0007190;3.32e-08;1!UBERON:0003128;3.32e-08;1!UBERON:0005403;3.32e-08;1!UBERON:0001703;3.32e-08;1!UBERON:0002241;3.32e-08;1!UBERON:0002784;8.51e-08;4!UBERON:0002420;2.09e-07;9!UBERON:0000125;2.09e-07;9!UBERON:0007245;2.09e-07;9!UBERON:0002308;2.09e-07;9!UBERON:0010009;2.09e-07;9!UBERON:0010011;2.09e-07;9!UBERON:0000454;2.09e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.60e-56,81;UBERON:0001049,1.47e-54,56;UBERON:0005068,1.47e-54,56;UBERON:0006241,1.47e-54,56;UBERON:0007135,1.47e-54,56;UBERON:0001016,1.78e-54,89;UBERON:0002780,2.23e-49,41;UBERON:0001890,2.23e-49,41;UBERON:0003080,2.23e-49,41;UBERON:0006240,2.23e-49,41;UBERON:0000073,3.84e-47,53;UBERON:0002616,3.84e-47,53;UBERON:0000955,1.35e-43,68;UBERON:0006238,1.35e-43,68;UBERON:0001893,4.89e-41,34;UBERON:0003075,7.67e-40,82;UBERON:0007284,7.67e-40,82;UBERON:0002346,8.10e-38,86;UBERON:0001869,1.02e-37,32;UBERON:0007023,1.31e-36,114;UBERON:0003056,2.81e-36,61;UBERON:0002791,2.46e-32,32;UBERON:0010371,1.29e-30,104;UBERON:0003528,2.37e-30,34;UBERON:0002020,2.37e-30,34;UBERON:0002619,9.77e-28,22;UBERON:0004121,1.12e-26,171;UBERON:0000924,1.12e-26,171;UBERON:0006601,1.12e-26,171;UBERON:0010314,1.44e-25,132;UBERON:0001950,1.29e-24,20;UBERON:0000956,2.38e-24,25;UBERON:0000203,2.38e-24,25;UBERON:0002021,1.04e-21,5;UBERON:0011216,4.70e-21,223;UBERON:0005162,2.53e-15,2;UBERON:0000122,2.53e-15,2;UBERON:0001875,7.31e-15,2;UBERON:0006514,7.31e-15,2;UBERON:0001897,9.67e-15,2;UBERON:0010225,9.67e-15,2;UBERON:0000025,3.34e-13,192;UBERON:0002240,1.34e-10,3;UBERON:0005174,1.34e-10,3;UBERON:0001137,1.34e-10,3;UBERON:0004111,9.87e-10,240;UBERON:0001894,1.45e-09,7;UBERON:0006222,1.45e-09,7;UBERON:0009663,1.67e-09,7;UBERON:0002336,9.79e-09,1;UBERON:0011215,9.79e-09,1;UBERON:0001018,9.79e-09,1;UBERON:0002473,9.79e-09,1;UBERON:0005340,9.79e-09,1;UBERON:0003544,9.79e-09,1;UBERON:0005970,9.79e-09,1;UBERON:0002316,9.79e-09,1;UBERON:0001020,9.79e-09,1;UBERON:0002437,9.79e-09,1;UBERON:0007190,2.33e-08,1;UBERON:0001882,2.50e-08,1;UBERON:0005403,2.50e-08,1;UBERON:0000941,2.69e-08,1;UBERON:0001785,2.69e-08,1;UBERON:0002464,2.69e-08,1;UBERON:0004904,2.69e-08,1;UBERON:0001021,2.69e-08,1;UBERON:0003902,2.69e-08,1;UBERON:0005425,2.69e-08,1;UBERON:0002022,3.10e-08,1;UBERON:0002902,4.41e-08,1;UBERON:0009899,4.41e-08,1;UBERON:0003112,5.82e-08,1;UBERON:0011158,5.82e-08,1;UBERON:0003128,5.82e-08,1;UBERON:0001703,5.82e-08,1;UBERON:0002241,5.82e-08,1;UBERON:0004761,5.82e-08,1;UBERON:0009617,5.82e-08,1;UBERON:0002581,6.24e-08,1;UBERON:0003076,7.90e-08,15;UBERON:0003057,7.90e-08,15;UBERON:0002784,8.25e-08,4;UBERON:0000483,1.29e-07,306;UBERON:0000119,1.69e-07,309;UBERON:0002420,1.71e-07,9;UBERON:0000125,1.71e-07,9;UBERON:0007245,1.71e-07,9;UBERON:0002308,1.71e-07,9;UBERON:0010009,1.71e-07,9;UBERON:0010011,1.71e-07,9;UBERON:0000454,1.71e-07,9 | |||
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|short_description=p3@PRTFDC1 | |short_description=p3@PRTFDC1 | ||
}} | }} |
Latest revision as of 17:05, 17 September 2015
Short description: | p3@PRTFDC1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PRTFDC1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -127bp_to_ENST00000320152, ENST00000358336, NM_020200, uc001ise.1, uc001isf.1, uc009xkm.1, uc010qdd.1_5end |
EntrezGene: | PRTFDC1 |
HGNC: | 23333 |
UniProt: | Q9NRG1F8WCE0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data