FFCP PHASE1:Hg19::chr11:124543773..124543782,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53340 | |EntrezGene=53340 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11210 | |HGNC=11210 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-23bp_to_ENST00000529498_5end | |association_with_transcript=-23bp_to_ENST00000529498_5end | ||
|cluster_id=chr11:124543773..124543782,+ | |||
|description=CAGE_peak_2_at_SPA17_5end | |description=CAGE_peak_2_at_SPA17_5end | ||
|id=chr11:124543773..124543782,+ | |id=chr11:124543773..124543782,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;2.39e-09;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3910;2.39e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,3.38e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0005743!3.75e-16!86;UBERON:0001017!1.71e-15!82;UBERON:0000073!6.14e-15!94;UBERON:0001016!6.14e-15!94;UBERON:0002780!2.60e-13!41;UBERON:0001890!2.60e-13!41;UBERON:0006240!2.60e-13!41;UBERON:0000955!2.70e-13!69;UBERON:0006238!2.70e-13!69;UBERON:0001049!3.41e-13!57;UBERON:0005068!3.41e-13!57;UBERON:0006241!3.41e-13!57;UBERON:0007135!3.41e-13!57;UBERON:0002346!3.79e-13!90;UBERON:0002616!6.91e-13!59;UBERON:0003080!1.29e-12!42;UBERON:0003075!1.36e-12!86;UBERON:0007284!1.36e-12!86;UBERON:0000033!6.76e-12!123;UBERON:0003056!7.83e-12!61;UBERON:0000153!1.69e-11!129;UBERON:0007811!1.69e-11!129;UBERON:0000924!8.31e-11!173;UBERON:0006601!8.31e-11!173;UBERON:0002020!1.13e-10!34;UBERON:0003528!1.13e-10!34;UBERON:0004121!2.76e-10!169;UBERON:0001893!7.37e-10!34;UBERON:0001869!1.04e-09!32;UBERON:0002791!1.38e-09!33;UBERON:0000956!9.39e-07!25;UBERON:0000203!9.39e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;2.39e-09;2!UBERON:0002173;2.39e-09;2!UBERON:0002186;2.39e-09;2!UBERON:0002298;5.28e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,3.38e-09,2;UBERON:0002173,3.38e-09,2;UBERON:0002186,3.38e-09,2;UBERON:0001017,3.34e-08,81;UBERON:0000073,1.96e-07,53;UBERON:0002616,1.96e-07,53;UBERON:0002298,3.93e-07,6;UBERON:0001016,4.31e-07,89;UBERON:0001049,6.21e-07,56;UBERON:0005068,6.21e-07,56;UBERON:0006241,6.21e-07,56;UBERON:0007135,6.21e-07,56 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.563817616383885,0,0,0.872338524100369,0,0,0,0.737201809504527,0,0.218441372130172,0,0.37129905888014,0,1.34465029290355,0,0,0,0,0,0.313454721478088,0.286235987131057,0.547497700291537,0.125542639594803,0.229240217243854,0.492603536699674,0.314843125254717,0,0,0.154816123316076,0,0,0,0.92960640696362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0.209658645508376,0,0.150176892841506,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.255725123687061,0,0,0.144846518960824,0,0,0.945348171640679,0.886917589850256,0.263504357079378,3.73290365168481,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0.419499436209906,0,0.208994966536811,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.563057402416611,0,0,0,0,0,0.436094052142534,0.496971951695318,0.633152558322899,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,1.1409436430889,0.298897361103602,0,0,0.280901613404497,0.204154171254893,1.22834317311768,0.309977343527296,0,0,0,0,1.17835279767846,0.750711119231785,1.10825646193673,0.438977620880838,0,0.150238058906597,0.453728732640084,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0,0,0.184099797284599,0,0,0,0.169560592310488,0,0.272746120590835,0.860413786167011,0.121973706129595,0,0.116193942869518,0.10366105501537,0.504641701751257,0.36497735907583,0,0.643240938192885,0,0.464367928031979,0,0.118306800039844,0.337169380156203,0.241011029883482,0,0.217879444092406,0.474541238222193,0.269662616320329,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0.882926198829301,0.122988438543114,0.343135620597051,0.219500570817251,1.1240175325762,0.301586917234893,0.185176890317059,0.325808305310325,0,0,0.115930404975077,0.234817388471643,0.721832238805369,0.462985512576611,0,0,0,0.492434012174795,0,0.148631162288728,0.93733833986777,0.503946384596579,0.425325291727159,0.0895585227028483,0.290633938513962,0,0,0.088048434013226,0,0,0,0.380987365753014,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0.5867062865676,0,0,0.845302752556,0,0,1.02882949704857,2.83698264046557,0,0.285955987316295,0,0.823240336780769,0.325736184293735,0,0,0.602878754119172,0,0.099972991182057,0,0.502257091432126,0,0.479249710983165,0,0,0,0,0.179060963239896,0,0,0,0,1.52456774533478,1.30139853857622,1.54657762555539,0.670065061337395,0.637938751653163,0,0,0.828831026872071,0.36807447515742,0,0,0.207970861530807,0.356857977594324,0.315404830067869,0.117141414992713,0,0,0,0,0.184369168541703,0.521301686808497,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.128139149255701,0.511707249066704,0,0,0.616838775210622,0.177561725313127,0.492762936082855,0,0,0,0,0.184161977871793,0,0.364182336013434,0.262248829918848,0.451199612907412,0.308061348417659,0,1.46139224653261,0.211103257785751,0,0,0.647747748306418,0,0.270946437543853,0,1.27438136522519,0.831076008928724,0.223874754722178,0.877039506583738,0.522870902049801,0.512900250232778,0.328014645699706,0.325378394664303,0,0.366277859273374,0.41254749960294,0,0,0,0.193341436584244,0.154048617114644,0,0.137836572484531,0.644521469209642,0.580066775656914,0.93749290157711,0.178064071293475,0.165284915360978,0.384380134730212,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0.190630193923825,0.255897791311334,0,0.318203247925937,0,0.179872457583315,0.274537029736055,0.117812402345686,0.202182481573316,1.58510321173008,0,0.48763373908959,0.243713489631284,0,0.136499911407986,0.282810863907425,0,0.551365343546124,1.32687795048244,0,0,0,0,0,0,0.430234056612155,0.0982490410131212,0,1.06428319221179,0.422215270595328,0,0,0.349934720244983,0.192444225451024,0,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.854592569019785,0,0.245040215981032,0.185803175125719,0.144269212976445,0.142283686696828,0.637705090915289,0,0,0.211673582723883,0,0,0.456469358066384,0,2.50634477090067,0,0.1605880751037,0.201799707191048,0.425846237690326,0,0.614481528616916,0.223676107892416,2.0021897005429,0.19538809540204,0.278406173895242,0,0,0,0,0.18714054040822,0.146508179271894,0.849523652246594,0,1.42068073403207,0,0,0,1.9882952955326,0.703347082052564,0.222617410045812,0.329607748453519,0.422250816255987,0,0,0.251932747854276,0.306806047506464,0,0.311039587661807,0.269605053441981,0,0,0.197286811273867,0,1.11136990144637,0,0.649376687132959,0,0.520855522170466,0,0,0.341380344856499,1.01701460117107,0.709163045303809,0.689486746482929,0.583209226766509,0,0.885741385813839,0.60298219312704,0,0,0.591095237907095,0.438770794307945,0,0.139423744278603,0.153900517007594,0.569710279235006,0,0.359030577639089,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,0.156980256395025,0,1.35357396370308,0.392125068635479,0.335643173951685,0.37950746544837,0.635746315921515,0.421996129056054,1.30586246527318,0,1.08194319871046,0,0,0,0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| ||
|short_description=p2@SPA17 | |short_description=p2@SPA17 | ||
}} | }} |
Latest revision as of 11:26, 16 September 2015
Short description: | p2@SPA17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SPA17_5end |
Coexpression cluster: | NA |
Association with transcript: | -23bp_to_ENST00000529498_5end |
EntrezGene: | SPA17 |
HGNC: | 11210 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 3.38e-09 | 2 |
alveolar duct | 3.38e-09 | 2 |
bronchiole | 3.38e-09 | 2 |
central nervous system | 3.34e-08 | 81 |
regional part of nervous system | 1.96e-07 | 53 |
regional part of brain | 1.96e-07 | 53 |
brainstem | 3.93e-07 | 6 |
nervous system | 4.31e-07 | 89 |
neural tube | 6.21e-07 | 56 |
neural rod | 6.21e-07 | 56 |
future spinal cord | 6.21e-07 | 56 |
neural keel | 6.21e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 3.38e-09 | 2 |