FFCP PHASE1:Hg19::chr11:9797253..9797262,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-15bp_to_ENST00000534671_5end | |association_with_transcript=-15bp_to_ENST00000534671_5end | ||
|cluster_id=chr11:9797253..9797262,+ | |||
|coexpression_cluster_id=C3214 | |||
|description=CAGE_peak_2_at_ENST00000534671_5end | |description=CAGE_peak_2_at_ENST00000534671_5end | ||
|id=chr11:9797253..9797262,+ | |id=chr11:9797253..9797262,+ | ||
|ontology_enrichment_celltype=CL:0002537!5.58e-11!5;CL:0002620!1.67e-10!23;CL:0000055!5.40e-07!180;CL:0002622!5.87e-07!3 | |ontology_enrichment_celltype=CL:0002537!5.58e-11!5;CL:0002620!1.67e-10!23;CL:0000055!5.40e-07!180;CL:0002622!5.87e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002537;3.82e-28;5!CL:1000487;3.03e-12;2!CL:0000349;4.03e-10;19!CL:0000197;6.62e-09;6!CL:0000098;6.62e-09;6!CL:0002167;6.62e-09;6!CL:0002622;1.89e-08;3!CL:0000511;9.23e-07;1!CL:0002625;9.23e-07;1!CL:0002574;9.23e-07;1!CL:0000216;9.23e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,2.59e-28,5;CL:1000487,2.79e-12,2;CL:0000349,3.28e-10,19;CL:0000197,8.95e-09,6;CL:0000098,8.95e-09,6;CL:0002167,8.95e-09,6;CL:0002622,2.24e-08,3;CL:0002574,6.02e-07,1;CL:0000511,7.57e-07,1;CL:0002625,7.57e-07,1;CL:0000216,7.57e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;2.09e-07;1!DOID:4549;2.09e-07;1!DOID:5861;2.09e-07;1!DOID:6496;2.09e-07;1!DOID:3151;3.78e-07;1!DOID:3149;3.78e-07;1!DOID:3369;9.23e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,2.09e-07,1;DOID:4549,2.09e-07,1;DOID:5861,2.09e-07,1;DOID:6496,2.09e-07,1;DOID:3151,3.57e-07,1;DOID:3149,3.57e-07,1;DOID:3369,9.51e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004871!2.59e-09!8;UBERON:0000305!1.18e-07!7;UBERON:0002097!9.58e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;4.58e-20;7!UBERON:0005631;1.01e-19;10!UBERON:0000158;1.01e-19;10!UBERON:0002367;2.36e-08;11!UBERON:0010147;2.36e-08;11!UBERON:0000478;6.83e-08;24!UBERON:0003937;1.16e-07;12!UBERON:0005399;1.16e-07;12!UBERON:0001136;9.23e-07;1!UBERON:0001343;9.23e-07;1!UBERON:0004910;9.23e-07;1!UBERON:0004813;9.23e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004871,5.76e-25,8;UBERON:0000305,3.48e-20,7;UBERON:0005631,4.63e-14,14;UBERON:0000158,4.63e-14,14;UBERON:0004122,3.93e-09,15;UBERON:0002367,2.51e-08,11;UBERON:0010147,2.51e-08,11;UBERON:0009846,2.51e-08,11;UBERON:0003353,2.51e-08,11;UBERON:0004902,2.51e-08,11;UBERON:0003820,2.51e-08,11;UBERON:0009847,2.51e-08,11;UBERON:0000478,5.82e-08,24;UBERON:0003937,1.22e-07,12;UBERON:0005399,1.22e-07,12;UBERON:0001136,7.57e-07,1;UBERON:0001343,7.57e-07,1;UBERON:0004910,7.57e-07,1;UBERON:0005154,7.57e-07,1;UBERON:0005295,7.57e-07,1;UBERON:0004813,7.57e-07,1;UBERON:0005297,7.57e-07,1;UBERON:0005294,7.57e-07,1;UBERON:0010141,7.57e-07,1;UBERON:0005891,7.57e-07,1 | |||
|phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02290049474824,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.12663051166458,0.397227542439656,0.286836620748814,0,0,0,0,0,0,0,0.302714855289863,0.576175924479999,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0.179389635688862,0.85422955527427,0.635795703478686,0,0.206105058476878,1.03056216018252,0.558350568994769,0,0,0.252433774244115,0.920498986422993,4.36444353410792,0,0.10075209822764,0.67824236924195,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0.721879481669586,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,2.92531928243358,2.08014873822732,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,1.03985430765404,2.14114786556594,0.473107245101804,1.52283839490527,0.902838299183157,2.27407504055985,0,0,0,1.82455590382974,0,0,0,0,0,0,0,0,1.24053903909388,0.153461973288062,0,0.256278298511402,0,0,0,0,0.177561725313127,0,0,0,0,0,0,2.29628896329214,0.910455840033585,1.31124414959424,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0.219259876645935,1.0457418040996,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0.275673144969061,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.632758849437452,0,0,0.42793898803392,0,0,3.41757669408298,0.54907405947211,0.353437207037059,0,0,0,0,0,0,2.45699840534374,1.55545975149084,0,0,0,0,0,0,0,0,0,0.143411352204052,2.45622602532803,0,0,0,1.64647446479951,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,2.88424992044177,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67121139316383,1.48482340416319,2.76444631889309,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,2.78847488557207,0,0,0,0,0,0,1.64875668123352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,11.649808723278,0.225980740780532,0,0,0,0.782205530939212,0,0,0,0,0,0,0,0,0,1.9026588850306,1.569042694685,0.407992870545287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68347750079413,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.701139929541673,0,0.189403005275089,0.251567901752575,0,0.457680136793847,0.907385542579434,0,0,0,0,0,0,0.265841714557995,0.521745061811734,0,0,0,0,0,0.464033759878494,1.19428766609585,0,0,0,0,0,0.428883182749851,0,0,0,0,0.179088841081487,0,0.219284049578707,0,0,0,0,0.345430341731199,1.21543982470953,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.2061731150044,0,0,0,0,0,0,0,0,0.0981477185010256,3.65706142377995,0.183428598521679,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253397002022874,0.203977659483963,0,0.18378979906969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0.533636729388577,1.9307228228694,0,0,0,0,0,0,0 | |phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02290049474824,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.12663051166458,0.397227542439656,0.286836620748814,0,0,0,0,0,0,0,0.302714855289863,0.576175924479999,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0.179389635688862,0.85422955527427,0.635795703478686,0,0.206105058476878,1.03056216018252,0.558350568994769,0,0,0.252433774244115,0.920498986422993,4.36444353410792,0,0.10075209822764,0.67824236924195,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0.721879481669586,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,2.92531928243358,2.08014873822732,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,1.03985430765404,2.14114786556594,0.473107245101804,1.52283839490527,0.902838299183157,2.27407504055985,0,0,0,1.82455590382974,0,0,0,0,0,0,0,0,1.24053903909388,0.153461973288062,0,0.256278298511402,0,0,0,0,0.177561725313127,0,0,0,0,0,0,2.29628896329214,0.910455840033585,1.31124414959424,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0.219259876645935,1.0457418040996,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0.275673144969061,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.632758849437452,0,0,0.42793898803392,0,0,3.41757669408298,0.54907405947211,0.353437207037059,0,0,0,0,0,0,2.45699840534374,1.55545975149084,0,0,0,0,0,0,0,0,0,0.143411352204052,2.45622602532803,0,0,0,1.64647446479951,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,2.88424992044177,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67121139316383,1.48482340416319,2.76444631889309,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,2.78847488557207,0,0,0,0,0,0,1.64875668123352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,11.649808723278,0.225980740780532,0,0,0,0.782205530939212,0,0,0,0,0,0,0,0,0,1.9026588850306,1.569042694685,0.407992870545287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68347750079413,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.701139929541673,0,0.189403005275089,0.251567901752575,0,0.457680136793847,0.907385542579434,0,0,0,0,0,0,0.265841714557995,0.521745061811734,0,0,0,0,0,0.464033759878494,1.19428766609585,0,0,0,0,0,0.428883182749851,0,0,0,0,0.179088841081487,0,0.219284049578707,0,0,0,0,0.345430341731199,1.21543982470953,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.2061731150044,0,0,0,0,0,0,0,0,0.0981477185010256,3.65706142377995,0.183428598521679,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253397002022874,0.203977659483963,0,0.18378979906969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0.533636729388577,1.9307228228694,0,0,0,0,0,0,0 | ||
|short_description=p2@ENST00000534671 | |short_description=p2@ENST00000534671 | ||
}} | }} |
Latest revision as of 03:51, 24 July 2015
Short description: | p2@ENST00000534671 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000534671_5end |
Coexpression cluster: | C3214_oral_normal_Mesenchymal_Fibroblast_extraskeletal_Smooth_cervical |
Association with transcript: | -15bp_to_ENST00000534671_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 2.59e-28 | 5 |
smooth muscle cell of prostate | 2.79e-12 | 2 |
extraembryonic cell | 3.28e-10 | 19 |
receptor cell | 8.95e-09 | 6 |
sensory epithelial cell | 8.95e-09 | 6 |
olfactory epithelial cell | 8.95e-09 | 6 |
prostate stromal cell | 2.24e-08 | 3 |
stromal cell of pancreas | 6.02e-07 | 1 |
androgen binding protein secreting cell | 7.57e-07 | 1 |
seminiferous tubule epithelial cell | 7.57e-07 | 1 |
Sertoli cell | 7.57e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
somatic layer of lateral plate mesoderm | 5.76e-25 | 8 |
amnion | 3.48e-20 | 7 |
extraembryonic membrane | 4.63e-14 | 14 |
membranous layer | 4.63e-14 | 14 |
genitourinary system | 3.93e-09 | 15 |
prostate gland | 2.51e-08 | 11 |
male accessory sex gland | 2.51e-08 | 11 |
embryonic cloacal epithelium | 2.51e-08 | 11 |
epithelium of hindgut | 2.51e-08 | 11 |
urogenital sinus epithelium | 2.51e-08 | 11 |
prostate bud | 2.51e-08 | 11 |
prostate field | 2.51e-08 | 11 |
extraembryonic structure | 5.82e-08 | 24 |
sex gland | 1.22e-07 | 12 |
male reproductive gland | 1.22e-07 | 12 |
mesothelium | 7.57e-07 | 1 |
seminiferous tubule of testis | 7.57e-07 | 1 |
epithelium of male gonad | 7.57e-07 | 1 |
epithelial cord | 7.57e-07 | 1 |
sex cord | 7.57e-07 | 1 |
seminiferous tubule epithelium | 7.57e-07 | 1 |
testis sex cord | 7.57e-07 | 1 |
genital ridge | 7.57e-07 | 1 |
primitive sex cord of indifferent gonad | 7.57e-07 | 1 |
coelomic epithelium | 7.57e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.09e-07 | 1 |
extraosseous chondrosarcoma | 2.09e-07 | 1 |
myxoid chondrosarcoma | 2.09e-07 | 1 |
extraskeletal myxoid chondrosarcoma | 2.09e-07 | 1 |
skin squamous cell carcinoma | 3.57e-07 | 1 |
keratoacanthoma | 3.57e-07 | 1 |
peripheral primitive neuroectodermal tumor | 9.51e-07 | 1 |