FFCP PHASE1:Hg19::chr12:122216354..122216357,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:122216354..122216357,- | |||
|description=CAGE_peak_at_chr12:122216354..122216357,- | |description=CAGE_peak_at_chr12:122216354..122216357,- | ||
|id=chr12:122216354..122216357,- | |id=chr12:122216354..122216357,- | ||
|ontology_enrichment_celltype=CL:0000738!3.47e-08!140;CL:0000037!4.96e-08!172;CL:0000566!4.96e-08!172;CL:0000988!5.00e-08!182;CL:0002032!2.03e-07!165;CL:0000837!2.03e-07!165 | |ontology_enrichment_celltype=CL:0000738!3.47e-08!140;CL:0000037!4.96e-08!172;CL:0000566!4.96e-08!172;CL:0000988!5.00e-08!182;CL:0002032!2.03e-07!165;CL:0000837!2.03e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000084;9.16e-10;25!CL:0000791;3.35e-07;18!CL:0000789;3.35e-07;18!CL:0002419;3.35e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,6.41e-10,25;CL:0000827,6.41e-10,25;CL:0000838,1.23e-08,52;CL:0000542,1.93e-08,53;CL:0000051,1.93e-08,53;CL:0000791,2.30e-07,18;CL:0000789,2.30e-07,18;CL:0002420,2.30e-07,18;CL:0002419,2.30e-07,18;CL:0000790,2.30e-07,18;CL:0002127,6.80e-07,1;CL:0000914,6.80e-07,1;CL:0000911,6.80e-07,1;CL:0000814,6.80e-07,1;CL:0002042,6.80e-07,1;CL:0002039,6.80e-07,1;CL:0002040,6.80e-07,1;CL:0002041,6.80e-07,1;CL:0000319,7.60e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;3.35e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;4.08e-07;1!DOID:0060061;4.08e-07;1!DOID:8691;4.08e-07;1!DOID:3111;5.26e-07;1!DOID:3603;5.26e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,4.09e-07,1;DOID:0060061,4.09e-07,1;DOID:8691,4.09e-07,1;DOID:3111,4.58e-07,1;DOID:3603,4.58e-07,1;DOID:3030,7.60e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.92e-09!9;UBERON:0001557!3.55e-08!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.59e-09;9!UBERON:0001557;1.59e-09;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.56e-09,9 | |||
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| ||
|short_description=p@chr12:122216354..122216357,- | |short_description=p@chr12:122216354..122216357,- | ||
}} | }} |
Latest revision as of 05:58, 24 July 2015
Short description: | p@chr12:122216354..122216357, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:122216354..122216357, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 6.41e-10 | 25 |
pro-T cell | 6.41e-10 | 25 |
lymphoid lineage restricted progenitor cell | 1.23e-08 | 52 |
lymphocyte | 1.93e-08 | 53 |
common lymphoid progenitor | 1.93e-08 | 53 |
mature alpha-beta T cell | 2.30e-07 | 18 |
alpha-beta T cell | 2.30e-07 | 18 |
immature T cell | 2.30e-07 | 18 |
mature T cell | 2.30e-07 | 18 |
immature alpha-beta T cell | 2.30e-07 | 18 |
innate effector T cell | 6.80e-07 | 1 |
immature NK T cell | 6.80e-07 | 1 |
effector T cell | 6.80e-07 | 1 |
mature NK T cell | 6.80e-07 | 1 |
immature NK T cell stage IV | 6.80e-07 | 1 |
immature NK T cell stage I | 6.80e-07 | 1 |
immature NK T cell stage II | 6.80e-07 | 1 |
immature NK T cell stage III | 6.80e-07 | 1 |
mucus secreting cell | 7.60e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.56e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 4.09e-07 | 1 |
cutaneous T cell lymphoma | 4.09e-07 | 1 |
mycosis fungoides | 4.09e-07 | 1 |
cystadenocarcinoma | 4.58e-07 | 1 |
mucinous cystadenocarcinoma | 4.58e-07 | 1 |
mucinous adenocarcinoma | 7.60e-07 | 1 |