FFCP PHASE1:Hg19::chr11:129305906..129305908,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8538 | |EntrezGene=8538 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=956 | |HGNC=956 | ||
|TSSclassifier=strong | |||
|UniProt=G3V397 | |UniProt=G3V397 | ||
|association_with_transcript=-160bp_to_ENST00000526127_5end | |association_with_transcript=-160bp_to_ENST00000526127_5end | ||
|cluster_id=chr11:129305906..129305908,+ | |||
|coexpression_cluster_id=C97 | |||
|description=CAGE_peak_7_at_BARX2_5end | |description=CAGE_peak_7_at_BARX2_5end | ||
|id=chr11:129305906..129305908,+ | |id=chr11:129305906..129305908,+ | ||
|ontology_enrichment_celltype=CL:0000167!2.21e-40!1;CL:0000164!2.21e-40!1;CL:0000502!2.21e-40!1;CL:0000172!2.21e-40!1;CL:0000173!2.21e-40!1;CL:0002351!2.21e-40!1 | |ontology_enrichment_celltype=CL:0000167!2.21e-40!1;CL:0000164!2.21e-40!1;CL:0000502!2.21e-40!1;CL:0000172!2.21e-40!1;CL:0000173!2.21e-40!1;CL:0002351!2.21e-40!1 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4430!2.21e-40!1;DOID:171!7.51e-17!10;DOID:5409!2.53e-11!4;DOID:3095!3.15e-08!22;DOID:2994!3.15e-08!22;DOID:169!6.78e-08!6;DOID:0050687!1.55e-07!143;DOID:1325!5.08e-07!7;DOID:3904!5.08e-07!7 | |||
|ontology_enrichment_disease_v019=DOID:5409;7.35e-18;4!DOID:1325;8.16e-11;7!DOID:3904;8.16e-11;7!DOID:3905;1.04e-08;9!DOID:171;6.34e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,7.35e-18,4;DOID:1325,8.16e-11,7;DOID:3904,8.16e-11,7;DOID:3905,1.04e-08,9;DOID:171,6.13e-08,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;9.45e-18;4!UBERON:0000923;9.45e-18;4!UBERON:0010316;9.45e-18;4!UBERON:0005291;9.45e-18;4!UBERON:0002050;1.71e-14;5!UBERON:0005423;1.71e-14;5 | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p7@BARX2 | |short_description=p7@BARX2 | ||
}} | }} |
Latest revision as of 17:30, 16 September 2015
Short description: | p7@BARX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_BARX2_5end |
Coexpression cluster: | C97_small_smallcell_gastrointestinal_argyrophil_putamen_duodenum_brain |
Association with transcript: | -160bp_to_ENST00000526127_5end |
EntrezGene: | BARX2 |
HGNC: | 956 |
UniProt: | G3V397 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 7.35e-18 | 4 |
bronchus cancer | 8.16e-11 | 7 |
bronchogenic carcinoma | 8.16e-11 | 7 |
lung carcinoma | 1.04e-08 | 9 |
neuroectodermal tumor | 6.13e-08 | 10 |