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{{DOID
{{DOID
|id=DOID:6496
|name=extraskeletal myxoid chondrosarcoma
|namespace=
|def=
|xref=
|is_a=DOID:4549;;DOID:5861
|synonym="extraskeletal myxoid chondrosarcoma (disorder)" EXACT [SNOMEDCT_2005_07_31:404079008];;"Myxoid extraosseous chondrosarcoma" EXACT [NCI2004_11_17:C27502]
|comment=
|alt_id=
|alt_id=
|disjoint_from=
|comment=OMIM mapping confirmed by DO. [SN].
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=DOID:6496
|is_a=DOID:4549 ;;DOID:5861
|is_obsolete=
|located_in=
|located_in=
|name=extraskeletal myxoid chondrosarcoma
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|subset=
|synonym="extraskeletal myxoid chondrosarcoma (disorder)" EXACT [SNOMEDCT_2005_07_31:404079008];;"Myxoid extraosseous chondrosarcoma" EXACT [NCI2004_11_17:C27502]
|union_of=
|xref=NCI:C27502;;OMIM:612237;;SNOMEDCT_2010_1_31:404079008;;UMLS_CUI:C1275278
}}
}}

Latest revision as of 16:52, 12 September 2014

Name:extraskeletal myxoid chondrosarcoma
Namespace:FANTOM
Xrefs:
links:

NCI:C27502
OMIM:612237
SNOMEDCT_2010_1_31:404079008

UMLS_CUI:C1275278
Synonyms: "extraskeletal myxoid chondrosarcoma (disorder)" EXACT [SNOMEDCT_2005_07_31:404079008]
"Myxoid extraosseous chondrosarcoma" EXACT [NCI2004_11_17:C27502]
Comments:OMIM mapping confirmed by DO. [SN].

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:4549(extraosseous chondrosarcoma),DOID:5861(myxoid chondrosarcoma)



Children


is a:FF:10410-106B5 (extraskeletal myxoid chondrosarcoma cell line:H-EMC-SS)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

  • 10410-106B5 (extraskeletal myxoid chondrosarcoma cell line:H-EMC-SS)

Mouse (Mus musculus)

  • 10410-106B5 (extraskeletal myxoid chondrosarcoma cell line:H-EMC-SS)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:6496 (extraskeletal myxoid chondrosarcoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr3:2140234..2140235,+#_4e3b0226076ee15a17222d139cff8adfp36@CNTN4
5.42e-195FFCP PHASE2:Hg19::chr1:228806586..228806591,+#_4e3b0226076ee15a17222d139cff8adfp@chr1:228806586..228806591, +
5.42e-195FFCP PHASE2:Hg19::chr13:23733790..23733815,-#_4e3b0226076ee15a17222d139cff8adfp@chr13:23733790..23733815, -
5.42e-195FFCP PHASE2:Hg19::chr4:145101707..145101712,+#_4e3b0226076ee15a17222d139cff8adfp@chr4:145101707..145101712, +
5.42e-195FFCP PHASE2:Hg19::chr3:157230582..157230593,+#_4e3b0226076ee15a17222d139cff8adfp@chr3:157230582..157230593, +
5.42e-195FFCP PHASE2:Hg19::chr1:192407901..192407907,-#_4e3b0226076ee15a17222d139cff8adfp@chr1:192407901..192407907, -
5.42e-195FFCP PHASE2:Hg19::chr19:41281630..41281644,+#_4e3b0226076ee15a17222d139cff8adfp6@RAB4B
5.42e-195FFCP PHASE1:Hg19::chr7:18439510..18439521,+#_4e3b0226076ee15a17222d139cff8adfp@chr7:18439510..18439521, +
5.42e-195FFCP PHASE1:Hg19::chr12:79920595..79920605,-#_4e3b0226076ee15a17222d139cff8adfp@chr12:79920595..79920605, -
5.42e-195FFCP PHASE1:Hg19::chr6:152592460..152592465,-#_4e3b0226076ee15a17222d139cff8adfp@chr6:152592460..152592465, -
5.42e-195FFCP PHASE1:Hg19::chr2:175629357..175629367,-#_4e3b0226076ee15a17222d139cff8adfp6@CHRNA1
5.42e-195FFCP PHASE1:Hg19::chr3:157230506..157230511,+#_4e3b0226076ee15a17222d139cff8adfp@chr3:157230506..157230511, +
5.42e-195FFCP PHASE1:Hg19::chr1:192407879..192407891,-#_4e3b0226076ee15a17222d139cff8adfp@chr1:192407879..192407891, -
5.42e-195FFCP PHASE1:Hg19::chr12:46884845..46884851,+#_4e3b0226076ee15a17222d139cff8adfp@chr12:46884845..46884851, +
5.42e-195FFCP PHASE2:Hg19::chr5:128083909..128083918,+#_4e3b0226076ee15a17222d139cff8adfp@chr5:128083909..128083918, +
5.42e-195FFCP PHASE1:Hg19::chr3:2140207..2140208,+#_4e3b0226076ee15a17222d139cff8adfp34@CNTN4
5.42e-195FFCP PHASE1:Hg19::chr1:145471703..145471706,+#_4e3b0226076ee15a17222d139cff8adfp@chr1:145471703..145471706, +
5.42e-195FFCP PHASE1:Hg19::chr13:23733790..23733815,-#_4e3b0226076ee15a17222d139cff8adfp@chr13:23733790..23733815, -
5.42e-195FFCP PHASE1:Hg19::chr12:70351934..70351939,+#_4e3b0226076ee15a17222d139cff8adfp@chr12:70351934..70351939, +
5.42e-195FFCP PHASE2:Hg19::chr7:80080929..80080934,+#_4e3b0226076ee15a17222d139cff8adfp@chr7:80080929..80080934, +
5.42e-195FFCP PHASE2:Hg19::chr2:188420470..188420480,+#_4e3b0226076ee15a17222d139cff8adfp@chr2:188420470..188420480, +
5.42e-195FFCP PHASE1:Hg19::chr6:152589315..152589320,-#_4e3b0226076ee15a17222d139cff8adfp72@SYNE1
5.42e-195FFCP PHASE2:Hg19::chr3:2141888..2141892,-#_4e3b0226076ee15a17222d139cff8adfp@chr3:2141888..2141892, -
5.42e-195FFCP PHASE2:Hg19::chr18:22251696..22251702,-#_4e3b0226076ee15a17222d139cff8adfp@chr18:22251696..22251702, -
5.42e-195FFCP PHASE1:Hg19::chr2:188420455..188420469,+#_4e3b0226076ee15a17222d139cff8adfp@chr2:188420455..188420469, +
5.42e-195FFCP PHASE1:Hg19::chr10:63700076..63700086,+#_4e3b0226076ee15a17222d139cff8adfp@chr10:63700076..63700086, +
5.42e-195FFCP PHASE2:Hg19::chr6:152589396..152589401,-#_4e3b0226076ee15a17222d139cff8adfp68@SYNE1
5.42e-195FFCP PHASE2:Hg19::chr18:74961699..74961708,+#_4e3b0226076ee15a17222d139cff8adfp5@GALR1
5.42e-195FFCP PHASE2:Hg19::chr14:83319766..83319776,-#_4e3b0226076ee15a17222d139cff8adfp@chr14:83319766..83319776, -
5.42e-195FFCP PHASE1:Hg19::chr9:79634044..79634053,-#_4e3b0226076ee15a17222d139cff8adfp@chr9:79634044..79634053, -
5.42e-195FFCP PHASE2:Hg19::chr4:169935485..169935488,-#_4e3b0226076ee15a17222d139cff8adfp@chr4:169935485..169935488, -
5.42e-195FFCP PHASE2:Hg19::chr3:177555440..177555446,-#_4e3b0226076ee15a17222d139cff8adfp@chr3:177555440..177555446, -
5.42e-195FFCP PHASE2:Hg19::chr1:197886803..197886812,+#_4e3b0226076ee15a17222d139cff8adfp7@LHX9
5.42e-195FFCP PHASE2:Hg19::chr19:56047661..56047668,-#_4e3b0226076ee15a17222d139cff8adfp4@SBK2
5.42e-195FFCP PHASE1:Hg19::chr14:83319766..83319776,-#_4e3b0226076ee15a17222d139cff8adfp@chr14:83319766..83319776, -
5.42e-195FFCP PHASE2:Hg19::chr1:154942376..154942386,-#_4e3b0226076ee15a17222d139cff8adfp@chr1:154942376..154942386, -
5.42e-195FFCP PHASE1:Hg19::chr18:22251681..22251685,-#_4e3b0226076ee15a17222d139cff8adfp@chr18:22251681..22251685, -
5.42e-195FFCP PHASE2:Hg19::chr2:175614951..175614956,-#_4e3b0226076ee15a17222d139cff8adfp@chr2:175614951..175614956, -
5.42e-195FFCP PHASE2:Hg19::chr8:107074411..107074421,+#_4e3b0226076ee15a17222d139cff8adfp@chr8:107074411..107074421, +
5.42e-195FFCP PHASE2:Hg19::chr3:1577559..1577577,-#_4e3b0226076ee15a17222d139cff8adfp@chr3:1577559..1577577, -
5.42e-195FFCP PHASE1:Hg19::chr18:74535969..74535980,-#_4e3b0226076ee15a17222d139cff8adfp@chr18:74535969..74535980, -
5.42e-195FFCP PHASE2:Hg19::chr2:206927691..206927699,-#_4e3b0226076ee15a17222d139cff8adfp@chr2:206927691..206927699, -
5.42e-195FFCP PHASE2:Hg19::chr6:150735014..150735021,-#_4e3b0226076ee15a17222d139cff8adfp@chr6:150735014..150735021, -
5.42e-195FFCP PHASE2:Hg19::chr3:2139856..2139863,+#_4e3b0226076ee15a17222d139cff8adfp@chr3:2139856..2139863, +
5.42e-195FFCP PHASE1:Hg19::chr3:1577545..1577547,-#_4e3b0226076ee15a17222d139cff8adfp@chr3:1577545..1577547, -
5.42e-195FFCP PHASE1:Hg19::chr2:206927652..206927658,-#_4e3b0226076ee15a17222d139cff8adfp@chr2:206927652..206927658, -
5.42e-195FFCP PHASE1:Hg19::chr9:18993581..18993586,-#_4e3b0226076ee15a17222d139cff8adfp@chr9:18993581..18993586, -
5.42e-195FFCP PHASE2:Hg19::chr9:13006722..13006729,-#_4e3b0226076ee15a17222d139cff8adfp@chr9:13006722..13006729, -
5.42e-195FFCP PHASE2:Hg19::chr4:139817573..139817580,-#_4e3b0226076ee15a17222d139cff8adfp@chr4:139817573..139817580, -
5.42e-195FFCP PHASE2:Hg19::chr12:89917192..89917200,-#_4e3b0226076ee15a17222d139cff8adfp@chr12:89917192..89917200, -
5.42e-195FFCP PHASE1:Hg19::chr3:2141982..2141990,+#_4e3b0226076ee15a17222d139cff8adfp16@CNTN4
5.42e-195FFCP PHASE1:Hg19::chr3:106921055..106921063,-#_4e3b0226076ee15a17222d139cff8adfp@chr3:106921055..106921063, -
5.42e-195FFCP PHASE1:Hg19::chr1:154942216..154942223,-#_4e3b0226076ee15a17222d139cff8adfp@chr1:154942216..154942223, -
5.42e-195FFCP PHASE1:Hg19::chr12:71031310..71031321,-#_4e3b0226076ee15a17222d139cff8adfp14@PTPRB
5.42e-195FFCP PHASE2:Hg19::chr2:190023542..190023552,-#_4e3b0226076ee15a17222d139cff8adfp@chr2:190023542..190023552, -
5.42e-195FFCP PHASE2:Hg19::chr10:54786954..54786965,-#_4e3b0226076ee15a17222d139cff8adfp@chr10:54786954..54786965, -
5.42e-195FFCP PHASE1:Hg19::chr3:99508248..99508255,-#_4e3b0226076ee15a17222d139cff8adfp@chr3:99508248..99508255, -
5.42e-195FFCP PHASE1:Hg19::chr3:157206082..157206087,-#_4e3b0226076ee15a17222d139cff8adfp@chr3:157206082..157206087, -
5.42e-195FFCP PHASE1:Hg19::chr12:89917192..89917200,-#_4e3b0226076ee15a17222d139cff8adfp@chr12:89917192..89917200, -
5.42e-195FFCP PHASE2:Hg19::chr7:18439468..18439477,+#_4e3b0226076ee15a17222d139cff8adfp@chr7:18439468..18439477, +
5.42e-195FFCP PHASE2:Hg19::chr15:96181433..96181441,-#_4e3b0226076ee15a17222d139cff8adfp@chr15:96181433..96181441, -
5.42e-195FFCP PHASE2:Hg19::chrX:135338329..135338337,-#_4e3b0226076ee15a17222d139cff8adfp@chrX:135338329..135338337, -
5.42e-195FFCP PHASE1:Hg19::chr1:113250450..113250457,-#_4e3b0226076ee15a17222d139cff8adfp18@RHOC
5.42e-195FFCP PHASE2:Hg19::chr7:79999046..79999051,+#_4e3b0226076ee15a17222d139cff8adfp41@CD36
5.42e-195FFCP PHASE2:Hg19::chr12:79920595..79920605,-#_4e3b0226076ee15a17222d139cff8adfp@chr12:79920595..79920605, -
5.42e-195FFCP PHASE1:Hg19::chr3:2141759..2141771,-#_4e3b0226076ee15a17222d139cff8adfp@chr3:2141759..2141771, -
5.42e-195FFCP PHASE2:Hg19::chr14:87689429..87689432,-#_4e3b0226076ee15a17222d139cff8adfp@chr14:87689429..87689432, -
5.42e-195FFCP PHASE2:Hg19::chr1:197890538..197890548,+#_4e3b0226076ee15a17222d139cff8adfp@chr1:197890538..197890548, +
5.42e-195FFCP PHASE1:Hg19::chr14:87689429..87689432,-#_4e3b0226076ee15a17222d139cff8adfp@chr14:87689429..87689432, -
5.42e-195FFCP PHASE2:Hg19::chr6:152589291..152589303,-#_4e3b0226076ee15a17222d139cff8adfp38@SYNE1
5.42e-195FFCP PHASE2:Hg19::chr5:109694595..109694599,+#_4e3b0226076ee15a17222d139cff8adfp@chr5:109694595..109694599, +
5.42e-195FFCP PHASE2:Hg19::chr3:2141785..2141802,-#_4e3b0226076ee15a17222d139cff8adfp@chr3:2141785..2141802, -
5.42e-195FFCP PHASE2:Hg19::chr12:70351934..70351939,+#_4e3b0226076ee15a17222d139cff8adfp@chr12:70351934..70351939, +
5.42e-195FFCP PHASE1:Hg19::chr1:197889977..197890013,+#_4e3b0226076ee15a17222d139cff8adfp@chr1:197889977..197890013, +
5.42e-195FFCP PHASE1:Hg19::chr18:22253588..22253590,+#_4e3b0226076ee15a17222d139cff8adfp@chr18:22253588..22253590, +
5.42e-195FFCP PHASE1:Hg19::chr15:96181433..96181441,-#_4e3b0226076ee15a17222d139cff8adfp@chr15:96181433..96181441, -
5.42e-195FFCP PHASE1:Hg19::chr11:30257128..30257133,-#_4e3b0226076ee15a17222d139cff8adfp@chr11:30257128..30257133, -
5.42e-195FFCP PHASE1:Hg19::chr6:150735340..150735361,+#_4e3b0226076ee15a17222d139cff8adfp@chr6:150735340..150735361, +
5.42e-195FFCP PHASE1:Hg19::chr4:72885984..72885997,-#_4e3b0226076ee15a17222d139cff8adfp@chr4:72885984..72885997, -
5.42e-195FFCP PHASE2:Hg19::chr9:18504821..18504825,+#_4e3b0226076ee15a17222d139cff8adfp@chr9:18504821..18504825, +
5.42e-195FFCP PHASE2:Hg19::chr3:163194047..163194081,-#_4e3b0226076ee15a17222d139cff8adfp@chr3:163194047..163194081, -
5.42e-195FFCP PHASE1:Hg19::chr3:127441545..127441550,-#_4e3b0226076ee15a17222d139cff8adfp58@MGLL
5.42e-195FFCP PHASE1:Hg19::chr10:33244066..33244083,-#_4e3b0226076ee15a17222d139cff8adfp@chr10:33244066..33244083, -
5.42e-195FFCP PHASE1:Hg19::chr6:109702786..109702795,-#_4e3b0226076ee15a17222d139cff8adfp21@CD164
5.42e-195FFCP PHASE2:Hg19::chr3:157230599..157230604,+#_4e3b0226076ee15a17222d139cff8adfp@chr3:157230599..157230604, +
5.42e-195FFCP PHASE1:Hg19::chr7:18439523..18439524,+#_4e3b0226076ee15a17222d139cff8adfp@chr7:18439523..18439524, +
5.42e-195FFCP PHASE1:Hg19::chr12:79920639..79920642,-#_4e3b0226076ee15a17222d139cff8adfp@chr12:79920639..79920642, -
5.42e-195FFCP PHASE1:Hg19::chr12:108955070..108955084,-#_4e3b0226076ee15a17222d139cff8adfp16@SART3
5.42e-195FFCP PHASE2:Hg19::chr10:63700017..63700022,+#_4e3b0226076ee15a17222d139cff8adfp@chr10:63700017..63700022, +
5.42e-195FFCP PHASE2:Hg19::chr1:198595872..198595878,+#_4e3b0226076ee15a17222d139cff8adfp@chr1:198595872..198595878, +
5.42e-195FFCP PHASE1:Hg19::chr3:157230582..157230593,+#_4e3b0226076ee15a17222d139cff8adfp@chr3:157230582..157230593, +
5.42e-195FFCP PHASE1:Hg19::chr1:192407901..192407907,-#_4e3b0226076ee15a17222d139cff8adfp@chr1:192407901..192407907, -
5.42e-195FFCP PHASE1:Hg19::chr19:41281630..41281644,+#_4e3b0226076ee15a17222d139cff8adfp6@RAB4B
5.42e-195FFCP PHASE2:Hg19::chr5:128083931..128083952,+#_4e3b0226076ee15a17222d139cff8adfp@chr5:128083931..128083952, +
5.42e-195FFCP PHASE1:Hg19::chr4:169935453..169935460,-#_4e3b0226076ee15a17222d139cff8adfp@chr4:169935453..169935460, -
5.42e-195FFCP PHASE1:Hg19::chr3:2140234..2140235,+#_4e3b0226076ee15a17222d139cff8adfp36@CNTN4
5.42e-195FFCP PHASE1:Hg19::chr1:228806586..228806591,+#_4e3b0226076ee15a17222d139cff8adfp@chr1:228806586..228806591, +
5.42e-195FFCP PHASE1:Hg19::chr12:70351971..70351975,+#_4e3b0226076ee15a17222d139cff8adfp@chr12:70351971..70351975, +
5.42e-195FFCP PHASE1:Hg19::chr3:2141851..2141858,-#_4e3b0226076ee15a17222d139cff8adfp@chr3:2141851..2141858, -
5.42e-195FFCP PHASE2:Hg19::chrX:591202..591211,-#_4e3b0226076ee15a17222d139cff8adfp@chrX:591202..591211, -

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