FFCP PHASE1:Hg19::chr12:122287794..122287808,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3242 | |EntrezGene=3242 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5147 | |HGNC=5147 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-97bp_to_ENST00000543869_5end | |association_with_transcript=-97bp_to_ENST00000543869_5end | ||
|cluster_id=chr12:122287794..122287808,- | |||
|description=CAGE_peak_4_at_HPD_5end | |description=CAGE_peak_4_at_HPD_5end | ||
|id=chr12:122287794..122287808,- | |id=chr12:122287794..122287808,- | ||
|ontology_enrichment_celltype=CL:0002057!5.47e-46!42;CL:0000763!2.84e-45!112;CL:0000049!2.84e-45!112;CL:0000766!1.60e-44!76;CL:0000860!1.52e-42!45;CL:0000037!4.46e-38!172;CL:0000566!4.46e-38!172;CL:0000738!1.97e-36!140;CL:0000988!1.69e-35!182;CL:0002194!7.75e-34!63;CL:0000576!7.75e-34!63;CL:0000040!7.75e-34!63;CL:0000559!7.75e-34!63;CL:0002032!8.33e-34!165;CL:0000837!8.33e-34!165;CL:0002009!1.26e-32!65;CL:0000839!6.71e-30!70;CL:0000557!2.12e-29!71;CL:0002087!9.39e-22!119;CL:0000094!1.93e-19!8;CL:0002031!5.41e-19!124;CL:0000775!5.47e-14!3;CL:0000081!5.94e-14!11;CL:0000134!1.46e-13!358;CL:0002320!3.99e-13!365;CL:0000219!1.40e-11!390;CL:0000771!4.00e-10!2;CL:0000048!9.88e-10!430;CL:0000723!1.81e-09!436;CL:0000034!3.95e-09!444;CL:0000784!9.63e-07!3 | |ontology_enrichment_celltype=CL:0002057!5.47e-46!42;CL:0000763!2.84e-45!112;CL:0000049!2.84e-45!112;CL:0000766!1.60e-44!76;CL:0000860!1.52e-42!45;CL:0000037!4.46e-38!172;CL:0000566!4.46e-38!172;CL:0000738!1.97e-36!140;CL:0000988!1.69e-35!182;CL:0002194!7.75e-34!63;CL:0000576!7.75e-34!63;CL:0000040!7.75e-34!63;CL:0000559!7.75e-34!63;CL:0002032!8.33e-34!165;CL:0000837!8.33e-34!165;CL:0002009!1.26e-32!65;CL:0000839!6.71e-30!70;CL:0000557!2.12e-29!71;CL:0002087!9.39e-22!119;CL:0000094!1.93e-19!8;CL:0002031!5.41e-19!124;CL:0000775!5.47e-14!3;CL:0000081!5.94e-14!11;CL:0000134!1.46e-13!358;CL:0002320!3.99e-13!365;CL:0000219!1.40e-11!390;CL:0000771!4.00e-10!2;CL:0000048!9.88e-10!430;CL:0000723!1.81e-09!436;CL:0000034!3.95e-09!444;CL:0000784!9.63e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000771;6.64e-28;2!CL:0000094;4.41e-27;8!CL:0000081;8.37e-20;11!CL:0000775;8.68e-19;3!CL:0000763;1.52e-10;100!CL:0000860;4.18e-09;33!CL:0002057;4.18e-09;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,6.20e-28,2;CL:0000094,4.26e-27,8;CL:0000081,8.17e-20,11;CL:0000763,4.12e-19,108;CL:0000049,4.12e-19,108;CL:0000775,8.69e-19,3;CL:0000037,3.92e-16,168;CL:0000988,3.07e-15,177;CL:0002032,1.51e-14,161;CL:0000837,1.51e-14,161;CL:0000766,1.13e-13,72;CL:0000738,2.22e-10,136;CL:0000860,1.03e-07,42;CL:0002057,1.03e-07,42;CL:0000134,8.46e-07,354;CL:0000473,9.73e-07,48;CL:0000234,9.73e-07,48 | |||
|ontology_enrichment_development_v019=CL:0002057;8.46e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8692;7.02e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.20e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.82e-30!102;UBERON:0003061!1.82e-30!102;UBERON:0002193!3.98e-27!112;UBERON:0002371!1.85e-25!80;UBERON:0001474!2.75e-23!86;UBERON:0002405!1.74e-22!115;UBERON:0004765!5.58e-19!101;UBERON:0001434!5.58e-19!101;UBERON:0002384!1.58e-12!375;UBERON:0002106!2.51e-12!3;UBERON:0004854!2.51e-12!3;UBERON:0009034!2.51e-12!3;UBERON:0002095!2.51e-12!3;UBERON:0004782!2.51e-12!3;UBERON:0003281!2.51e-12!3;UBERON:0009664!2.51e-12!3;UBERON:0002296!2.51e-12!3;UBERON:0005602!2.51e-12!3;UBERON:0001179!2.51e-12!3;UBERON:0006293!2.51e-12!3;UBERON:0003081!1.04e-10!216;UBERON:0002204!2.97e-09!167;UBERON:0004177!4.85e-09!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p4@HPD | |short_description=p4@HPD | ||
}} | }} |
Latest revision as of 23:09, 16 September 2015
Short description: | p4@HPD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HPD_5end |
Coexpression cluster: | NA |
Association with transcript: | -97bp_to_ENST00000543869_5end |
EntrezGene: | HPD |
HGNC: | 5147 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 6.20e-28 | 2 |
granulocyte | 4.26e-27 | 8 |
blood cell | 8.17e-20 | 11 |
myeloid cell | 4.12e-19 | 108 |
common myeloid progenitor | 4.12e-19 | 108 |
neutrophil | 8.69e-19 | 3 |
hematopoietic stem cell | 3.92e-16 | 168 |
hematopoietic cell | 3.07e-15 | 177 |
hematopoietic oligopotent progenitor cell | 1.51e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.51e-14 | 161 |
myeloid leukocyte | 1.13e-13 | 72 |
leukocyte | 2.22e-10 | 136 |
classical monocyte | 1.03e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.03e-07 | 42 |
mesenchymal cell | 8.46e-07 | 354 |
defensive cell | 9.73e-07 | 48 |
phagocyte | 9.73e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.20e-07 | 31 |