FFCP PHASE1:Hg19::chr11:112508058..112508069,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:112508058..112508069,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_at_chr11:112508058..112508069,+ | |description=CAGE_peak_at_chr11:112508058..112508069,+ | ||
|id=chr11:112508058..112508069,+ | |id=chr11:112508058..112508069,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;9.73e-46;3!UBERON:0003057;9.73e-46;3!UBERON:0005425;1.78e-16;1!UBERON:0006601;1.13e-09;82!UBERON:0010122;4.18e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.22e-110!57;UBERON:0005068!3.22e-110!57;UBERON:0006241!3.22e-110!57;UBERON:0007135!3.22e-110!57;UBERON:0002616!9.07e-89!59;UBERON:0000955!3.49e-83!69;UBERON:0006238!3.49e-83!69;UBERON:0001017!2.23e-82!82;UBERON:0002780!2.53e-81!41;UBERON:0001890!2.53e-81!41;UBERON:0006240!2.53e-81!41;UBERON:0003080!2.76e-79!42;UBERON:0005743!2.73e-78!86;UBERON:0002020!8.68e-78!34;UBERON:0003528!8.68e-78!34;UBERON:0001893!9.28e-78!34;UBERON:0000073!2.37e-74!94;UBERON:0001016!2.37e-74!94;UBERON:0002791!8.93e-74!33;UBERON:0003075!5.41e-71!86;UBERON:0007284!5.41e-71!86;UBERON:0001869!3.99e-69!32;UBERON:0002346!1.53e-67!90;UBERON:0007023!1.80e-61!115;UBERON:0003056!4.75e-53!61;UBERON:0000033!1.56e-49!123;UBERON:0002619!2.10e-47!22;UBERON:0000153!6.47e-47!129;UBERON:0007811!6.47e-47!129;UBERON:0001950!1.62e-45!20;UBERON:0002308!3.30e-42!9;UBERON:0000125!3.30e-42!9;UBERON:0002420!5.07e-42!9;UBERON:0007245!5.07e-42!9;UBERON:0010009!5.07e-42!9;UBERON:0010011!5.07e-42!9;UBERON:0000454!5.07e-42!9;UBERON:0000956!1.62e-41!25;UBERON:0000203!1.62e-41!25;UBERON:0004121!1.00e-40!169;UBERON:0000924!1.27e-39!173;UBERON:0006601!1.27e-39!173;UBERON:0009663!2.90e-33!7;UBERON:0003076!3.13e-30!15;UBERON:0003057!3.13e-30!15;UBERON:0002298!9.28e-29!8;UBERON:0000025!1.87e-27!194;UBERON:0004732!2.91e-22!13;UBERON:0004111!5.33e-22!241;UBERON:0001871!2.22e-20!7;UBERON:0000369!2.90e-19!4;UBERON:0002435!2.90e-19!4;UBERON:0000204!2.90e-19!4;UBERON:0010082!2.90e-19!4;UBERON:0000200!4.27e-19!6;UBERON:0000477!1.37e-18!286;UBERON:0004733!1.77e-18!12;UBERON:0002028!1.77e-18!12;UBERON:0007277!1.77e-18!12;UBERON:0000064!4.74e-16!219;UBERON:0002240!1.01e-15!3;UBERON:0000349!1.37e-15!5;UBERON:0006331!2.43e-15!3;UBERON:0001896!2.67e-15!3;UBERON:0005290!2.67e-15!3;UBERON:0010096!2.67e-15!3;UBERON:0005383!6.32e-15!3;UBERON:0005382!6.32e-15!3;UBERON:0001872!6.54e-15!5;UBERON:0000475!7.82e-15!365;UBERON:0000988!8.01e-15!3;UBERON:0002771!1.55e-14!3;UBERON:0000483!2.20e-14!309;UBERON:0000119!3.60e-14!312;UBERON:0001875!4.02e-11!2;UBERON:0006514!4.02e-11!2;UBERON:0005162!4.22e-11!2;UBERON:0000122!4.22e-11!2;UBERON:0001897!8.78e-11!2;UBERON:0002148!1.12e-10!2;UBERON:0009662!1.12e-10!2;UBERON:0001876!1.72e-10!2;UBERON:0001873!1.72e-10!2;UBERON:0010122!1.72e-10!2;UBERON:0005174!1.30e-09!5;UBERON:0001137!1.30e-09!5;UBERON:0000062!5.25e-09!511;UBERON:0002021!8.73e-09!5;UBERON:0002680!2.02e-08!9;UBERON:0001895!2.02e-08!9;UBERON:0010092!2.02e-08!9;UBERON:0001894!9.29e-07!7;UBERON:0006222!9.29e-07!7;UBERON:0000481!9.47e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;9.73e-46;3!UBERON:0005174;9.73e-46;3!UBERON:0001137;9.73e-46;3!UBERON:0000125;2.32e-42;9!UBERON:0002308;2.32e-42;9!UBERON:0009663;2.68e-35;7!UBERON:0001875;1.08e-31;2!UBERON:0006514;1.08e-31;2!UBERON:0005162;1.60e-31;2!UBERON:0000122;1.60e-31;2!UBERON:0002420;1.45e-27;9!UBERON:0007245;1.45e-27;9!UBERON:0010009;1.45e-27;9!UBERON:0010011;1.45e-27;9!UBERON:0000454;1.45e-27;9!UBERON:0002336;7.00e-17;1!UBERON:0011215;7.00e-17;1!UBERON:0001018;7.00e-17;1!UBERON:0002473;7.00e-17;1!UBERON:0005340;7.00e-17;1!UBERON:0003544;7.00e-17;1!UBERON:0005970;7.00e-17;1!UBERON:0002316;7.00e-17;1!UBERON:0001020;7.00e-17;1!UBERON:0002437;7.00e-17;1!UBERON:0002038;1.78e-16;1!UBERON:0000941;1.78e-16;1!UBERON:0001785;1.78e-16;1!UBERON:0002464;1.78e-16;1!UBERON:0004904;1.78e-16;1!UBERON:0001021;1.78e-16;1!UBERON:0009661;1.78e-16;1!UBERON:0002950;1.78e-16;1!UBERON:0001891;1.78e-16;1!UBERON:0002780;2.84e-16;41!UBERON:0001890;2.84e-16;41!UBERON:0000073;2.42e-13;53!UBERON:0002616;2.42e-13;53!UBERON:0001016;5.77e-13;83!UBERON:0001017;1.90e-12;75!UBERON:0001893;2.22e-12;34!UBERON:0003528;1.06e-11;34!UBERON:0002020;1.06e-11;34!UBERON:0004732;3.38e-11;13!UBERON:0002298;3.39e-11;6!UBERON:0002791;9.57e-11;32!UBERON:0001897;4.18e-09;2!UBERON:0001873;4.18e-09;2!UBERON:0010225;4.18e-09;2!UBERON:0001954;6.67e-09;2!UBERON:0002148;6.67e-09;2!UBERON:0003714;6.67e-09;2!UBERON:0006331;6.67e-09;2!UBERON:0009662;6.67e-09;2!UBERON:0003022;6.67e-09;2!UBERON:0002421;6.67e-09;2!UBERON:0002600;6.67e-09;2!UBERON:0007023;1.40e-08;114!UBERON:0001869;1.67e-07;32!UBERON:0000955;8.03e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,4.87e-46,3;UBERON:0005174,4.87e-46,3;UBERON:0001137,4.87e-46,3;UBERON:0000125,3.27e-42,9;UBERON:0002308,3.27e-42,9;UBERON:0001049,1.95e-37,56;UBERON:0005068,1.95e-37,56;UBERON:0006241,1.95e-37,56;UBERON:0007135,1.95e-37,56;UBERON:0009663,2.81e-35,7;UBERON:0001875,1.60e-31,2;UBERON:0006514,1.60e-31,2;UBERON:0005162,1.87e-31,2;UBERON:0000122,1.87e-31,2;UBERON:0003075,5.79e-30,82;UBERON:0007284,5.79e-30,82;UBERON:0002346,1.52e-28,86;UBERON:0002420,1.50e-27,9;UBERON:0007245,1.50e-27,9;UBERON:0010009,1.50e-27,9;UBERON:0010011,1.50e-27,9;UBERON:0000454,1.50e-27,9;UBERON:0001016,6.10e-27,89;UBERON:0001017,1.98e-25,81;UBERON:0003076,2.26e-25,15;UBERON:0003057,2.26e-25,15;UBERON:0010371,1.74e-23,104;UBERON:0000073,3.63e-22,53;UBERON:0002616,3.63e-22,53;UBERON:0010314,2.49e-18,132;UBERON:0007023,2.91e-18,114;UBERON:0002780,1.87e-17,41;UBERON:0001890,1.87e-17,41;UBERON:0003080,1.87e-17,41;UBERON:0006240,1.87e-17,41;UBERON:0000955,6.15e-17,68;UBERON:0006238,6.15e-17,68;UBERON:0002336,8.86e-17,1;UBERON:0011215,8.86e-17,1;UBERON:0001018,8.86e-17,1;UBERON:0002473,8.86e-17,1;UBERON:0005340,8.86e-17,1;UBERON:0003544,8.86e-17,1;UBERON:0005970,8.86e-17,1;UBERON:0002316,8.86e-17,1;UBERON:0001020,8.86e-17,1;UBERON:0002437,8.86e-17,1;UBERON:0002038,1.41e-16,1;UBERON:0009661,1.41e-16,1;UBERON:0002950,1.41e-16,1;UBERON:0001891,1.41e-16,1;UBERON:0009616,1.41e-16,1;UBERON:0010286,1.41e-16,1;UBERON:0000941,1.65e-16,1;UBERON:0001785,1.65e-16,1;UBERON:0002464,1.65e-16,1;UBERON:0004904,1.65e-16,1;UBERON:0001021,1.65e-16,1;UBERON:0003902,1.65e-16,1;UBERON:0005425,1.65e-16,1;UBERON:0001893,1.53e-15,34;UBERON:0003528,1.88e-15,34;UBERON:0002020,1.88e-15,34;UBERON:0003056,3.49e-15,61;UBERON:0004121,9.36e-14,171;UBERON:0000924,9.36e-14,171;UBERON:0006601,9.36e-14,171;UBERON:0002791,1.25e-11,32;UBERON:0004732,3.56e-11,13;UBERON:0002298,3.75e-11,6;UBERON:0000025,2.51e-10,192;UBERON:0011216,2.85e-10,223;UBERON:0001873,4.02e-09,2;UBERON:0010122,4.02e-09,2;UBERON:0001897,4.34e-09,2;UBERON:0010225,4.34e-09,2;UBERON:0003714,6.42e-09,2;UBERON:0001954,6.94e-09,2;UBERON:0003022,6.94e-09,2;UBERON:0002421,6.94e-09,2;UBERON:0002600,6.94e-09,2;UBERON:0002148,8.74e-09,2;UBERON:0006331,8.74e-09,2;UBERON:0009662,8.74e-09,2;UBERON:0004111,5.01e-08,240;UBERON:0001869,9.96e-08,32;UBERON:0000483,2.91e-07,306;UBERON:0000119,3.52e-07,309 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.371072392647405,0,0,0,0,0,0,0,0,0,0,2.65722415744152,0.241192877250816,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56124305326573,0,0.937057782901357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.20294202096853,1.09524303113594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36203406111576,0,0,0,0,0,0.425246896606173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0342636508924,0.92562821219883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.876336514945499,2.86704597845036,0.776503360757966,0.993542447062135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.834979926253974,0,0.957803154342908,0.205116364240755,0,0.553258019713743,0.968853873791107,1.42769420259154,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0.607838261565552,0.781078098613847,0.620060389503552,0.507326481551255,0,0,0,0,0,0,0,0,0,0,0,0,0.543757863814654,0.72350050919134,0,0,0,0.942693539496011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96308467114945,1.78227840196252,1.2679671827502,0,0,0,0,0,0,0,0,0,1.43339583151451,0,0.475940431336403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,2.58582489654738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.371072392647405,0,0,0,0,0,0,0,0,0,0,2.65722415744152,0.241192877250816,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56124305326573,0,0.937057782901357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.20294202096853,1.09524303113594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36203406111576,0,0,0,0,0,0.425246896606173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0342636508924,0.92562821219883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.876336514945499,2.86704597845036,0.776503360757966,0.993542447062135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.834979926253974,0,0.957803154342908,0.205116364240755,0,0.553258019713743,0.968853873791107,1.42769420259154,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0.607838261565552,0.781078098613847,0.620060389503552,0.507326481551255,0,0,0,0,0,0,0,0,0,0,0,0,0.543757863814654,0.72350050919134,0,0,0,0.942693539496011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96308467114945,1.78227840196252,1.2679671827502,0,0,0,0,0,0,0,0,0,1.43339583151451,0,0.475940431336403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,2.58582489654738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:112508058..112508069,+ | |short_description=p@chr11:112508058..112508069,+ | ||
}} | }} |
Latest revision as of 18:15, 23 July 2015
Short description: | p@chr11:112508058..112508069, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:112508058..112508069, + |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data