Personal tools

FFCP PHASE1:Mm9::chr1:52065530..52065548,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20849
|EntrezGene=20849
|HGNC=
|HGNC=
|MCL_coexpression_id=2312
|TSSclassifier=NA
|UniProt=Q3V157,P42228
|UniProt=Q3V157,P42228
|association_with_transcript=442bp_to_ENSMUST00000027277,NM_011487,uc007axw.1,uc007axx.1_5end
|association_with_transcript=442bp_to_ENSMUST00000027277,NM_011487,uc007axw.1,uc007axx.1_5end
|cluster_id=chr1:52065530..52065548,+
|description=CAGE_peak_3_at_Stat4_5end
|description=CAGE_peak_3_at_Stat4_5end
|id=chr1:52065530..52065548,+
|id=chr1:52065530..52065548,+
|ontology_enrichment_celltype=CL:0000791!2.04e-08!9;CL:0000789!2.04e-08!9;CL:0002420!2.04e-08!9;CL:0002419!2.04e-08!9;CL:0000790!2.04e-08!9;CL:0000624!1.39e-07!8;CL:0000838!6.20e-07!12
|ontology_enrichment_celltype_v019_2=CL:0000791,1.30e-15,9;CL:0000789,1.30e-15,9;CL:0002420,1.30e-15,9;CL:0002419,1.30e-15,9;CL:0000790,1.30e-15,9;CL:0000838,5.35e-14,12;CL:0000624,6.57e-14,8;CL:0002031,3.44e-13,25;CL:0000542,1.02e-12,13;CL:0000051,1.02e-12,13;CL:0000084,2.34e-12,11;CL:0000827,2.34e-12,11;CL:0000988,3.62e-12,32;CL:0002032,3.62e-12,32;CL:0000037,3.62e-12,32;CL:0000837,3.62e-12,32;CL:0000893,1.19e-10,6;CL:0002489,1.19e-10,6;CL:0000898,1.19e-10,6;CL:0000809,1.19e-10,6;CL:0000810,1.19e-10,6;CL:0000895,1.19e-10,6;CL:0000808,1.19e-10,6;CL:0000894,1.19e-10,6;CL:0000806,1.19e-10,6;CL:0000807,1.19e-10,6;CL:0000805,1.19e-10,6;CL:0002425,1.19e-10,6;CL:0002436,1.19e-10,6;CL:0002427,1.19e-10,6;CL:0002428,1.19e-10,6;CL:0002429,1.19e-10,6;CL:0002433,1.19e-10,6;CL:0002431,1.19e-10,6;CL:0002432,1.19e-10,6;CL:0000738,4.09e-09,17;CL:0002087,4.09e-09,17;CL:0002320,5.26e-08,46;CL:0000134,5.26e-08,46;CL:0000553,1.97e-07,6;CL:0000556,1.97e-07,6;CL:0000219,7.07e-07,54
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!5.32e-16!48;UBERON:0002390!4.10e-14!45;UBERON:0003061!4.10e-14!45;UBERON:0002405!1.59e-13!70;UBERON:0004177!2.71e-13!29;UBERON:0002370!1.64e-10!23;UBERON:0000974!1.64e-10!23;UBERON:0004807!1.64e-10!23;UBERON:0005058!1.64e-10!23;UBERON:0003351!1.64e-10!23;UBERON:0009113!1.64e-10!23;UBERON:0003295!1.64e-10!23;UBERON:0009722!1.64e-10!23;UBERON:0005562!1.64e-10!23;UBERON:0007690!1.64e-10!23;UBERON:0005057!5.52e-10!51;UBERON:0006562!1.05e-09!24;UBERON:0003408!1.05e-09!24;UBERON:0001557!1.05e-09!24;UBERON:0001042!1.05e-09!24;UBERON:0008814!1.05e-09!24;UBERON:0009145!1.05e-09!24;UBERON:0003081!4.05e-09!88;UBERON:0000065!5.10e-08!41;UBERON:0000926!7.46e-08!193;UBERON:0004120!7.46e-08!193;UBERON:0006603!7.46e-08!193;UBERON:0000072!1.10e-07!27;UBERON:0001004!1.42e-07!42;UBERON:0002530!2.89e-07!65;UBERON:0000077!2.89e-07!97;UBERON:0002368!4.68e-07!60;UBERON:0001041!7.24e-07!92
|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.20e-23,48;UBERON:0002405,7.20e-23,48;UBERON:0004177,6.81e-21,29;UBERON:0005057,6.81e-21,29;UBERON:0002390,2.15e-19,45;UBERON:0003061,2.15e-19,45;UBERON:0002370,3.71e-18,23;UBERON:0000974,3.71e-18,23;UBERON:0004807,3.71e-18,23;UBERON:0005058,3.71e-18,23;UBERON:0003351,3.71e-18,23;UBERON:0009113,3.71e-18,23;UBERON:0003295,3.71e-18,23;UBERON:0009722,3.71e-18,23;UBERON:0005562,3.71e-18,23;UBERON:0007690,3.71e-18,23;UBERON:0000077,5.83e-18,35;UBERON:0006562,3.42e-17,24;UBERON:0003408,3.42e-17,24;UBERON:0001557,3.42e-17,24;UBERON:0001042,3.42e-17,24;UBERON:0008814,3.42e-17,24;UBERON:0009145,3.42e-17,24;UBERON:0000072,9.79e-15,27;UBERON:0000065,1.63e-11,41;UBERON:0001004,4.13e-11,42;UBERON:0007811,7.24e-10,36;UBERON:0001041,1.27e-08,80;UBERON:0000490,2.07e-08,66;UBERON:0002384,5.26e-08,46;UBERON:0003081,5.27e-08,87;UBERON:0003929,5.27e-08,55;UBERON:0002368,1.10e-07,60;UBERON:0000153,1.56e-07,43;UBERON:0005911,1.78e-07,69;UBERON:0002530,1.98e-07,65
|phase1_expression=0,0,0,0,0,0,0,15.1074288426644,36.1827015929784,47.2810343170427,5.65019295144166,3.5099749957948,10.6144452557348,9.17914225399473,2.6648780945253,5.66930748691513,0.699561878128147,17.9813434254195,24.13214031461,24.6145998042858,0.17008658030214,0,0,2.3998863419011,1.37645568640302,0,0,0,0,0,0.443461021310609,0,0,0,0,0.166234645358492,0,9.20769587621197,4.6880120671428,4.71171369576418,11.7646297606203,10.2456822743767,7.76816564849846,0,0,0,0,0,0,0,0,0,43.4556949689537,26.8383992544197,41.0034434953806,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,1.13589289999776,0,1.73918693221007,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,67.3238497482646,0.445326417194474,0.173485326766136,0,0.230615497256059,0,0.23517741427141,0,0,0.86759614151947,0.884610551949874,0.485300549842228,0.220841518460394,0.484875253135222,0,0,0,2.04365644166873,3.11519323715393,0,1.77898317902291,0,0,0,0.173824320192276,0.255715457330331,0,0,0,1.24406970610093,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0.696504333044333,0.205782136407943,0,0.702213187313235,0.772043721344145,0.284163499395593,0.207125772535502,0.234526059981096,0,0,0.393528463494808,0,0.697601834251224,0,0,0.16455984991348,0,0.0810688095458557,0.292399974850665,0,0.134206418760372,0,0,3.96502539580558,0,0,0.232236671860439,0.257734922644187,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0.398282546508734,0,0,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0,0.296452627087149,0,0.196558995113203,0,0,0.241177159752417,0.25462585178142,0.575392274901621,0,0,1.43768206527355,1.11642284300551,1.24815069245824,0.252578877947112,0,0,3.32555742299888,0.37898282354097,0.162964976442026,0,0,0,0.238043640886014,0,0,0.44292937929755,0.956728611944923,1.14704320301017,1.38147985492716,0.867894351489069,0,0,0.983528546038072,1.37968373152366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0.989820737835213,0,0.242780636154981,0.604647113929502,0,0.295301892880773,0.307435147943927,0,0.363533729477506,0,0.632073515871632,0,0,1.36175842301515,0,0.129358683782755,0.428674070063185,0,0.178368817602071,0,0.304464949114599,0.23467170806371,0,0.220528398054962,0,0.484393280087717,0.0603129249281559,0.238744688006273,0,0.291480836629851,0.18542530201051,3.2465467351592,0.206386867963223,1.48155621895769,0.753473828018764,1.6403307326523,3.20289442489132,14.6181449794716,10.9162132812453,12.2997976685937,0,0.158167996790568,0,0,0,0,0,0.247960367176008,0,0.388844919875379,0,0,0,0,0.194451188344048,0,0,0.117357238645754,0.13020438484395,0,0,0,1.58005560314089,3.24360344464263,6.7789231728786,3.50786222040047,3.22248052201467,4.56967115996909,2.64429988943931,1.47689527174577,0.908698049533329,1.295515713135,1.10908803650525,1.26695244961678,0.577271049841977,1.98690733708667,0,0,0,0,0.19318959403219,0.563047426353546,1.46521299413812,0.428736758158132,0,0,0.460325236507177,0,0,0,0,0.675022500231806,0,0,0,0,0,0,0.486213434136588,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0,0.290692833264657,0,0,0,0.263069711437843,0.135804113845862,0,0,0,0.409231043169689,0,0,0,0.233931608445408,0.214871054048298,0,0,0.927471342481686
|phase1_expression=0,0,0,0,0,0,0,15.1074288426644,36.1827015929784,47.2810343170427,5.65019295144166,3.5099749957948,10.6144452557348,9.17914225399473,2.6648780945253,5.66930748691513,0.699561878128147,17.9813434254195,24.13214031461,24.6145998042858,0.17008658030214,0,0,2.3998863419011,1.37645568640302,0,0,0,0,0,0.443461021310609,0,0,0,0,0.166234645358492,0,9.20769587621197,4.6880120671428,4.71171369576418,11.7646297606203,10.2456822743767,7.76816564849846,0,0,0,0,0,0,0,0,0,43.4556949689537,26.8383992544197,41.0034434953806,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,1.13589289999776,0,1.73918693221007,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,67.3238497482646,0.445326417194474,0.173485326766136,0,0.230615497256059,0,0.23517741427141,0,0,0.86759614151947,0.884610551949874,0.485300549842228,0.220841518460394,0.484875253135222,0,0,0,2.04365644166873,3.11519323715393,0,1.77898317902291,0,0,0,0.173824320192276,0.255715457330331,0,0,0,1.24406970610093,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0.696504333044333,0.205782136407943,0,0.702213187313235,0.772043721344145,0.284163499395593,0.207125772535502,0.234526059981096,0,0,0.393528463494808,0,0.697601834251224,0,0,0.16455984991348,0,0.0810688095458557,0.292399974850665,0,0.134206418760372,0,0,3.96502539580558,0,0,0.232236671860439,0.257734922644187,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0.398282546508734,0,0,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0,0.296452627087149,0,0.196558995113203,0,0,0.241177159752417,0.25462585178142,0.575392274901621,0,0,1.43768206527355,1.11642284300551,1.24815069245824,0.252578877947112,0,0,3.32555742299888,0.37898282354097,0.162964976442026,0,0,0,0.238043640886014,0,0,0.44292937929755,0.956728611944923,1.14704320301017,1.38147985492716,0.867894351489069,0,0,0.983528546038072,1.37968373152366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0.989820737835213,0,0.242780636154981,0.604647113929502,0,0.295301892880773,0.307435147943927,0,0.363533729477506,0,0.632073515871632,0,0,1.36175842301515,0,0.129358683782755,0.428674070063185,0,0.178368817602071,0,0.304464949114599,0.23467170806371,0,0.220528398054962,0,0.484393280087717,0.0603129249281559,0.238744688006273,0,0.291480836629851,0.18542530201051,3.2465467351592,0.206386867963223,1.48155621895769,0.753473828018764,1.6403307326523,3.20289442489132,14.6181449794716,10.9162132812453,12.2997976685937,0,0.158167996790568,0,0,0,0,0,0.247960367176008,0,0.388844919875379,0,0,0,0,0.194451188344048,0,0,0.117357238645754,0.13020438484395,0,0,0,1.58005560314089,3.24360344464263,6.7789231728786,3.50786222040047,3.22248052201467,4.56967115996909,2.64429988943931,1.47689527174577,0.908698049533329,1.295515713135,1.10908803650525,1.26695244961678,0.577271049841977,1.98690733708667,0,0,0,0,0.19318959403219,0.563047426353546,1.46521299413812,0.428736758158132,0,0,0.460325236507177,0,0,0,0,0.675022500231806,0,0,0,0,0,0,0.486213434136588,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0,0.290692833264657,0,0,0,0.263069711437843,0.135804113845862,0,0,0,0.409231043169689,0,0,0,0.233931608445408,0.214871054048298,0,0,0.927471342481686
|short_description=p3@Stat4
|short_description=p3@Stat4
}}
}}

Latest revision as of 04:57, 27 September 2015

Short description:p3@Stat4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Stat4_5end
Coexpression cluster:MCL_coexpression_mm9:2312
Association with transcript: 442bp_to_ENSMUST00000027277, NM_011487, uc007axw.1, uc007axx.1_5end
EntrezGene:Stat4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Stat4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E915.11
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E736.18
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F247.28
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.65
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.51
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E410.61
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E89.18
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.67
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A217.98
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A424.13
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A624.61
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G89.21
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H14.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G911.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H210.25
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H47.77
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A243.46
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I926.84
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A141.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D91.14
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H967.32
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H72.04
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.78
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.24
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I33.97
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B13.33
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C71.38
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G23.25
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F21.48
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H11.64
spleen, neonate N25.CNhs11099.1354-25G33.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C614.62
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C910.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D312.30
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I43.24
thymus, embryo E15.CNhs11005.430-45I26.78
thymus, embryo E16.CNhs11002.456-26C53.51
thymus, embryo E17.CNhs10581.478-18C13.22
thymus, embryo E18.CNhs10595.1273-19G44.57
thymus, neonate N02.CNhs11181.1541-43F82.64
thymus, neonate N03.CNhs11137.2104-43C71.48
thymus, neonate N06.CNhs11197.681-26C40.91
thymus, neonate N07.CNhs11211.713-19D31.30
thymus, neonate N10.CNhs11194.748-24E41.11
thymus, neonate N20.CNhs11186.820-7A21.27
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G21.99
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell1.30e-159
alpha-beta T cell1.30e-159
immature T cell1.30e-159
mature T cell1.30e-159
immature alpha-beta T cell1.30e-159
lymphoid lineage restricted progenitor cell5.35e-1412
CD4-positive, alpha-beta T cell6.57e-148
hematopoietic lineage restricted progenitor cell3.44e-1325
lymphocyte1.02e-1213
common lymphoid progenitor1.02e-1213
T cell2.34e-1211
pro-T cell2.34e-1211
hematopoietic cell3.62e-1232
hematopoietic oligopotent progenitor cell3.62e-1232
hematopoietic stem cell3.62e-1232
hematopoietic multipotent progenitor cell3.62e-1232
thymocyte1.19e-106
double negative thymocyte1.19e-106
naive T cell1.19e-106
double-positive, alpha-beta thymocyte1.19e-106
CD4-positive, alpha-beta thymocyte1.19e-106
naive thymus-derived CD4-positive, alpha-beta T cell1.19e-106
DN4 thymocyte1.19e-106
DN1 thymic pro-T cell1.19e-106
DN2 thymocyte1.19e-106
DN3 thymocyte1.19e-106
immature single positive thymocyte1.19e-106
early T lineage precursor1.19e-106
mature CD4 single-positive thymocyte1.19e-106
resting double-positive thymocyte1.19e-106
double-positive blast1.19e-106
CD69-positive double-positive thymocyte1.19e-106
CD69-positive, CD4-positive single-positive thymocyte1.19e-106
CD4-positive, CD8-intermediate double-positive thymocyte1.19e-106
CD24-positive, CD4 single-positive thymocyte1.19e-106
leukocyte4.09e-0917
nongranular leukocyte4.09e-0917
connective tissue cell5.26e-0846
mesenchymal cell5.26e-0846
megakaryocyte progenitor cell1.97e-076
megakaryocyte1.97e-076
motile cell7.07e-0754

Uber anatomy
Ontology termp-valuen
hemolymphoid system7.20e-2348
immune system7.20e-2348
hemopoietic organ6.81e-2129
immune organ6.81e-2129
hematopoietic system2.15e-1945
blood island2.15e-1945
thymus3.71e-1823
neck3.71e-1823
respiratory system epithelium3.71e-1823
hemolymphoid system gland3.71e-1823
pharyngeal epithelium3.71e-1823
thymic region3.71e-1823
pharyngeal gland3.71e-1823
entire pharyngeal arch endoderm3.71e-1823
thymus primordium3.71e-1823
early pharyngeal endoderm3.71e-1823
mixed endoderm/mesoderm-derived structure5.83e-1835
pharynx3.42e-1724
gland of gut3.42e-1724
upper respiratory tract3.42e-1724
chordate pharynx3.42e-1724
pharyngeal arch system3.42e-1724
pharyngeal region of foregut3.42e-1724
segment of respiratory tract9.79e-1527
respiratory tract1.63e-1141
respiratory system4.13e-1142
craniocervical region7.24e-1036
foregut1.27e-0880
unilaminar epithelium2.07e-0866
connective tissue5.26e-0846
lateral plate mesoderm5.27e-0887
gut epithelium5.27e-0855
endocrine gland1.10e-0760
anterior region of body1.56e-0743
endo-epithelium1.78e-0769
gland1.98e-0765
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:52065530..52065548,%2B&oldid=4293775"