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FFCP PHASE1:Mm9::chr12:119539843..119539899,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20688
|EntrezGene=20688
|HGNC=
|HGNC=
|MCL_coexpression_id=2774
|TSSclassifier=NA
|UniProt=Q62445,Q6DFV2
|UniProt=Q62445,Q6DFV2
|association_with_transcript=13bp_to_ENSMUST00000026367,NM_001166385,NM_009239,uc007pif.2,uc011yvt.1_5end
|association_with_transcript=13bp_to_ENSMUST00000026367,NM_001166385,NM_009239,uc007pif.2,uc011yvt.1_5end
|cluster_id=chr12:119539843..119539899,-
|description=CAGE_peak_1_at_Sp4_5end
|description=CAGE_peak_1_at_Sp4_5end
|id=chr12:119539843..119539899,-
|id=chr12:119539843..119539899,-
|ontology_enrichment_celltype=CL:0000117!2.08e-08!23;CL:0000337!2.08e-08!23
|ontology_enrichment_celltype=CL:0000117!2.08e-08!23;CL:0000337!2.08e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000117,2.06e-08,23;CL:0000337,2.06e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!7.79e-20!94;UBERON:0007811!1.40e-19!86;UBERON:0000033!1.07e-14!63;UBERON:0003056!5.93e-13!49;UBERON:0000955!3.61e-12!50;UBERON:0006238!3.61e-12!50;UBERON:0001049!8.75e-12!52;UBERON:0005068!8.75e-12!52;UBERON:0006241!8.75e-12!52;UBERON:0007135!8.75e-12!52;UBERON:0002616!1.31e-11!49;UBERON:0002346!1.39e-10!71;UBERON:0003075!1.39e-10!71;UBERON:0007284!1.39e-10!71;UBERON:0002020!1.87e-10!34;UBERON:0003080!3.49e-10!40;UBERON:0002780!7.52e-10!39;UBERON:0001890!7.52e-10!39;UBERON:0006240!7.52e-10!39;UBERON:0002791!1.53e-09!29;UBERON:0003528!1.53e-09!29;UBERON:0001893!1.53e-09!29;UBERON:0001017!1.98e-09!73;UBERON:0005743!1.98e-09!73;UBERON:0000477!7.79e-09!154;UBERON:0000073!1.64e-08!75;UBERON:0001016!1.64e-08!75;UBERON:0000475!1.91e-07!200
|ontology_enrichment_uberon_v019_2=UBERON:0002346,9.43e-14,64;UBERON:0003075,9.43e-14,64;UBERON:0007284,9.43e-14,64;UBERON:0003056,5.83e-13,49;UBERON:0000073,1.17e-12,54;UBERON:0001049,8.62e-12,52;UBERON:0005068,8.62e-12,52;UBERON:0006241,8.62e-12,52;UBERON:0007135,8.62e-12,52;UBERON:0000955,5.79e-11,47;UBERON:0006238,5.79e-11,47;UBERON:0010371,1.02e-10,73;UBERON:0002020,1.85e-10,34;UBERON:0002616,2.03e-10,46;UBERON:0003080,3.45e-10,40;UBERON:0010314,5.44e-10,92;UBERON:0002780,7.43e-10,39;UBERON:0001890,7.43e-10,39;UBERON:0006240,7.43e-10,39;UBERON:0003528,1.51e-09,29;UBERON:0002791,1.51e-09,29;UBERON:0001893,1.51e-09,29;UBERON:0001017,1.65e-09,73;UBERON:0001016,1.39e-08,75;UBERON:0004121,2.11e-08,95;UBERON:0000924,2.11e-08,95;UBERON:0006601,2.11e-08,95;UBERON:0007811,3.23e-07,36;UBERON:0000153,8.59e-07,43
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962614,2.4853572523477,0.56369293868419,3.28936401296753,2.31641886639937,4.66682852025714,2.71235629303235,2.53434188236167,3.40335992072686,4.55715346953825,5.13810787685983,2.65742532908607,2.01621004380506,10.4283669807299,3.64905387522296,3.3894615864393,4.54722880422283,6.26593434836185,7.9472541912506,10.0964177596774,13.8828155544103,10.1976114447629,11.812055031525,11.998316031284,14.3263084687436,15.1052591375317,17.4146584250538,5.21479882314986,3.10780334723691,3.49884040776955,1.34307693091263,3.28422309854724,2.25218970541418,4.2124873581471,1.07184189539533,2.00628841614145,8.471277639256,10.5874804396651,10.3121192419091,6.53042092906013,10.2762377965596,7.55393897389701,16.2005400055633,15.7612421128477,8.15656336171568,8.28416498802912,3.94391920819871,7.18244772121856,4.60980735536162,3.64660075602441,6.07878171621149,3.30918315210025,5.33392146723877,4.94484137373346,4.49286893428541,4.04315538822076,3.29523089857312,5.09291121742406,5.99305647807247,4.92993673517493,5.57124048869449,4.76293691283074,5.2147946675185,5.40145817298374,3.70877310722976,3.82717192349433,5.48590803816665,4.2594193478241,5.24559617884106,3.34296758254356,5.36423468367385,4.23073039458383,4.39027134894654,4.20911538300549,4.07412341537585,3.92799590160417,4.27086065247027,4.13718825977367,4.91077251803627,3.56354734727722,3.47231899766054,4.24677982494508,3.97683734357194,5.58664740525576,3.06061331310149,3.08827986767322,4.63735671240843
|phase1_expression=4.32401887182944,3.48975407639361,1.36499771816861,2.11724947914781,2.00358291978539,1.51091344720701,0.934450562382103,18.7228818990286,15.627548158835,10.5329036844897,4.62288514208863,5.34473465268754,23.1120985407128,22.1173618120063,6.32908547449759,9.51633756732182,9.79386629379405,17.192688012024,14.3970155286026,9.76096199135469,5.86798702042381,2.78014663362479,2.87319768052829,1.11994695955385,1.14704640533585,1.14846392823004,0.86152399231815,0.861884930743556,0.380046838912748,1.00812051903972,0.443461021310609,1.27006134691926,1.84519436275371,0,1.44425809875637,0.332469290716985,1.42918549383658,7.95210098400125,7.0320181007142,7.32933241563318,9.99993529652724,6.14740936462601,10.6812277666854,0.503587271902309,0.811015449756117,0,3.12956537739216,2.8343270329458,1.5378032791413,1.36100929351998,1.1198913730029,0,13.5903910906766,24.6623128283857,27.8957853288245,2.82985379639542,1.71920063963254,3.09403255366465,7.89034197352431,13.7537654610729,4.43681982454325,0,1.77858959222228,0.899899717281399,0,2.1314403448383,0,1.53687322128622,7.15458324928496,8.6403800532282,6.09942387919008,4.28476476605705,5.52171352379034,10.1667363348412,7.76348315247715,10.1114066527102,8.8092704799511,9.83192503255945,9.36999852863085,10.9465618816061,10.7955419450843,11.9810075228055,5.862842979029,10.1297269805702,8.40390362772456,9.1334861496837,8.25755748634797,7.08317894136142,1.28734528666413,1.88928900266964,4.34796733052517,0.860423876981386,2.03991400112325,1.07940638327563,1.29955283489534,0.896053774194671,3.08977724289854,2.21559419351475,0.779358013808606,1.41335829804136,5.91542363062058,1.28326477414318,0,0,0.216491041011214,0.760079596425296,0.505524445014783,4.5673551887624,29.5189187357776,4.89859058913922,1.04091196059682,1.82679286987285,2.07553947530453,1.80867168663147,3.17489509266403,1.63366568728578,1.48316980640624,4.916378135277,9.73071607144862,4.36770494858005,3.75430581382669,5.33362778448744,1.86391761218122,15.517382241612,11.9384622883669,4.34276993854605,4.07371423320129,1.19980546198682,3.81210681219194,8.08869452786043,9.15001205637253,8.54449594367478,6.77914848749878,7.67146371990992,6.44142938134636,6.65189178577806,3.05518091550949,2.86136032403214,5.81262344397452,10.3116509384372,4.29397461776922,3.90833577536904,7.74267158163002,9.0422890701429,10.4095843701532,12.2989171473456,10.4008914261299,11.9003550539947,4.74249584452253,6.42960672570586,6.33424046990216,2.6303487891309,5.28289773528636,4.87553033131033,1.4404749548556,2.7864797354589,2.80885274925294,0.772043721344145,2.27330799516474,3.93538967817454,4.69052119962192,5.04173772090842,5.68187365404505,5.70616272067471,4.62801338662135,4.88321283975857,5.36546802799238,5.13767506415546,3.45575684818309,3.447516745661,4.05344047729279,3.80119967305864,4.39100230582101,5.2340503316545,7.36014819974445,7.40913209130848,3.30418782983798,1.05780226665418,5.11891801284562,4.18026009348789,4.51036114627327,3.22693639397348,2.89091456998331,3.04361001780095,2.37264530772256,2.30578536613615,2.01068167040216,3.78017296878187,2.53453313254856,3.59527763461689,2.37751854862164,1.7922714592893,2.0863469104839,3.65595240351132,6.76246414038483,3.46207257337034,3.87904974335251,3.92760591385784,4.93244989569207,4.72352473534727,2.04098346193787,3.82531208157582,0.592905254174298,3.67059232575407,3.93117990226406,4.49724224769707,6.8972441272091,5.788251834058,2.29163266603278,2.01387296215567,3.24270453550071,0.823684239564244,11.5014565221884,2.23284568601102,0.936113019343682,1.51547326768267,1.4351793081753,2.41221760681684,7.39012760666419,3.03186258832776,4.23708938749267,4.07388205860452,4.45911471748154,5.69521275302174,5.95109102215034,4.68320754858717,5.2019597555043,4.4292937929755,5.42146213435456,6.71839590334526,5.35323443784276,6.94315481191256,1.50791283939272,0,0.983528546038072,1.65562047782839,5.13761887960934,4.68846746368813,0.655739781506702,3.53459298086122,1.89304931649754,2.73307121007647,5.81643173878557,1.67278158566786,5.34716817797746,3.11384183867716,4.04810701674894,3.21481443702443,4.34816555741176,15.1021018718249,3.97432238583152,1.24645922567079,4.0721739838394,5.77395430403874,5.30980553359851,1.94224508923985,2.11626489875326,4.14931175462976,0.885905678642318,1.84461088766356,3.35956781118687,2.54473610634254,2.85197902707777,3.47640433729398,0,2.06271086496374,13.6175842301515,4.68158844481407,2.32845630808958,4.92975180572662,7.44828981297549,6.59964625127661,5.10101963866575,2.74018454203139,0.704015124191131,1.69465656691056,2.42581237860458,5.11147384118588,2.9063596805263,2.35220407219808,2.14870219205646,1.31312719796049,2.04036585640896,8.15871328846243,9.22702756308404,5.77883230297023,5.00025223898222,7.91147519419702,7.79157098009843,6.40578884978263,9.17883521966819,11.47601909054,8.84479832348312,1.90934123603023,4.58687190692646,3.45643094115643,3.02414954301044,3.97267762427491,3.27543845619266,3.37160865962052,4.05001933054146,1.57053565190418,1.16653475962614,2.4853572523477,0.56369293868419,3.28936401296753,2.31641886639937,4.66682852025714,2.71235629303235,2.53434188236167,3.40335992072686,4.55715346953825,5.13810787685983,2.65742532908607,2.01621004380506,10.4283669807299,3.64905387522296,3.3894615864393,4.54722880422283,6.26593434836185,7.9472541912506,10.0964177596774,13.8828155544103,10.1976114447629,11.812055031525,11.998316031284,14.3263084687436,15.1052591375317,17.4146584250538,5.21479882314986,3.10780334723691,3.49884040776955,1.34307693091263,3.28422309854724,2.25218970541418,4.2124873581471,1.07184189539533,2.00628841614145,8.471277639256,10.5874804396651,10.3121192419091,6.53042092906013,10.2762377965596,7.55393897389701,16.2005400055633,15.7612421128477,8.15656336171568,8.28416498802912,3.94391920819871,7.18244772121856,4.60980735536162,3.64660075602441,6.07878171621149,3.30918315210025,5.33392146723877,4.94484137373346,4.49286893428541,4.04315538822076,3.29523089857312,5.09291121742406,5.99305647807247,4.92993673517493,5.57124048869449,4.76293691283074,5.2147946675185,5.40145817298374,3.70877310722976,3.82717192349433,5.48590803816665,4.2594193478241,5.24559617884106,3.34296758254356,5.36423468367385,4.23073039458383,4.39027134894654,4.20911538300549,4.07412341537585,3.92799590160417,4.27086065247027,4.13718825977367,4.91077251803627,3.56354734727722,3.47231899766054,4.24677982494508,3.97683734357194,5.58664740525576,3.06061331310149,3.08827986767322,4.63735671240843
|short_description=p1@Sp4
|short_description=p1@Sp4
}}
}}

Latest revision as of 10:49, 26 September 2015

Short description:p1@Sp4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Sp4_5end
Coexpression cluster:MCL_coexpression_mm9:2774
Association with transcript: 13bp_to_ENSMUST00000026367, NM_001166385, NM_009239, uc007pif.2, uc011yvt.1_5end
EntrezGene:Sp4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Sp4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.12
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E918.72
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E715.63
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F210.53
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.62
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F15.34
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E423.11
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E822.12
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A16.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A39.52
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A59.79
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A217.19
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A414.40
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A69.76
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.78
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.87
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G87.95
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H17.03
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H37.33
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G910.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.15
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H410.68
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.83
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A213.59
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I924.66
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A127.90
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.83
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C37.89
Mouse Granule cells, donor2.CNhs12357.11731-123E313.75
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.15
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.64
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.52
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D210.17
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.76
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D610.11
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.83
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.37
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.95
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.80
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.98
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.86
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.40
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.13
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.26
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.08
Mouse Schwann, donor1.CNhs12507.11728-123D91.29
Mouse Schwann, donor2.CNhs12573.11746-123F91.89
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.09
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.22
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.92
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.57
accessory axillary lymph node, adult.CNhs10475.1063-29H929.52
adrenal gland, adult.CNhs10508.49-24D74.90
adrenal gland, embryo E14.CNhs11038.406-44C51.04
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I12.08
adrenal gland, embryo E18.CNhs11026.1262-18F51.81
adrenal gland, neonate N00.CNhs11191.1311-23C13.17
adrenal gland, neonate N25.CNhs11223.1377-27I31.63
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H14.92
bone (os femoris), adult.CNhs10483.56-12G29.73
bone (os femoris), neonate N02.CNhs11227.1985-43F54.37
bone (os femoris), neonate N16.CNhs11225.1525-43A63.75
bone (os femoris), neonate N20.CNhs11195.1350-25C35.33
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B215.52
cerebellum, neonate N30.CNhs11135.1395-42I211.94
colon, adult.CNhs10468.36-18H74.34
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.07
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.81
corpora quadrigemina, adult.CNhs10501.16-22A48.09
corpus striatum, adult.CNhs10487.19-21D89.15
corpus striatum, neonate N00.CNhs11226.630-43F18.54
cortex, adult.CNhs10473.12-14D56.78
cortex, neonate N30.CNhs11107.1392-42F27.67
diencephalon, adult.CNhs10482.20-12F26.44
diencephalon, neonate N30.CNhs11201.1388-42B26.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.06
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.86
epididymis, adult.CNhs10490.58-23B25.81
eyeball, adult.CNhs10484.31-12G410.31
eyeball, embryo E12.CNhs11016.345-16C64.29
eyeball, embryo E14.CNhs10521.399-16E23.91
eyeball, embryo E15.CNhs10593.426-16C97.74
eyeball, embryo E17.CNhs11023.1261-18D49.04
eyeball, neonate N00.CNhs11207.633-15C610.41
eyeball, neonate N01.CNhs11140.1532-43E712.30
eyeball, neonate N02.CNhs11205.1551-44G810.40
eyeball, neonate N16.CNhs11188.777-19A211.90
forelimb, embryo E11.CNhs10596.335-25E24.74
forelimb, embryo E12.CNhs10600.359-14H26.43
forelimb, embryo E13.CNhs10589.384-1E26.33
forelimb, embryo E14.CNhs10577.413-26A82.63
forelimb, embryo E15.CNhs11007.437-20E75.28
forelimb, embryo E17.CNhs10598.1517-43C44.88
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I62.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E93.94
heart, embryo E12.CNhs11015.353-12F54.69
heart, embryo E13.CNhs11013.376-3I95.04
heart, embryo E14.CNhs10597.403-26D45.68
heart, embryo E15.CNhs11017.431-16C85.71
heart, embryo E16.CNhs11021.457-17C64.63
heart, embryo E17.CNhs11025.479-18E54.88
heart, embryo E18.CNhs11030.1283-20G35.37
heart, neonate N00.CNhs11213.639-21E35.14
heart, neonate N03.CNhs11221.1349-25I23.46
heart, neonate N10.CNhs11118.749-24G13.45
heart, neonate N16.CNhs11209.782-15G14.05
heart, neonate N20.CNhs11127.821-26I63.80
heart, neonate N25.CNhs11196.1351-25D34.39
heart, neonate N30.CNhs11202.1390-42D25.23
hippocampus, adult.CNhs10478.13-16E87.36
hippocampus, neonate N00.CNhs11228.627-43G17.41
intestinal mucosa, adult.CNhs10506.860-29I33.30
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I55.12
intestine, embryo E13.CNhs11010.381-16D54.18
intestine, embryo E15.CNhs10602.976-16D84.51
intestine, embryo E16.CNhs10585.463-22H43.23
intestine, embryo E17.CNhs10582.482-18D32.89
intestine, embryo E18.CNhs10526.1289-20F73.04
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E92.31
intestine, neonate N06.CNhs11102.688-20B82.01
intestine, neonate N07.CNhs11095.720-20F23.78
intestine, neonate N10.CNhs11098.755-23A52.53
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E32.38
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I92.09
kidney, embryo E15.CNhs10997.434-16F83.66
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I23.46
kidney, embryo E18.CNhs11001.1288-20C73.88
kidney, neonate N00.CNhs11214.646-21G73.93
kidney, neonate N10.CNhs11206.758-6D54.93
kidney, neonate N20.CNhs11113.832-19I14.72
kidney, neonate N25.CNhs11122.1353-25F32.04
kidney, neonate N30.CNhs11203.1385-42H13.83
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F83.67
liver, embryo E13.CNhs10524.378-3H63.93
liver, embryo E14.CNhs10594.409-16E14.50
liver, embryo E15.CNhs10520.433-16D76.90
liver, embryo E16.CNhs10523.462-17F55.79
liver, embryo E17.CNhs10510.481-18A32.29
liver, embryo E18.CNhs10579.499-43G42.01
liver, neonate N00.CNhs11117.641-24F43.24
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A811.50
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H11.44
liver, neonate N30.CNhs11106.1382-42D12.41
lung, adult.CNhs10474.28-22B17.39
lung, embryo E12.CNhs10522.354-16G23.03
lung, embryo E14.CNhs10604.404-26F84.24
lung, embryo E15.CNhs11020.432-17C54.07
lung, embryo E16.CNhs10998.458-17B64.46
lung, embryo E17.CNhs10605.480-44A65.70
lung, embryo E18.CNhs10583.1287-20I65.95
lung, neonate N00.CNhs11224.640-42C64.68
lung, neonate N06.CNhs11212.683-20E55.20
lung, neonate N07.CNhs11111.715-19A34.43
lung, neonate N10.CNhs11219.750-23E65.42
lung, neonate N20.CNhs11109.822-18A46.72
lung, neonate N25.CNhs11119.1359-25C75.35
lung, neonate N30.CNhs11133.1394-42H26.94
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C25.14
medulla oblongata, neonate N30.CNhs11200.1396-42A34.69
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.53
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.82
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.35
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.11
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I915.10
ovary, adult.CNhs10507.91-2I73.97
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I44.07
oviduct, adult pregnant day01.CNhs10500.988-6G65.77
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E54.15
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G93.36
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B63.48
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G813.62
pituitary gland, embryo E12.CNhs11018.346-16E64.68
pituitary gland, embryo E13.CNhs11009.370-44C72.33
pituitary gland, embryo E14.CNhs11037.398-44A54.93
pituitary gland, embryo E15.CNhs10592.427-16B97.45
pituitary gland, embryo E16.CNhs11036.449-43F66.60
pituitary gland, embryo E17.CNhs11039.1265-44F55.10
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G31.69
prostate, adult.CNhs10470.859-1F82.43
skin, adult.CNhs10492.30-1C35.11
skin, neonate N00.CNhs11124.650-25G42.91
skin, neonate N03.CNhs11215.662-22H32.35
skin, neonate N06.CNhs11097.693-20I52.15
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C98.16
spleen, adult.CNhs10465.25-2G29.23
spleen, embryo E16.CNhs11035.461-43C15.78
spleen, embryo E18.CNhs11011.1271-21F25.00
spleen, neonate N10.CNhs11116.752-24D17.91
spleen, neonate N20.CNhs11112.824-19H17.79
spleen, neonate N25.CNhs11099.1354-25G36.41
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C69.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C911.48
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D38.84
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E34.59
stomach, embryo E15.CNhs10603.1252-16G83.46
stomach, embryo E16.CNhs11022.459-17D43.02
stomach, embryo E17.CNhs11006.1035-18D53.97
stomach, embryo E18.CNhs10999.1286-20C63.28
stomach, neonate N03.CNhs11193.1340-24B83.37
stomach, neonate N07.CNhs11210.718-18A94.05
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I11.17
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F53.29
testis, embryo E15.CNhs11034.443-27C52.32
testis, embryo E16.CNhs11033.470-26G54.67
testis, embryo E17.CNhs11029.486-18I52.71
testis, embryo E18.CNhs11027.503-18G52.53
testis, neonate N00.CNhs11189.1300-22B73.40
testis, neonate N07.CNhs11222.726-26I44.56
testis, neonate N10.CNhs11204.763-44D95.14
testis, neonate N20.CNhs11110.839-18H32.66
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B510.43
thymus, embryo E14.CNhs11041.402-44I43.65
thymus, embryo E15.CNhs11005.430-45I23.39
thymus, embryo E16.CNhs11002.456-26C54.55
thymus, embryo E17.CNhs10581.478-18C16.27
thymus, embryo E18.CNhs10595.1273-19G47.95
thymus, neonate N02.CNhs11181.1541-43F810.10
thymus, neonate N03.CNhs11137.2104-43C713.88
thymus, neonate N06.CNhs11197.681-26C410.20
thymus, neonate N07.CNhs11211.713-19D311.81
thymus, neonate N10.CNhs11194.748-24E412.00
thymus, neonate N20.CNhs11186.820-7A214.33
thymus, neonate N25.CNhs11125.1362-25G715.11
thymus, neonate N30.CNhs11132.1393-42G217.41
tongue, adult.CNhs10499.32-1B45.21
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.50
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.34
urinary bladder, adult.CNhs10481.879-12E43.28
uterus, adult pregnant day19.CNhs10497.590-15F52.25
uterus, adult.CNhs10509.92-27E54.21
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A18.47
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A210.59
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.31
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.53
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.28
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A616.20
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A715.76
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.16
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.28
whole body, embryo E11.CNhs11014.324-5I83.94
whole body, embryo E12.CNhs10587.857-27C97.18
whole body, embryo E13.CNhs10512.372-23H24.61
whole body, embryo E14.5.CNhs10578.420-27D23.65
whole body, embryo E14.CNhs10519.395-14B16.08
whole body, embryo E16.CNhs10514.453-14F23.31
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.04
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.09
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.99
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.93
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.21
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.40
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.83
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.26
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.25
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.23
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.07
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.27
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.14
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.56
whole body, embryo E17.5.CNhs10513.490-9F93.47
whole body, embryo E17.CNhs10517.475-3I54.25
whole body, embryo E18.CNhs10516.493-3B33.98
whole body, neonate N00.CNhs10525.657-19C25.59
whole body, neonate N01.CNhs10576.659-23C63.06
whole body, neonate N06.CNhs10515.692-21D13.09
whole body, neonate N10.CNhs10518.761-6B44.64





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.06e-0823
neuroblast (sensu Vertebrata)2.06e-0823

Uber anatomy
Ontology termp-valuen
neurectoderm9.43e-1464
neural plate9.43e-1464
presumptive neural plate9.43e-1464
pre-chordal neural plate5.83e-1349
regional part of nervous system1.17e-1254
neural tube8.62e-1252
neural rod8.62e-1252
future spinal cord8.62e-1252
neural keel8.62e-1252
brain5.79e-1147
future brain5.79e-1147
ecto-epithelium1.02e-1073
gray matter1.85e-1034
regional part of brain2.03e-1046
anterior neural tube3.45e-1040
structure with developmental contribution from neural crest5.44e-1092
regional part of forebrain7.43e-1039
forebrain7.43e-1039
future forebrain7.43e-1039
brain grey matter1.51e-0929
regional part of telencephalon1.51e-0929
telencephalon1.51e-0929
central nervous system1.65e-0973
nervous system1.39e-0875
ectoderm-derived structure2.11e-0895
ectoderm2.11e-0895
presumptive ectoderm2.11e-0895
craniocervical region3.23e-0736
anterior region of body8.59e-0743
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