FFCP PHASE1:Mm9::chr18:82862265..82862325,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=329002 | |EntrezGene=329002 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2560 | |||
|TSSclassifier=NA | |||
|UniProt=B2RR24,Q3UAV3 | |UniProt=B2RR24,Q3UAV3 | ||
|association_with_transcript=-139bp_to_ENSMUST00000171071,NM_177832,uc008fub.2,uc012bfo.1,uc012bfp.1_5end | |association_with_transcript=-139bp_to_ENSMUST00000171071,NM_177832,uc008fub.2,uc012bfo.1,uc012bfp.1_5end | ||
|cluster_id=chr18:82862265..82862325,- | |||
|description=CAGE_peak_1_at_Zfp236_5end | |description=CAGE_peak_1_at_Zfp236_5end | ||
|id=chr18:82862265..82862325,- | |id=chr18:82862265..82862325,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.31e-08!29;UBERON:0006562!9.29e-08!24;UBERON:0001557!9.29e-08!24;UBERON:0001042!9.29e-08!24;UBERON:0008814!9.29e-08!24;UBERON:0009145!9.29e-08!24;UBERON:0002370!1.62e-07!23;UBERON:0000974!1.62e-07!23;UBERON:0004807!1.62e-07!23;UBERON:0005058!1.62e-07!23;UBERON:0003351!1.62e-07!23;UBERON:0009113!1.62e-07!23;UBERON:0003295!1.62e-07!23;UBERON:0009722!1.62e-07!23;UBERON:0005562!1.62e-07!23;UBERON:0007690!1.62e-07!23;UBERON:0003408!3.33e-07!24;UBERON:0005911!7.38e-07!69;UBERON:0000065!8.80e-07!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.31e-08,29;UBERON:0005057,1.31e-08,29;UBERON:0000077,5.39e-08,35;UBERON:0006562,9.29e-08,24;UBERON:0001557,9.29e-08,24;UBERON:0001042,9.29e-08,24;UBERON:0008814,9.29e-08,24;UBERON:0009145,9.29e-08,24;UBERON:0002370,1.62e-07,23;UBERON:0000974,1.62e-07,23;UBERON:0004807,1.62e-07,23;UBERON:0005058,1.62e-07,23;UBERON:0003351,1.62e-07,23;UBERON:0009113,1.62e-07,23;UBERON:0003295,1.62e-07,23;UBERON:0009722,1.62e-07,23;UBERON:0005562,1.62e-07,23;UBERON:0007690,1.62e-07,23;UBERON:0003408,3.33e-07,24;UBERON:0005911,7.38e-07,69;UBERON:0000065,8.80e-07,41 | |||
|phase1_expression=5.2849119544582,18.4956966048861,23.2049612088663,17.845388467103,19.5349334679075,10.5763941304491,9.1108929832255,20.4014851037691,13.093351160105,14.5120006319636,9.07455231595176,11.2478744183424,19.5168832121575,18.0086028983135,16.6554880907831,14.3757439846776,7.69518065940961,14.9844528545163,23.1723392793699,20.3707032863054,10.6304112688837,8.24114894967348,6.52999472847338,5.43974237497583,4.81759490241057,13.2073351746455,7.75371593086335,9.04979177280734,6.65081968097309,12.3494763582366,5.09980174507201,5.08024538767705,6.1506478758457,0,6.35473563452804,4.82080471539628,6.73758875665818,14.6486070757918,12.5013655123808,10.470474879476,21.1763335691165,17.7591826089196,18.4493934151838,3.9028013572429,3.85232338634155,3.30384153891027,3.12956537739216,3.2703773457067,3.07560655828261,3.11087838518853,3.49966054063406,1.43752564364972,14.4293041209653,16.6833292662609,18.1490651536931,3.34437266846731,8.5960031981627,6.18806510732931,11.5320382689971,6.34789175126439,7.60597684207415,2.37191172448392,1.77858959222228,5.84934816232909,1.97773272513395,2.8419204597844,1.19840044207362,1.53687322128622,11.4058573539325,12.4205463265155,14.9330722559481,4.85606673486466,2.20868540951614,12.7390431183552,12.172374819316,6.43453150627015,1.10115880999389,3.44755812830007,2.76491759861238,8.70449499019279,7.77644970620482,7.8137005583514,3.62937898701795,2.25105044012672,3.36156145108982,3.53554302568401,5.69486723196412,9.87917062874093,8.85996461998253,6.95258352982427,15.9425468785923,12.0459342777394,5.439770669662,4.31762553310254,10.3964226791627,8.06448396775204,6.03911006566533,5.96506129023202,3.89679006904303,6.36011234118612,6.4787973097273,5.13305909657271,7.64415719119937,21.3320010945999,1.73192832808971,3.04031838570118,2.52762222507392,9.93399753555822,20.1971549244794,5.34391700633369,7.80683970447611,4.26251669636998,4.61230994512117,5.57673770044703,6.82014501387088,5.52933001850572,8.40462890296871,7.37456720291549,12.3845477272982,11.0001457964238,9.71702681225732,10.6672555689749,9.31958806090611,7.31951992528868,9.21565509979202,7.15279754584056,6.58983184782562,2.39961092397363,3.93917703926501,3.44518470631092,7.32000964509802,8.29318723944905,4.69325664519146,3.83573185995496,3.94797284663164,6.00292673350703,7.94347038032467,8.58408097209642,3.79084137650512,7.15502310014011,6.37590170517248,6.89706313300419,7.74267158163002,8.59017461663576,9.25296388458059,10.3772113430728,11.6190138454064,6.72628763921441,9.91612767491074,9.8335161687266,8.09375171154165,8.32943783224784,8.06337022754234,9.75106066262066,7.40815691068596,10.3497818745616,4.21327912387941,4.37491442095016,4.83077948972507,7.45652781127807,4.92504725960302,5.58192390529146,6.15536312521547,8.26409773339096,6.94202007993202,6.27841650826101,6.43856163359086,6.77238985729583,7.40519324610662,7.05920095540109,8.99863785958999,6.57899943413995,7.68425403518677,7.24714661306008,4.20579897128254,8.12946437796347,13.5471701023357,8.46241813323342,8.10495352033889,9.52170354627798,7.47431275668141,7.86565746031036,5.33707305227689,8.56015317506516,4.2707615539006,4.11747386810027,5.7807098024062,8.15721535368718,7.21367122340745,5.39291645192533,8.64552199498777,8.96135729644652,4.36236172192088,10.6251116727048,3.38123207019241,8.14605311381257,5.62462212786115,8.76697748628982,10.560501699751,9.59465961867414,7.06494275286187,5.55287237648102,5.92905254174298,6.34011401721157,10.2210677458866,6.74586337154561,8.31726497692862,7.95884627182976,4.07401362850272,9.20627639842594,7.29608520487659,7.13859674289012,11.5014565221884,7.81495990103857,9.98520553966594,7.07220858251913,8.07288360848605,5.30687873499704,11.0851914099963,8.52711352967181,6.84452901056509,8.31750920298422,9.62230017982859,12.730475565578,9.28370199455454,15.4155581807661,11.3497303756458,9.08005227559977,9.08892181347676,9.99566219766002,8.63424909329478,11.2826265693579,4.52373851817817,8.70249094109935,6.39293554924747,12.1412168374082,2.88991061978026,3.6335622843583,5.57378814280696,10.856249869788,7.2566890465739,9.76096860741596,8.40151251157916,10.2756583119597,8.02075226696619,11.0399847007645,7.69140333182299,9.9366991689846,11.8586333383957,6.42642632843614,8.65834519770439,9.43747699436453,10.4247653986289,10.7230579932148,14.6019652173959,6.79785781233948,3.93020624054176,6.22396763194464,5.90603785761546,6.45613810682248,7.49442050187841,9.08834323693764,6.77345018930971,8.53299246426703,6.32511651449993,12.3762651897824,5.7874732978144,10.2634823597847,7.63216234318252,7.28745919107414,7.98031051390231,9.45354733290974,7.0756078858912,3.95804433848979,9.62154003061212,6.77862626764225,4.85162475720916,16.818397800031,12.4327608555847,11.218204036637,9.43041517624778,10.5050175836839,9.32738677215522,4.07935664423121,13.6696704638282,7.42992724667601,10.926477114813,10.7370020492674,11.4823151285661,10.5237959675,6.79913719975421,7.97723278244851,7.73919853304773,5.72802370809068,6.48488786841327,9.14937602070819,6.26430976766447,4.39085421630384,7.42432716737004,7.1478103583955,7.93473174963225,5.49687478166462,5.31421390496351,7.45607175704311,10.1464728963154,11.3632574993424,8.60384150376908,9.13920585217024,6.07051170345336,8.10989402355735,6.57200536416222,7.42164993610516,7.13043542094834,8.93861247056222,8.64090018773596,15.1685337901526,7.09538253515575,6.98434508720825,8.57477431653447,12.7108953923912,12.1195626416572,15.505212988076,12.9966783913628,16.2555984416518,15.85101578424,19.8627584719576,21.4407337627455,14.6241999293301,19.9859502730483,10.8830584135301,3.55177525398503,4.30626511725483,7.05115388729129,6.95482538515886,8.44571139530319,10.4396425832341,11.5758924702696,6.52043735245972,5.0827665835536,2.76195141904306,4.01026859407578,5.15559547031063,4.11049511862385,0.755393897389701,3.37511250115903,6.30449684513909,5.89085131679466,2.5888015587591,7.47268902606072,8.77854721482268,7.17081144167364,10.4535888339366,9.22297915563122,10.8467669985508,11.7790765734856,12.5681384915725,9.94849549734627,11.1186773176071,9.12525479604863,12.6379648728671,10.7687733590365,14.213583833881,12.0614484806788,15.7176918123414,12.2837385501547,11.9603716687497,7.00546031365621,6.77115032618228,10.2860775715625,6.92155644021416,7.39152188836695,12.6451382470126,12.7047663560696,12.5229619679681,12.6220301282213,7.89209134313529,10.4569167661314,9.53941861818155,11.5075967580449,14.9726813210856,9.00308294973317,13.634442024365,8.10207766120794,6.24526444844865,7.48581147025307,7.09074478359384,6.50380329034067,5.95596831622692,7.65163857547391 | |phase1_expression=5.2849119544582,18.4956966048861,23.2049612088663,17.845388467103,19.5349334679075,10.5763941304491,9.1108929832255,20.4014851037691,13.093351160105,14.5120006319636,9.07455231595176,11.2478744183424,19.5168832121575,18.0086028983135,16.6554880907831,14.3757439846776,7.69518065940961,14.9844528545163,23.1723392793699,20.3707032863054,10.6304112688837,8.24114894967348,6.52999472847338,5.43974237497583,4.81759490241057,13.2073351746455,7.75371593086335,9.04979177280734,6.65081968097309,12.3494763582366,5.09980174507201,5.08024538767705,6.1506478758457,0,6.35473563452804,4.82080471539628,6.73758875665818,14.6486070757918,12.5013655123808,10.470474879476,21.1763335691165,17.7591826089196,18.4493934151838,3.9028013572429,3.85232338634155,3.30384153891027,3.12956537739216,3.2703773457067,3.07560655828261,3.11087838518853,3.49966054063406,1.43752564364972,14.4293041209653,16.6833292662609,18.1490651536931,3.34437266846731,8.5960031981627,6.18806510732931,11.5320382689971,6.34789175126439,7.60597684207415,2.37191172448392,1.77858959222228,5.84934816232909,1.97773272513395,2.8419204597844,1.19840044207362,1.53687322128622,11.4058573539325,12.4205463265155,14.9330722559481,4.85606673486466,2.20868540951614,12.7390431183552,12.172374819316,6.43453150627015,1.10115880999389,3.44755812830007,2.76491759861238,8.70449499019279,7.77644970620482,7.8137005583514,3.62937898701795,2.25105044012672,3.36156145108982,3.53554302568401,5.69486723196412,9.87917062874093,8.85996461998253,6.95258352982427,15.9425468785923,12.0459342777394,5.439770669662,4.31762553310254,10.3964226791627,8.06448396775204,6.03911006566533,5.96506129023202,3.89679006904303,6.36011234118612,6.4787973097273,5.13305909657271,7.64415719119937,21.3320010945999,1.73192832808971,3.04031838570118,2.52762222507392,9.93399753555822,20.1971549244794,5.34391700633369,7.80683970447611,4.26251669636998,4.61230994512117,5.57673770044703,6.82014501387088,5.52933001850572,8.40462890296871,7.37456720291549,12.3845477272982,11.0001457964238,9.71702681225732,10.6672555689749,9.31958806090611,7.31951992528868,9.21565509979202,7.15279754584056,6.58983184782562,2.39961092397363,3.93917703926501,3.44518470631092,7.32000964509802,8.29318723944905,4.69325664519146,3.83573185995496,3.94797284663164,6.00292673350703,7.94347038032467,8.58408097209642,3.79084137650512,7.15502310014011,6.37590170517248,6.89706313300419,7.74267158163002,8.59017461663576,9.25296388458059,10.3772113430728,11.6190138454064,6.72628763921441,9.91612767491074,9.8335161687266,8.09375171154165,8.32943783224784,8.06337022754234,9.75106066262066,7.40815691068596,10.3497818745616,4.21327912387941,4.37491442095016,4.83077948972507,7.45652781127807,4.92504725960302,5.58192390529146,6.15536312521547,8.26409773339096,6.94202007993202,6.27841650826101,6.43856163359086,6.77238985729583,7.40519324610662,7.05920095540109,8.99863785958999,6.57899943413995,7.68425403518677,7.24714661306008,4.20579897128254,8.12946437796347,13.5471701023357,8.46241813323342,8.10495352033889,9.52170354627798,7.47431275668141,7.86565746031036,5.33707305227689,8.56015317506516,4.2707615539006,4.11747386810027,5.7807098024062,8.15721535368718,7.21367122340745,5.39291645192533,8.64552199498777,8.96135729644652,4.36236172192088,10.6251116727048,3.38123207019241,8.14605311381257,5.62462212786115,8.76697748628982,10.560501699751,9.59465961867414,7.06494275286187,5.55287237648102,5.92905254174298,6.34011401721157,10.2210677458866,6.74586337154561,8.31726497692862,7.95884627182976,4.07401362850272,9.20627639842594,7.29608520487659,7.13859674289012,11.5014565221884,7.81495990103857,9.98520553966594,7.07220858251913,8.07288360848605,5.30687873499704,11.0851914099963,8.52711352967181,6.84452901056509,8.31750920298422,9.62230017982859,12.730475565578,9.28370199455454,15.4155581807661,11.3497303756458,9.08005227559977,9.08892181347676,9.99566219766002,8.63424909329478,11.2826265693579,4.52373851817817,8.70249094109935,6.39293554924747,12.1412168374082,2.88991061978026,3.6335622843583,5.57378814280696,10.856249869788,7.2566890465739,9.76096860741596,8.40151251157916,10.2756583119597,8.02075226696619,11.0399847007645,7.69140333182299,9.9366991689846,11.8586333383957,6.42642632843614,8.65834519770439,9.43747699436453,10.4247653986289,10.7230579932148,14.6019652173959,6.79785781233948,3.93020624054176,6.22396763194464,5.90603785761546,6.45613810682248,7.49442050187841,9.08834323693764,6.77345018930971,8.53299246426703,6.32511651449993,12.3762651897824,5.7874732978144,10.2634823597847,7.63216234318252,7.28745919107414,7.98031051390231,9.45354733290974,7.0756078858912,3.95804433848979,9.62154003061212,6.77862626764225,4.85162475720916,16.818397800031,12.4327608555847,11.218204036637,9.43041517624778,10.5050175836839,9.32738677215522,4.07935664423121,13.6696704638282,7.42992724667601,10.926477114813,10.7370020492674,11.4823151285661,10.5237959675,6.79913719975421,7.97723278244851,7.73919853304773,5.72802370809068,6.48488786841327,9.14937602070819,6.26430976766447,4.39085421630384,7.42432716737004,7.1478103583955,7.93473174963225,5.49687478166462,5.31421390496351,7.45607175704311,10.1464728963154,11.3632574993424,8.60384150376908,9.13920585217024,6.07051170345336,8.10989402355735,6.57200536416222,7.42164993610516,7.13043542094834,8.93861247056222,8.64090018773596,15.1685337901526,7.09538253515575,6.98434508720825,8.57477431653447,12.7108953923912,12.1195626416572,15.505212988076,12.9966783913628,16.2555984416518,15.85101578424,19.8627584719576,21.4407337627455,14.6241999293301,19.9859502730483,10.8830584135301,3.55177525398503,4.30626511725483,7.05115388729129,6.95482538515886,8.44571139530319,10.4396425832341,11.5758924702696,6.52043735245972,5.0827665835536,2.76195141904306,4.01026859407578,5.15559547031063,4.11049511862385,0.755393897389701,3.37511250115903,6.30449684513909,5.89085131679466,2.5888015587591,7.47268902606072,8.77854721482268,7.17081144167364,10.4535888339366,9.22297915563122,10.8467669985508,11.7790765734856,12.5681384915725,9.94849549734627,11.1186773176071,9.12525479604863,12.6379648728671,10.7687733590365,14.213583833881,12.0614484806788,15.7176918123414,12.2837385501547,11.9603716687497,7.00546031365621,6.77115032618228,10.2860775715625,6.92155644021416,7.39152188836695,12.6451382470126,12.7047663560696,12.5229619679681,12.6220301282213,7.89209134313529,10.4569167661314,9.53941861818155,11.5075967580449,14.9726813210856,9.00308294973317,13.634442024365,8.10207766120794,6.24526444844865,7.48581147025307,7.09074478359384,6.50380329034067,5.95596831622692,7.65163857547391 | ||
|short_description=p1@Zfp236 | |short_description=p1@Zfp236 | ||
}} | }} |
Latest revision as of 19:11, 1 October 2015
Short description: | p1@Zfp236 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Zfp236_5end |
Coexpression cluster: | MCL_coexpression_mm9:2560 |
Association with transcript: | -139bp_to_ENSMUST00000171071, NM_177832, uc008fub.2, uc012bfo.1, uc012bfp.1_5end |
EntrezGene: | Zfp236 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 1.31e-08 | 29 |
immune organ | 1.31e-08 | 29 |
mixed endoderm/mesoderm-derived structure | 5.39e-08 | 35 |
pharynx | 9.29e-08 | 24 |
upper respiratory tract | 9.29e-08 | 24 |
chordate pharynx | 9.29e-08 | 24 |
pharyngeal arch system | 9.29e-08 | 24 |
pharyngeal region of foregut | 9.29e-08 | 24 |
thymus | 1.62e-07 | 23 |
neck | 1.62e-07 | 23 |
respiratory system epithelium | 1.62e-07 | 23 |
hemolymphoid system gland | 1.62e-07 | 23 |
pharyngeal epithelium | 1.62e-07 | 23 |
thymic region | 1.62e-07 | 23 |
pharyngeal gland | 1.62e-07 | 23 |
entire pharyngeal arch endoderm | 1.62e-07 | 23 |
thymus primordium | 1.62e-07 | 23 |
early pharyngeal endoderm | 1.62e-07 | 23 |
gland of gut | 3.33e-07 | 24 |
endo-epithelium | 7.38e-07 | 69 |
respiratory tract | 8.80e-07 | 41 |