FFCP PHASE1:Hg19::chr11:116700754..116700763,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:116700754..116700763,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr11:116700754..116700763,+ | |description=CAGE_peak_at_chr11:116700754..116700763,+ | ||
|id=chr11:116700754..116700763,+ | |id=chr11:116700754..116700763,+ | ||
|ontology_enrichment_celltype=CL:0000181!6.43e-26!12;CL:0000417!6.43e-26!12;CL:0000668!6.43e-26!12;CL:0000414!6.43e-26!12;CL:0000412!6.43e-26!12;CL:0000182!6.43e-26!12;CL:0002563!2.84e-13!4;CL:0000223!1.25e-12!59;CL:0002535!1.36e-07!2;CL:0002253!2.12e-07!2 | |ontology_enrichment_celltype=CL:0000181!6.43e-26!12;CL:0000417!6.43e-26!12;CL:0000668!6.43e-26!12;CL:0000414!6.43e-26!12;CL:0000412!6.43e-26!12;CL:0000182!6.43e-26!12;CL:0002563!2.84e-13!4;CL:0000223!1.25e-12!59;CL:0002535!1.36e-07!2;CL:0002253!2.12e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002535;2.55e-15;2!CL:0000182;1.60e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,2.74e-15,2;CL:0000182,1.60e-10,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.76e-11;11!UBERON:0009497;1.06e-09;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;6.58e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,6.77e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002107!1.14e-31!19;UBERON:0006925!1.14e-31!19;UBERON:0008836!1.14e-31!19;UBERON:0008835!2.72e-27!22;UBERON:0003894!2.72e-27!22;UBERON:0009854!4.36e-26!23;UBERON:0007499!5.80e-24!25;UBERON:0009497!5.80e-24!25;UBERON:0000015!5.80e-24!25;UBERON:0002423!5.80e-24!25;UBERON:0006235!5.80e-24!25;UBERON:0004161!5.80e-24!25;UBERON:0005057!5.04e-23!26;UBERON:0009856!5.04e-23!26;UBERON:0003929!8.17e-22!54;UBERON:0002365!3.12e-19!31;UBERON:0002330!3.12e-19!31;UBERON:0002368!5.64e-17!35;UBERON:0005911!5.67e-14!82;UBERON:0001242!2.84e-13!4;UBERON:0001262!2.84e-13!4;UBERON:0004786!2.84e-13!4;UBERON:0004808!2.84e-13!4;UBERON:0001277!2.84e-13!4;UBERON:0000949!4.41e-13!45;UBERON:0002530!9.77e-13!59;UBERON:0004921!3.07e-12!129;UBERON:0004185!3.07e-12!129;UBERON:0003350!8.29e-11!5;UBERON:0005172!1.34e-10!55;UBERON:0005173!1.34e-10!55;UBERON:0001007!6.11e-10!155;UBERON:0001555!6.11e-10!155;UBERON:0007026!6.11e-10!155;UBERON:0002417!1.70e-09!61;UBERON:0000916!1.70e-09!61;UBERON:0004119!5.43e-09!169;UBERON:0000925!5.43e-09!169;UBERON:0006595!5.43e-09!169;UBERON:0000490!8.44e-08!138;UBERON:0006955!1.36e-07!2;UBERON:0004801!1.36e-07!2;UBERON:0000160!2.92e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.38e-24;19!UBERON:0006925;2.38e-24;19!UBERON:0002423;1.17e-18;25!UBERON:0006955;2.55e-15;2!UBERON:0004801;2.55e-15;2!UBERON:0002365;5.18e-15;31!UBERON:0002330;5.18e-15;31!UBERON:0002368;1.25e-12;33!UBERON:0000949;3.59e-09;43!UBERON:0005172;3.64e-07;52!UBERON:0005173;3.64e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.31e-24,19;UBERON:0006925,2.31e-24,19;UBERON:0008836,2.31e-24,19;UBERON:0008835,3.95e-21,22;UBERON:0003894,3.95e-21,22;UBERON:0009854,3.07e-20,23;UBERON:0007499,1.14e-18,25;UBERON:0009497,1.14e-18,25;UBERON:0000015,1.14e-18,25;UBERON:0002423,1.14e-18,25;UBERON:0006235,1.14e-18,25;UBERON:0004161,1.14e-18,25;UBERON:0009856,5.65e-18,26;UBERON:0006955,2.74e-15,2;UBERON:0004801,2.74e-15,2;UBERON:0002365,3.61e-15,31;UBERON:0002330,3.61e-15,31;UBERON:0002368,1.69e-13,35;UBERON:0000949,1.30e-10,45;UBERON:0003929,6.41e-09,54;UBERON:0005172,6.41e-09,54;UBERON:0005173,6.41e-09,54;UBERON:0002530,3.36e-08,59;UBERON:0002417,4.53e-08,60;UBERON:0000916,4.53e-08,60 | |||
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|short_description=p@chr11:116700754..116700763,+ | |short_description=p@chr11:116700754..116700763,+ | ||
}} | }} |
Latest revision as of 18:28, 23 July 2015
Short description: | p@chr11:116700754..116700763, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:116700754..116700763, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 2.74e-15 | 2 |
hepatocyte | 1.60e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.31e-24 | 19 |
digestive gland | 2.31e-24 | 19 |
liver bud | 2.31e-24 | 19 |
hepatic diverticulum | 3.95e-21 | 22 |
liver primordium | 3.95e-21 | 22 |
digestive tract diverticulum | 3.07e-20 | 23 |
epithelial sac | 1.14e-18 | 25 |
epithelium of foregut-midgut junction | 1.14e-18 | 25 |
anatomical boundary | 1.14e-18 | 25 |
hepatobiliary system | 1.14e-18 | 25 |
foregut-midgut junction | 1.14e-18 | 25 |
septum transversum | 1.14e-18 | 25 |
sac | 5.65e-18 | 26 |
uterine epithelium | 2.74e-15 | 2 |
cervix epithelium | 2.74e-15 | 2 |
exocrine gland | 3.61e-15 | 31 |
exocrine system | 3.61e-15 | 31 |
endocrine gland | 1.69e-13 | 35 |
endocrine system | 1.30e-10 | 45 |
gut epithelium | 6.41e-09 | 54 |
abdomen element | 6.41e-09 | 54 |
abdominal segment element | 6.41e-09 | 54 |
gland | 3.36e-08 | 59 |
abdominal segment of trunk | 4.53e-08 | 60 |
abdomen | 4.53e-08 | 60 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 6.77e-07 | 5 |