FFCP PHASE1:Hg19::chr10:75410831..75410838,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79933 | |EntrezGene=79933 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23532 | |HGNC=23532 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H987 | |UniProt=Q9H987 | ||
|association_with_transcript=-44bp_to_ENST00000372873,NM_024875,uc001jus.3_5end | |association_with_transcript=-44bp_to_ENST00000372873,NM_024875,uc001jus.3_5end | ||
|cluster_id=chr10:75410831..75410838,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_4_at_SYNPO2L_5end | |description=CAGE_peak_4_at_SYNPO2L_5end | ||
|id=chr10:75410831..75410838,- | |id=chr10:75410831..75410838,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;7.48e-30;1!UBERON:0000358;1.33e-29;1!UBERON:0010227;3.16e-29;1!UBERON:0006603;8.80e-09;65!UBERON:0003104;1.00e-08;31!UBERON:0005062;2.43e-08;4!UBERON:0007284;2.43e-08;4 | |||
|ontology_enrichment_disease=DOID:1287!1.98e-14!4;DOID:114!1.86e-13!2;DOID:178!1.48e-07!1;DOID:326!1.48e-07!1;DOID:3978!1.48e-07!1;DOID:3394!1.48e-07!1;DOID:5844!1.48e-07!1;DOID:2355!2.63e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!1.91e-26!27;UBERON:0003978!4.08e-20!3;UBERON:0009751!4.08e-20!3;UBERON:0000946!4.08e-20!3;UBERON:0002523!4.08e-20!3;UBERON:0005983!4.08e-20!3;UBERON:0002165!4.08e-20!3;UBERON:0002062!4.08e-20!3;UBERON:0007280!4.08e-20!3;UBERON:0000948!6.35e-16!24;UBERON:0005498!6.35e-16!24;UBERON:0004140!6.35e-16!24;UBERON:0009881!6.35e-16!24;UBERON:0004141!6.35e-16!24;UBERON:0003084!6.35e-16!24;UBERON:0007005!6.35e-16!24;UBERON:0004139!6.35e-16!24;UBERON:0004291!6.35e-16!24;UBERON:0002081!5.17e-14!2;UBERON:0002133!5.52e-14!2;UBERON:0000341!1.19e-13!2;UBERON:0003103!5.19e-13!69;UBERON:0004151!1.23e-09!3;UBERON:0001723!1.53e-09!3;UBERON:0001033!1.53e-09!3;UBERON:0010056!1.53e-09!3;UBERON:0007023!2.68e-09!115;UBERON:0002079!5.96e-08!1;UBERON:0002135!6.37e-08!1;UBERON:0000989!6.80e-08!1;UBERON:0008811!6.80e-08!1;UBERON:0006258!6.80e-08!1;UBERON:0005876!6.80e-08!1;UBERON:0004874!6.80e-08!1;UBERON:0002146!7.26e-08!1;UBERON:0005623!7.26e-08!1;UBERON:0002426!8.84e-08!1;UBERON:0003831!8.84e-08!1;UBERON:0003898!8.84e-08!1;UBERON:0004830!8.84e-08!1;UBERON:0001774!8.84e-08!1;UBERON:0003830!8.84e-08!1;UBERON:0005175!8.84e-08!1;UBERON:0003897!8.84e-08!1;UBERON:0001103!8.84e-08!1;UBERON:0010084!8.84e-08!1;UBERON:0002134!9.44e-08!1;UBERON:0005208!9.44e-08!1;UBERON:0005946!9.44e-08!1;UBERON:0005965!9.44e-08!1;UBERON:0002078!9.44e-08!1;UBERON:0001736!1.30e-07!1;UBERON:0006298!1.30e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;3.16e-29;1!UBERON:0002135;3.16e-29;1!UBERON:0002081;2.37e-15;2!UBERON:0002133;2.37e-15;2!UBERON:0000948;2.74e-12;22!UBERON:0007100;6.69e-11;25!UBERON:0001723;8.17e-11;3!UBERON:0001033;8.17e-11;3!UBERON:0003978;1.09e-10;3!UBERON:0004151;1.09e-10;3!UBERON:0000946;1.09e-10;3!UBERON:0001134;4.74e-08;16!UBERON:0002036;4.74e-08;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,3.16e-29,1;UBERON:0002135,4.20e-29,1;UBERON:0002081,2.37e-15,2;UBERON:0010227,2.37e-15,2;UBERON:0002133,2.74e-15,2;UBERON:0000948,2.61e-11,24;UBERON:0005498,2.61e-11,24;UBERON:0004140,2.61e-11,24;UBERON:0009881,2.61e-11,24;UBERON:0004141,2.61e-11,24;UBERON:0003084,2.61e-11,24;UBERON:0007005,2.61e-11,24;UBERON:0004139,2.61e-11,24;UBERON:0004291,2.61e-11,24;UBERON:0001723,7.42e-11,3;UBERON:0001033,7.42e-11,3;UBERON:0010056,7.42e-11,3;UBERON:0004151,1.09e-10,3;UBERON:0003978,1.20e-10,3;UBERON:0009751,1.20e-10,3;UBERON:0000946,1.20e-10,3;UBERON:0002523,1.20e-10,3;UBERON:0005983,1.20e-10,3;UBERON:0002165,1.20e-10,3;UBERON:0002062,1.20e-10,3;UBERON:0007280,1.20e-10,3;UBERON:0007100,3.93e-10,27;UBERON:0003103,3.87e-07,68 | |||
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|short_description=p4@SYNPO2L | |short_description=p4@SYNPO2L | ||
}} | }} |
Latest revision as of 07:31, 19 September 2015
Short description: | p4@SYNPO2L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SYNPO2L_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -44bp_to_ENST00000372873, NM_024875, uc001jus.3_5end |
EntrezGene: | SYNPO2L |
HGNC: | 23532 |
UniProt: | Q9H987 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 3.16e-29 | 1 |
mitral valve | 4.20e-29 | 1 |
cardiac atrium | 2.37e-15 | 2 |
future cardiac atrium | 2.37e-15 | 2 |
atrioventricular valve | 2.74e-15 | 2 |
heart | 2.61e-11 | 24 |
primitive heart tube | 2.61e-11 | 24 |
primary heart field | 2.61e-11 | 24 |
anterior lateral plate mesoderm | 2.61e-11 | 24 |
heart tube | 2.61e-11 | 24 |
heart primordium | 2.61e-11 | 24 |
cardiac mesoderm | 2.61e-11 | 24 |
cardiogenic plate | 2.61e-11 | 24 |
heart rudiment | 2.61e-11 | 24 |
tongue | 7.42e-11 | 3 |
gustatory system | 7.42e-11 | 3 |
future tongue | 7.42e-11 | 3 |
cardiac chamber | 1.09e-10 | 3 |
valve | 1.20e-10 | 3 |
cardiac mesenchyme | 1.20e-10 | 3 |
cardial valve | 1.20e-10 | 3 |
tunica intima | 1.20e-10 | 3 |
heart layer | 1.20e-10 | 3 |
endocardium | 1.20e-10 | 3 |
endocardial cushion | 1.20e-10 | 3 |
presumptive endocardium | 1.20e-10 | 3 |
primary circulatory organ | 3.93e-10 | 27 |
compound organ | 3.87e-07 | 68 |