FFCP PHASE1:Hg19::chr11:6624970..6625034,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3611 | |EntrezGene=3611 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6040 | |HGNC=6040 | ||
|TSSclassifier=strong | |||
|UniProt=Q13418,E9PQ52,E9PNR4,E9PM54,B7Z418 | |UniProt=Q13418,E9PQ52,E9PNR4,E9PM54,B7Z418 | ||
|association_with_transcript=0bp_to_ENST00000420936,ENST00000526114,ENST00000527121,ENST00000527327,ENST00000527394,ENST00000528995,ENST00000534565_5end | |association_with_transcript=0bp_to_ENST00000420936,ENST00000526114,ENST00000527121,ENST00000527327,ENST00000527394,ENST00000528995,ENST00000534565_5end | ||
|cluster_id=chr11:6624970..6625034,+ | |||
|coexpression_cluster_id=C345 | |||
|description=CAGE_peak_1_at_ILK_5end | |description=CAGE_peak_1_at_ILK_5end | ||
|id=chr11:6624970..6625034,+ | |id=chr11:6624970..6625034,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.88e-30!180;CL:0000183!3.41e-20!59;CL:0000192!4.18e-19!42;CL:0000514!4.18e-19!42;CL:0000680!1.09e-17!57;CL:0000056!1.09e-17!57;CL:0000355!1.09e-17!57;CL:0000187!1.69e-17!54;CL:0000222!5.34e-17!119;CL:0000057!1.74e-16!75;CL:0000359!4.44e-16!32;CL:0002371!1.68e-13!591;CL:0000393!2.48e-13!60;CL:0000211!2.48e-13!60;CL:0000144!1.83e-09!625;CL:0000048!3.95e-08!430;CL:0002620!1.30e-07!23;CL:0000723!1.53e-07!436 | |ontology_enrichment_celltype=CL:0000055!3.88e-30!180;CL:0000183!3.41e-20!59;CL:0000192!4.18e-19!42;CL:0000514!4.18e-19!42;CL:0000680!1.09e-17!57;CL:0000056!1.09e-17!57;CL:0000355!1.09e-17!57;CL:0000187!1.69e-17!54;CL:0000222!5.34e-17!119;CL:0000057!1.74e-16!75;CL:0000359!4.44e-16!32;CL:0002371!1.68e-13!591;CL:0000393!2.48e-13!60;CL:0000211!2.48e-13!60;CL:0000144!1.83e-09!625;CL:0000048!3.95e-08!430;CL:0002620!1.30e-07!23;CL:0000723!1.53e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000359;4.16e-15;32!CL:0000192;2.02e-13;43!CL:0000187;1.09e-09;55!CL:0000134;7.61e-09;55!CL:0000057;7.49e-08;73!CL:0002620;1.30e-07;23!CL:0000048;3.15e-07;58!CL:0000723;4.04e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,7.55e-19,43;CL:0000514,7.55e-19,43;CL:0000680,1.54e-17,58;CL:0000056,1.54e-17,58;CL:0000355,1.54e-17,58;CL:0000187,2.45e-17,55;CL:0000222,2.48e-17,121;CL:0000057,6.81e-17,76;CL:0000359,4.44e-16,32;CL:0000393,3.04e-13,61;CL:0000211,3.04e-13,61;CL:0000048,3.98e-08,427;CL:0002620,1.30e-07,23;CL:0000723,1.54e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000514;2.02e-13;43!CL:0000355;4.56e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.92e-23!83;UBERON:0002329!1.92e-23!83;UBERON:0003077!1.92e-23!83;UBERON:0003059!1.92e-23!83;UBERON:0007282!1.92e-23!83;UBERON:0009618!1.92e-23!83;UBERON:0007285!1.92e-23!83;UBERON:0001009!4.08e-22!113;UBERON:0004535!2.42e-21!110;UBERON:0002049!3.76e-21!79;UBERON:0007798!3.76e-21!79;UBERON:0004290!5.23e-21!70;UBERON:0004872!9.63e-21!84;UBERON:0005256!1.48e-20!143;UBERON:0000486!6.70e-19!82;UBERON:0001981!2.97e-18!60;UBERON:0007500!2.97e-18!60;UBERON:0004537!2.97e-18!60;UBERON:0006965!2.97e-18!60;UBERON:0002385!5.43e-18!63;UBERON:0001015!5.43e-18!63;UBERON:0000383!5.43e-18!63;UBERON:0003914!1.04e-17!118;UBERON:0000055!1.13e-17!69;UBERON:0001134!1.16e-17!61;UBERON:0002036!1.16e-17!61;UBERON:0003082!1.16e-17!61;UBERON:0001637!3.69e-16!42;UBERON:0003509!3.69e-16!42;UBERON:0004572!3.69e-16!42;UBERON:0000926!2.83e-15!448;UBERON:0004120!2.83e-15!448;UBERON:0006603!2.83e-15!448;UBERON:0000468!6.88e-15!659;UBERON:0003081!1.52e-13!216;UBERON:0002100!4.95e-13!216;UBERON:0000467!5.77e-13!625;UBERON:0000480!7.90e-13!626;UBERON:0004573!1.18e-12!33;UBERON:0004571!1.18e-12!33;UBERON:0000490!1.13e-11!138;UBERON:0003104!4.73e-09!238;UBERON:0009142!4.73e-09!238;UBERON:0002204!8.87e-09!167;UBERON:0000475!5.47e-08!365;UBERON:0000119!6.07e-08!312;UBERON:0000481!6.19e-08!347;UBERON:0003103!6.93e-08!69;UBERON:0002050!8.28e-08!605;UBERON:0005423!8.28e-08!605;UBERON:0000922!1.17e-07!612;UBERON:0007100!1.49e-07!27;UBERON:0000923!1.61e-07!604;UBERON:0005291!1.61e-07!604;UBERON:0006598!1.61e-07!604;UBERON:0002532!1.61e-07!604;UBERON:0000483!2.13e-07!309;UBERON:0000947!2.98e-07!21;UBERON:0010191!2.98e-07!21;UBERON:0000479!5.32e-07!787;UBERON:0000948!7.07e-07!24;UBERON:0005498!7.07e-07!24;UBERON:0004140!7.07e-07!24;UBERON:0009881!7.07e-07!24;UBERON:0004141!7.07e-07!24;UBERON:0003084!7.07e-07!24;UBERON:0007005!7.07e-07!24;UBERON:0004139!7.07e-07!24;UBERON:0004291!7.07e-07!24;UBERON:0003102!8.22e-07!95;UBERON:0002199!9.44e-07!45;UBERON:0002416!9.44e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.89e-11;42!UBERON:0003509;1.89e-11;42!UBERON:0004572;1.89e-11;42!UBERON:0004573;2.06e-11;33!UBERON:0004571;2.06e-11;33!UBERON:0007500;9.09e-10;56!UBERON:0001981;9.09e-10;56!UBERON:0004537;9.09e-10;56!UBERON:0003914;1.76e-08;74!UBERON:0002049;1.90e-08;75!UBERON:0007798;1.90e-08;75!UBERON:0000055;6.00e-08;65!UBERON:0000947;2.88e-07;21!UBERON:0010191;2.88e-07;21!UBERON:0007100;6.87e-07;25!UBERON:0001009;9.90e-07;112 | |||
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| ||
|short_description=p1@ILK | |short_description=p1@ILK | ||
}} | }} |
Latest revision as of 14:35, 19 September 2015
Short description: | p1@ILK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ILK_5end |
Coexpression cluster: | C345_Mesenchymal_Fibroblast_Alveolar_Renal_Pericytes_Hepatic_Smooth |
Association with transcript: | 0bp_to_ENST00000420936, ENST00000526114, ENST00000527121, ENST00000527327, ENST00000527394, ENST00000528995, ENST00000534565_5end |
EntrezGene: | ILK |
HGNC: | 6040 |
UniProt: | Q13418E9PQ52E9PNR4E9PM54B7Z418 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 7.55e-19 | 43 |
smooth muscle myoblast | 7.55e-19 | 43 |
muscle precursor cell | 1.54e-17 | 58 |
myoblast | 1.54e-17 | 58 |
multi-potent skeletal muscle stem cell | 1.54e-17 | 58 |
muscle cell | 2.45e-17 | 55 |
mesodermal cell | 2.48e-17 | 121 |
fibroblast | 6.81e-17 | 76 |
vascular associated smooth muscle cell | 4.44e-16 | 32 |
electrically responsive cell | 3.04e-13 | 61 |
electrically active cell | 3.04e-13 | 61 |
multi fate stem cell | 3.98e-08 | 427 |
skin fibroblast | 1.30e-07 | 23 |
somatic stem cell | 1.54e-07 | 433 |