FFCP PHASE1:Hg19::chr11:132814188..132814199,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:132814188..132814199,- | |||
|coexpression_cluster_id=C586 | |||
|description=CAGE_peak_at_chr11:132814188..132814199,- | |description=CAGE_peak_at_chr11:132814188..132814199,- | ||
|id=chr11:132814188..132814199,- | |id=chr11:132814188..132814199,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.33e-85;3!UBERON:0003056;1.09e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2513;1.54e-29;1!DOID:3451;1.66e-15;2!DOID:4159;1.66e-15;2!DOID:0060122;1.66e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,1.33e-29,1;DOID:3451,1.54e-15,2;DOID:4159,1.54e-15,2;DOID:0060122,1.54e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0005743!4.50e-36!86;UBERON:0001049!5.48e-36!57;UBERON:0005068!5.48e-36!57;UBERON:0006241!5.48e-36!57;UBERON:0007135!5.48e-36!57;UBERON:0001017!1.18e-35!82;UBERON:0002616!1.56e-34!59;UBERON:0000073!5.44e-34!94;UBERON:0001016!5.44e-34!94;UBERON:0000955!5.69e-33!69;UBERON:0006238!5.69e-33!69;UBERON:0003075!1.18e-31!86;UBERON:0007284!1.18e-31!86;UBERON:0002346!7.11e-30!90;UBERON:0002780!6.58e-28!41;UBERON:0001890!6.58e-28!41;UBERON:0006240!6.58e-28!41;UBERON:0003080!3.97e-27!42;UBERON:0003056!1.49e-25!61;UBERON:0001893!8.04e-25!34;UBERON:0002619!9.26e-24!22;UBERON:0001869!1.46e-23!32;UBERON:0001950!8.24e-23!20;UBERON:0002791!1.43e-22!33;UBERON:0000033!5.54e-21!123;UBERON:0000956!1.28e-20!25;UBERON:0000203!1.28e-20!25;UBERON:0000153!1.28e-19!129;UBERON:0007811!1.28e-19!129;UBERON:0002020!3.84e-19!34;UBERON:0003528!3.84e-19!34;UBERON:0004121!1.17e-18!169;UBERON:0000924!5.21e-18!173;UBERON:0006601!5.21e-18!173;UBERON:0007023!4.01e-17!115;UBERON:0000200!1.84e-13!6;UBERON:0004733!1.35e-12!12;UBERON:0002028!1.35e-12!12;UBERON:0007277!1.35e-12!12;UBERON:0004732!1.53e-11!13;UBERON:0001872!9.71e-11!5;UBERON:0002771!5.62e-10!3;UBERON:0003076!7.45e-10!15;UBERON:0003057!7.45e-10!15;UBERON:0000064!8.73e-10!219;UBERON:0001871!1.54e-09!7;UBERON:0002037!1.73e-09!6;UBERON:0006215!1.73e-09!6;UBERON:0002680!4.35e-09!9;UBERON:0001895!4.35e-09!9;UBERON:0010092!4.35e-09!9;UBERON:0000025!1.34e-08!194;UBERON:0001897!1.56e-07!2;UBERON:0000475!1.90e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;6.03e-43;6!UBERON:0002680;5.91e-29;9!UBERON:0001895;5.91e-29;9!UBERON:0004733;6.10e-22;12!UBERON:0002028;6.10e-22;12!UBERON:0004732;2.55e-20;13!UBERON:0001897;2.37e-15;2!UBERON:0010225;2.37e-15;2!UBERON:0000955;1.61e-08;68!UBERON:0000014;2.03e-08;4!UBERON:0002784;2.43e-08;4!UBERON:0001016;4.63e-07;83!UBERON:0000966;6.39e-07;5!UBERON:0005388;6.39e-07;5!UBERON:0001802;6.39e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,7.48e-43,6;UBERON:0006215,7.48e-43,6;UBERON:0002680,6.82e-29,9;UBERON:0001895,6.82e-29,9;UBERON:0010092,6.82e-29,9;UBERON:0004733,6.79e-22,12;UBERON:0002028,6.79e-22,12;UBERON:0007277,6.79e-22,12;UBERON:0004732,2.82e-20,13;UBERON:0003076,1.10e-17,15;UBERON:0003057,1.10e-17,15;UBERON:0001897,2.37e-15,2;UBERON:0010225,2.37e-15,2;UBERON:0000955,1.89e-10,68;UBERON:0006238,1.89e-10,68;UBERON:0000073,7.27e-09,53;UBERON:0002616,7.27e-09,53;UBERON:0001017,7.39e-09,81;UBERON:0003075,7.78e-09,82;UBERON:0007284,7.78e-09,82;UBERON:0002346,1.93e-08,86;UBERON:0000014,1.96e-08,4;UBERON:0001049,2.02e-08,56;UBERON:0005068,2.02e-08,56;UBERON:0006241,2.02e-08,56;UBERON:0007135,2.02e-08,56;UBERON:0002784,2.43e-08,4;UBERON:0001016,5.13e-08,89;UBERON:0010371,4.92e-07,104 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0.276149695926898,0,0,0.403008392910561,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463721619900307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482561763430822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17727711363265,0,0,0,0,0,0,0,0.463840490809256,3.99227596002388,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,5.41838373663001,2.06883333267483,0.438770794307945,0,0,0.153900517007594,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.242998226632099,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.3755727921195,0,0.221858103073705,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.319267718114302,0.41023272848151,0,0.553258019713743,0,0,0,0,0,0,0,0,0,0.150420656698515,0.20170506870352,0,0,0,0,0.742913430802341,0,0.413373593002368,0.19024743058172,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.591954962065642,0,0,0,0.157115589916002,0,0,0,0,1.71543706023975,0,0,0,0,0,0,0,0,0,0.255640214277473,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0.665320713092027,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0.276149695926898,0,0,0.403008392910561,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463721619900307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482561763430822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17727711363265,0,0,0,0,0,0,0,0.463840490809256,3.99227596002388,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,5.41838373663001,2.06883333267483,0.438770794307945,0,0,0.153900517007594,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.242998226632099,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.3755727921195,0,0.221858103073705,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.319267718114302,0.41023272848151,0,0.553258019713743,0,0,0,0,0,0,0,0,0,0.150420656698515,0.20170506870352,0,0,0,0,0.742913430802341,0,0.413373593002368,0.19024743058172,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.591954962065642,0,0,0,0.157115589916002,0,0,0,0,1.71543706023975,0,0,0,0,0,0,0,0,0,0.255640214277473,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0.665320713092027,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:132814188..132814199,- | |short_description=p@chr11:132814188..132814199,- | ||
}} | }} |
Latest revision as of 20:06, 23 July 2015
Short description: | p@chr11:132814188..132814199, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:132814188..132814199, - |
Coexpression cluster: | C586_cerebellum_brain_occipital_middle_parietal_medial_amygdala |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 7.48e-43 | 6 |
rhombic lip | 7.48e-43 | 6 |
regional part of metencephalon | 6.82e-29 | 9 |
metencephalon | 6.82e-29 | 9 |
future metencephalon | 6.82e-29 | 9 |
segmental subdivision of hindbrain | 6.79e-22 | 12 |
hindbrain | 6.79e-22 | 12 |
presumptive hindbrain | 6.79e-22 | 12 |
segmental subdivision of nervous system | 2.82e-20 | 13 |
posterior neural tube | 1.10e-17 | 15 |
chordal neural plate | 1.10e-17 | 15 |
dorsal plus ventral thalamus | 2.37e-15 | 2 |
thalamic complex | 2.37e-15 | 2 |
brain | 1.89e-10 | 68 |
future brain | 1.89e-10 | 68 |
regional part of nervous system | 7.27e-09 | 53 |
regional part of brain | 7.27e-09 | 53 |
central nervous system | 7.39e-09 | 81 |
neural plate | 7.78e-09 | 82 |
presumptive neural plate | 7.78e-09 | 82 |
neurectoderm | 1.93e-08 | 86 |
zone of skin | 1.96e-08 | 4 |
neural tube | 2.02e-08 | 56 |
neural rod | 2.02e-08 | 56 |
future spinal cord | 2.02e-08 | 56 |
neural keel | 2.02e-08 | 56 |
regional part of diencephalon | 2.43e-08 | 4 |
nervous system | 5.13e-08 | 89 |
ecto-epithelium | 4.92e-07 | 104 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 1.33e-29 | 1 |
skin carcinoma | 1.54e-15 | 2 |
skin cancer | 1.54e-15 | 2 |
integumentary system cancer | 1.54e-15 | 2 |