FFCP PHASE1:Mm9::chr18:24867975..24868003,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=225288 | |EntrezGene=225288 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=10 | |||
|TSSclassifier=NA | |||
|UniProt=Q76LL6,F8WHD7,E9Q1S4 | |UniProt=Q76LL6,F8WHD7,E9Q1S4 | ||
|association_with_transcript=29bp_to_ENSMUST00000037097,ENSMUST00000091991,ENSMUST00000115819,ENSMUST00000115820,ENSMUST00000169491,NM_175276,uc008eha.1,uc008ehb.1,uc008ehc.1,uc012bak.1_5end | |association_with_transcript=29bp_to_ENSMUST00000037097,ENSMUST00000091991,ENSMUST00000115819,ENSMUST00000115820,ENSMUST00000169491,NM_175276,uc008eha.1,uc008ehb.1,uc008ehc.1,uc012bak.1_5end | ||
|cluster_id=chr18:24867975..24868003,+ | |||
|description=CAGE_peak_1_at_Fhod3_5end | |description=CAGE_peak_1_at_Fhod3_5end | ||
|id=chr18:24867975..24868003,+ | |id=chr18:24867975..24868003,+ | ||
|ontology_enrichment_celltype=CL:0000540!5.26e-07!33;CL:0000047!5.26e-07!33;CL:0000031!5.26e-07!33;CL:0000404!5.26e-07!33;CL:0000117!7.28e-07!23;CL:0000337!7.28e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.95e-07,33;CL:0000047,3.95e-07,33;CL:0000031,3.95e-07,33;CL:0000404,3.95e-07,33;CL:0000117,5.51e-07,23;CL:0000337,5.51e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003103!1.19e-14!43;UBERON:0004121!2.44e-13!102;UBERON:0000924!2.44e-13!102;UBERON:0006601!2.44e-13!102;UBERON:0000468!1.19e-10!333;UBERON:0007100!2.03e-10!18;UBERON:0000948!2.03e-10!18;UBERON:0005498!2.03e-10!18;UBERON:0004140!2.03e-10!18;UBERON:0009881!2.03e-10!18;UBERON:0004141!2.03e-10!18;UBERON:0003084!2.03e-10!18;UBERON:0007005!2.03e-10!18;UBERON:0004139!2.03e-10!18;UBERON:0004291!2.03e-10!18;UBERON:0002346!3.81e-09!71;UBERON:0003075!3.81e-09!71;UBERON:0007284!3.81e-09!71;UBERON:0000033!4.63e-09!63;UBERON:0000073!2.87e-08!75;UBERON:0001016!2.87e-08!75;UBERON:0001017!3.84e-08!73;UBERON:0005743!3.84e-08!73;UBERON:0003056!4.32e-08!49;UBERON:0000489!4.82e-08!21;UBERON:0004111!8.60e-08!122;UBERON:0000922!1.34e-07!328;UBERON:0002020!2.89e-07!34;UBERON:0004535!4.71e-07!23;UBERON:0001009!4.71e-07!23;UBERON:0000479!6.61e-07!349;UBERON:0000025!8.40e-07!114;UBERON:0001049!9.02e-07!52;UBERON:0005068!9.02e-07!52;UBERON:0006241!9.02e-07!52;UBERON:0007135!9.02e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,7.27e-19,92;UBERON:0003103,4.36e-15,43;UBERON:0004121,7.21e-14,95;UBERON:0000924,7.21e-14,95;UBERON:0006601,7.21e-14,95;UBERON:0010371,3.07e-12,73;UBERON:0007100,1.28e-10,18;UBERON:0000948,1.28e-10,18;UBERON:0005498,1.28e-10,18;UBERON:0004140,1.28e-10,18;UBERON:0009881,1.28e-10,18;UBERON:0004141,1.28e-10,18;UBERON:0003084,1.28e-10,18;UBERON:0007005,1.28e-10,18;UBERON:0004139,1.28e-10,18;UBERON:0004291,1.28e-10,18;UBERON:0002346,1.12e-09,64;UBERON:0003075,1.12e-09,64;UBERON:0007284,1.12e-09,64;UBERON:0001016,2.25e-08,75;UBERON:0001017,3.03e-08,73;UBERON:0000489,3.43e-08,21;UBERON:0003056,4.33e-08,49;UBERON:0000922,5.68e-08,320;UBERON:0000073,2.12e-07,54;UBERON:0002020,3.13e-07,34;UBERON:0004111,5.87e-07,122;UBERON:0004535,7.31e-07,23;UBERON:0001009,7.31e-07,23;UBERON:0001049,7.66e-07,52;UBERON:0005068,7.66e-07,52;UBERON:0006241,7.66e-07,52;UBERON:0007135,7.66e-07,52 | |||
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| ||
|short_description=p1@Fhod3 | |short_description=p1@Fhod3 | ||
}} | }} |
Latest revision as of 02:57, 27 September 2015
Short description: | p1@Fhod3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fhod3_5end |
Coexpression cluster: | MCL_coexpression_mm9:10 |
Association with transcript: | 29bp_to_ENSMUST00000037097, ENSMUST00000091991, ENSMUST00000115819, ENSMUST00000115820, ENSMUST00000169491, NM_175276, uc008eha.1, uc008ehb.1, uc008ehc.1, uc012bak.1_5end |
EntrezGene: | Fhod3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.95e-07 | 33 |
neuronal stem cell | 3.95e-07 | 33 |
neuroblast | 3.95e-07 | 33 |
electrically signaling cell | 3.95e-07 | 33 |
CNS neuron (sensu Vertebrata) | 5.51e-07 | 23 |
neuroblast (sensu Vertebrata) | 5.51e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 7.27e-19 | 92 |
compound organ | 4.36e-15 | 43 |
ectoderm-derived structure | 7.21e-14 | 95 |
ectoderm | 7.21e-14 | 95 |
presumptive ectoderm | 7.21e-14 | 95 |
ecto-epithelium | 3.07e-12 | 73 |
primary circulatory organ | 1.28e-10 | 18 |
heart | 1.28e-10 | 18 |
primitive heart tube | 1.28e-10 | 18 |
primary heart field | 1.28e-10 | 18 |
anterior lateral plate mesoderm | 1.28e-10 | 18 |
heart tube | 1.28e-10 | 18 |
heart primordium | 1.28e-10 | 18 |
cardiac mesoderm | 1.28e-10 | 18 |
cardiogenic plate | 1.28e-10 | 18 |
heart rudiment | 1.28e-10 | 18 |
neurectoderm | 1.12e-09 | 64 |
neural plate | 1.12e-09 | 64 |
presumptive neural plate | 1.12e-09 | 64 |
nervous system | 2.25e-08 | 75 |
central nervous system | 3.03e-08 | 73 |
cavitated compound organ | 3.43e-08 | 21 |
pre-chordal neural plate | 4.33e-08 | 49 |
embryo | 5.68e-08 | 320 |
regional part of nervous system | 2.12e-07 | 54 |
gray matter | 3.13e-07 | 34 |
anatomical conduit | 5.87e-07 | 122 |
cardiovascular system | 7.31e-07 | 23 |
circulatory system | 7.31e-07 | 23 |
neural tube | 7.66e-07 | 52 |
neural rod | 7.66e-07 | 52 |
future spinal cord | 7.66e-07 | 52 |
neural keel | 7.66e-07 | 52 |