FFCP PHASE1:Hg19::chr11:121896688..121896697,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:121896688..121896697,- | |||
|description=CAGE_peak_at_chr11:121896688..121896697,- | |description=CAGE_peak_at_chr11:121896688..121896697,- | ||
|id=chr11:121896688..121896697,- | |id=chr11:121896688..121896697,- | ||
|ontology_enrichment_celltype=CL:0002573!2.46e-09!2 | |ontology_enrichment_celltype=CL:0002573!2.46e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0002561;1.14e-27;2!CL:0002559;1.52e-24;5!CL:1000415;6.35e-08;2!CL:0000362;7.10e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002561,8.13e-28,2;CL:0002559,1.20e-24,5;CL:1000415,8.04e-08,2;CL:0000362,6.60e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;1.50e-14;1!DOID:0070004;1.50e-14;1!DOID:6193;1.50e-14;1!DOID:3350;6.35e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,8.17e-15,1;DOID:4960,1.61e-14,1;DOID:0070004,1.61e-14,1;DOID:3350,4.69e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.53e-16!115;UBERON:0001049!6.53e-16!57;UBERON:0005068!6.53e-16!57;UBERON:0006241!6.53e-16!57;UBERON:0007135!6.53e-16!57;UBERON:0002298!4.47e-15!8;UBERON:0000073!9.14e-14!94;UBERON:0001016!9.14e-14!94;UBERON:0002616!5.77e-12!59;UBERON:0001017!1.79e-11!82;UBERON:0002020!3.90e-11!34;UBERON:0003528!3.90e-11!34;UBERON:0001893!5.18e-11!34;UBERON:0005743!1.10e-10!86;UBERON:0000955!1.61e-10!69;UBERON:0006238!1.61e-10!69;UBERON:0002346!2.19e-10!90;UBERON:0000924!2.60e-10!173;UBERON:0006601!2.60e-10!173;UBERON:0003076!2.72e-10!15;UBERON:0003057!2.72e-10!15;UBERON:0002791!1.02e-09!33;UBERON:0004121!5.17e-09!169;UBERON:0003075!8.25e-09!86;UBERON:0007284!8.25e-09!86;UBERON:0000988!8.94e-09!3;UBERON:0002780!1.17e-08!41;UBERON:0001890!1.17e-08!41;UBERON:0006240!1.17e-08!41;UBERON:0001869!1.20e-08!32;UBERON:0003080!2.18e-08!42;UBERON:0006331!2.33e-08!3;UBERON:0001950!2.85e-08!20;UBERON:0001896!3.26e-08!3;UBERON:0005290!3.26e-08!3;UBERON:0010096!3.26e-08!3;UBERON:0002619!2.06e-07!22;UBERON:0004733!2.65e-07!12;UBERON:0002028!2.65e-07!12;UBERON:0007277!2.65e-07!12;UBERON:0002308!4.52e-07!9;UBERON:0000125!4.52e-07!9;UBERON:0000200!6.80e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0005933;1.14e-27;2!UBERON:0005942;1.14e-27;2!UBERON:0005932;1.14e-27;2!UBERON:0002073;1.52e-24;5!UBERON:0001003;1.37e-08;15!UBERON:0007376;1.37e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005933,8.13e-28,2;UBERON:0005942,8.13e-28,2;UBERON:0005932,8.13e-28,2;UBERON:0002073,1.20e-24,5;UBERON:0005086,1.20e-24,5;UBERON:0001003,1.27e-08,15;UBERON:0007376,1.27e-08,15;UBERON:0007383,1.27e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280901613404497,0.204154171254893,0,0.309977343527296,0,0,0,0,0,0,1.10825646193673,0,0,0,0,0.89694817844431,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,1.39310378409594,2.88751792667834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0.275673144969061,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409499734223957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76985594558733,0,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54787429224455,0,0,0,0,0,0,0,0,0.569797163602908,1.17330829640882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0.160753148465019,0,0,0,0,0.242998226632099,0,0,0.419636705079985,0,0,0,0,0,1.017074150619,0,0,0,0,0,0,0,0,0,0.129282956361551,0.66116300871345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0.573409195690071,0.110929051536852,0.124192805882767,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,1.20008329398946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0.655219697692825,0,0,0,0,1.20550485762571,0,0,0,0,0,0,0.471797825567689,0,0,5.31437300254207,0.867550349813015,0,0.318004350653419,0,0,0,0,0.192687675289379,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0,0,0.443910671357348,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.543757863814654,0.131545547125698,0,0.111231401892069,0,0.471346769748006,0,0,0,0,0,0,0,1.39086617842064,0,0,0,0,0,0.591660003652827,1.53384128566484,0.846774100381858,0,0,0,0,0,0,0.647428837187895,0,0,0,0.467878926924211,0,0,0,0,0,0,0,0,0,0,0,1.18818560130834,0.8453114551668,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.203974470572744,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0.378893491091197,3.48353369203032,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0.533636729388577,0,0,0,0.855690109280065,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280901613404497,0.204154171254893,0,0.309977343527296,0,0,0,0,0,0,1.10825646193673,0,0,0,0,0.89694817844431,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,1.39310378409594,2.88751792667834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0.275673144969061,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409499734223957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76985594558733,0,0,0,0,0.31900115973192,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54787429224455,0,0,0,0,0,0,0,0,0.569797163602908,1.17330829640882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0.160753148465019,0,0,0,0,0.242998226632099,0,0,0.419636705079985,0,0,0,0,0,1.017074150619,0,0,0,0,0,0,0,0,0,0.129282956361551,0.66116300871345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0.573409195690071,0.110929051536852,0.124192805882767,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,1.20008329398946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0.655219697692825,0,0,0,0,1.20550485762571,0,0,0,0,0,0,0.471797825567689,0,0,5.31437300254207,0.867550349813015,0,0.318004350653419,0,0,0,0,0.192687675289379,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0,0,0.443910671357348,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.543757863814654,0.131545547125698,0,0.111231401892069,0,0.471346769748006,0,0,0,0,0,0,0,1.39086617842064,0,0,0,0,0,0.591660003652827,1.53384128566484,0.846774100381858,0,0,0,0,0,0,0.647428837187895,0,0,0,0.467878926924211,0,0,0,0,0,0,0,0,0,0,0,1.18818560130834,0.8453114551668,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.203974470572744,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0.378893491091197,3.48353369203032,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0.533636729388577,0,0,0,0.855690109280065,0.406896178315738,0,0,0 | ||
|short_description=p@chr11:121896688..121896697,- | |short_description=p@chr11:121896688..121896697,- | ||
}} | }} |
Latest revision as of 19:15, 23 July 2015
Short description: | p@chr11:121896688..121896697, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:121896688..121896697, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
outer root sheath cell | 8.13e-28 | 2 |
hair follicle cell | 1.20e-24 | 5 |
epithelial cell of gall bladder | 8.04e-08 | 2 |
epidermal cell | 6.60e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hair root sheath | 8.13e-28 | 2 |
hair outer root sheath | 8.13e-28 | 2 |
bulb of hair follicle | 8.13e-28 | 2 |
hair follicle | 1.20e-24 | 5 |
hair follicle placode | 1.20e-24 | 5 |
skin epidermis | 1.27e-08 | 15 |
outer epithelium | 1.27e-08 | 15 |
enveloping layer of ectoderm | 1.27e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 8.17e-15 | 1 |
bone marrow cancer | 1.61e-14 | 1 |
myeloma | 1.61e-14 | 1 |
mesenchymal cell neoplasm | 4.69e-08 | 2 |