FFCP PHASE1:Hg19::chr12:14818557..14818582,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-6bp_to_ENST00000501178_5end | |association_with_transcript=-6bp_to_ENST00000501178_5end | ||
|cluster_id=chr12:14818557..14818582,+ | |||
|description=CAGE_peak_1_at_ENST00000501178_5end | |description=CAGE_peak_1_at_ENST00000501178_5end | ||
|id=chr12:14818557..14818582,+ | |id=chr12:14818557..14818582,+ | ||
|ontology_enrichment_celltype=CL:0002368!2.07e-16!13;CL:0002076!8.39e-13!43;CL:0002202!2.21e-12!9;CL:0002632!2.21e-12!9;CL:0000223!3.18e-10!59;CL:0000066!1.17e-08!254;CL:0000068!3.76e-08!3;CL:0000069!3.76e-08!3;CL:0000307!3.76e-08!3;CL:0000377!3.76e-08!3;CL:0002328!4.03e-08!3 | |ontology_enrichment_celltype=CL:0002368!2.07e-16!13;CL:0002076!8.39e-13!43;CL:0002202!2.21e-12!9;CL:0002632!2.21e-12!9;CL:0000223!3.18e-10!59;CL:0000066!1.17e-08!254;CL:0000068!3.76e-08!3;CL:0000069!3.76e-08!3;CL:0000307!3.76e-08!3;CL:0000377!3.76e-08!3;CL:0002328!4.03e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000307;3.49e-20;3!CL:0002202;3.42e-18;9!CL:0002632;3.42e-18;9!CL:0002368;1.32e-17;13!CL:0002076;1.77e-10;42!CL:0002328;6.26e-10;3!CL:0000167;1.44e-07;1!CL:0000164;1.44e-07;1!CL:0000502;1.44e-07;1!CL:0000172;1.44e-07;1!CL:0000173;1.44e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,3.86e-20,3;CL:0000069,3.86e-20,3;CL:0000307,3.86e-20,3;CL:0000377,3.86e-20,3;CL:0002202,3.62e-18,9;CL:0002632,3.62e-18,9;CL:0002368,1.46e-17,13;CL:0002076,7.95e-14,42;CL:0000223,1.43e-11,58;CL:0002328,6.27e-10,3;CL:0000066,4.36e-09,253;CL:0000167,1.75e-07,1;CL:0000164,1.75e-07,1;CL:0000502,1.75e-07,1;CL:0000172,1.75e-07,1;CL:0000173,1.75e-07,1;CL:0002351,1.75e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000377;3.49e-20;3!CL:0002351;1.44e-07;1 | |||
|ontology_enrichment_disease=DOID:1749!6.96e-15!14;DOID:305!7.95e-10!106;DOID:162!3.90e-09!235;DOID:14566!1.05e-08!239;DOID:0050686!1.89e-07!137;DOID:0050687!2.81e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.36e-22;14!DOID:4362;3.68e-12;5!DOID:0050619;4.50e-08;1!DOID:1357;4.50e-08;1!DOID:4430;1.44e-07;1!DOID:5409;1.87e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.33e-22,14;DOID:4362,3.83e-12,5;DOID:305,7.18e-11,106;DOID:0050687,1.93e-08,143;DOID:0050619,4.07e-08,1;DOID:1357,4.07e-08,1;DOID:162,6.24e-08,235;DOID:14566,1.11e-07,239;DOID:5409,1.70e-07,4;DOID:4430,1.75e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000065!3.40e-13!53;UBERON:0001004!6.61e-13!72;UBERON:0000072!2.75e-11!46;UBERON:0000974!6.20e-10!10;UBERON:0007196!1.04e-09!14;UBERON:0001558!1.04e-09!14;UBERON:0006562!6.34e-09!11;UBERON:0004815!4.03e-08!3;UBERON:0002031!4.03e-08!3;UBERON:0008814!7.11e-08!15;UBERON:0004119!7.61e-08!169;UBERON:0000925!7.61e-08!169;UBERON:0006595!7.61e-08!169;UBERON:0005178!2.90e-07!34;UBERON:0002224!2.90e-07!34;UBERON:0001042!3.36e-07!10;UBERON:0009145!3.36e-07!10;UBERON:0005181!5.61e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0007196;7.71e-11;15!UBERON:0001558;7.71e-11;15!UBERON:0000002;3.22e-10;6!UBERON:0001560;3.22e-10;6!UBERON:0004815;6.26e-10;3!UBERON:0002031;6.26e-10;3!UBERON:0003126;5.96e-09;7!UBERON:0001005;5.96e-09;7!UBERON:0005178;2.17e-08;34!UBERON:0002224;2.17e-08;34!UBERON:0001764;4.50e-08;1!UBERON:0001825;4.50e-08;1!UBERON:0005181;5.75e-08;35!UBERON:0000072;7.90e-08;37!UBERON:0003343;1.33e-07;4!UBERON:0004785;1.33e-07;4!UBERON:0000065;5.45e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007196,7.96e-11,15;UBERON:0001558,7.96e-11,15;UBERON:0001004,2.04e-10,74;UBERON:0000002,3.33e-10,6;UBERON:0001560,3.33e-10,6;UBERON:0004815,6.27e-10,3;UBERON:0002031,6.27e-10,3;UBERON:0003126,6.21e-09,7;UBERON:0001005,6.21e-09,7;UBERON:0005178,1.22e-08,34;UBERON:0002224,1.22e-08,34;UBERON:0005181,2.27e-08,35;UBERON:0000065,2.84e-08,54;UBERON:0001764,4.07e-08,1;UBERON:0001825,4.07e-08,1;UBERON:0000072,9.99e-08,47;UBERON:0008947,1.22e-07,38;UBERON:0003258,1.22e-07,38;UBERON:0003343,1.23e-07,4;UBERON:0004785,1.23e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,3.31326510656075,3.69754010166788,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503946384596579,0.141775097242386,0,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0.650060246036521,0,0,0,0,0,0.107420244868274,0,0,0,0.826424576804891,0.384380134730212,1.40373983744043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50177493086331,2.68120910214315,2.17781969722645,0.282431402330337,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0.185803175125719,0.144269212976445,0,0.159426272728822,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,2.00598091699461,0,0,0,0,0,0,3.00533503561846,0,1.47787785689595,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.57587896598948,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,1.11538995422883,0,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0.158936578980379,1.47698645169619,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56531695145672,0,0,0,0,0,0.150323419414493,0,0,0,0,0,1.70765727617876,0,0.694238953340524,0.0979923974143777,2.43765778425127,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0.391102765469606,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0.2249738915515,0.77380195455795,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,1.46151118057075,0,0,0,0,0,3.92635240625586,0,0,0,0,0,0,0.138348634936231,0.124980407962107,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344429959321631,0,0.184105950251841,0.139879507719444,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64998839952769,4.71878893390961,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6830109804315,0,0,0,0,0.443511850813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0.671132590786754,0.098150233615243,0,0,0,0,0,2.80727356154527,0,4.63788354032517,0.45178432815584,0,1.66059127923341,0,0,4.23285566725371,0,1.17838273550813,0,0,0,0,0.187967835959707,0,0,2.32120120187355,5.99921281916676,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,2.57647573942014,5.35928260312357,0,0,0.426467963801962,0,0.193766729508018,0.806971285846153,0.560659312903067,0.0636471582781649,0,1.08858373948481,0.342233301085281,0.673520530145875,0.860666464712116,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,3.31326510656075,3.69754010166788,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503946384596579,0.141775097242386,0,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0.650060246036521,0,0,0,0,0,0.107420244868274,0,0,0,0.826424576804891,0.384380134730212,1.40373983744043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50177493086331,2.68120910214315,2.17781969722645,0.282431402330337,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0.185803175125719,0.144269212976445,0,0.159426272728822,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,2.00598091699461,0,0,0,0,0,0,3.00533503561846,0,1.47787785689595,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.57587896598948,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,1.11538995422883,0,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0.158936578980379,1.47698645169619,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56531695145672,0,0,0,0,0,0.150323419414493,0,0,0,0,0,1.70765727617876,0,0.694238953340524,0.0979923974143777,2.43765778425127,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0.391102765469606,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0.2249738915515,0.77380195455795,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,1.46151118057075,0,0,0,0,0,3.92635240625586,0,0,0,0,0,0,0.138348634936231,0.124980407962107,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344429959321631,0,0.184105950251841,0.139879507719444,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64998839952769,4.71878893390961,0.183428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6830109804315,0,0,0,0,0.443511850813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0.671132590786754,0.098150233615243,0,0,0,0,0,2.80727356154527,0,4.63788354032517,0.45178432815584,0,1.66059127923341,0,0,4.23285566725371,0,1.17838273550813,0,0,0,0,0.187967835959707,0,0,2.32120120187355,5.99921281916676,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,2.57647573942014,5.35928260312357,0,0,0.426467963801962,0,0.193766729508018,0.806971285846153,0.560659312903067,0.0636471582781649,0,1.08858373948481,0.342233301085281,0.673520530145875,0.860666464712116,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENST00000501178 | |short_description=p1@ENST00000501178 | ||
}} | }} |
Latest revision as of 07:04, 24 July 2015
Short description: | p1@ENST00000501178 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000501178_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_ENST00000501178_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 3.86e-20 | 3 |
branched duct epithelial cell | 3.86e-20 | 3 |
tracheal epithelial cell | 3.86e-20 | 3 |
tracheoblast | 3.86e-20 | 3 |
epithelial cell of tracheobronchial tree | 3.62e-18 | 9 |
epithelial cell of lower respiratory tract | 3.62e-18 | 9 |
respiratory epithelial cell | 1.46e-17 | 13 |
endo-epithelial cell | 7.95e-14 | 42 |
endodermal cell | 1.43e-11 | 58 |
bronchial epithelial cell | 6.27e-10 | 3 |
epithelial cell | 4.36e-09 | 253 |
peptide hormone secreting cell | 1.75e-07 | 1 |
enteroendocrine cell | 1.75e-07 | 1 |
type D enteroendocrine cell | 1.75e-07 | 1 |
somatostatin secreting cell | 1.75e-07 | 1 |
pancreatic D cell | 1.75e-07 | 1 |
progenitor cell of endocrine pancreas | 1.75e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
tracheobronchial tree | 7.96e-11 | 15 |
lower respiratory tract | 7.96e-11 | 15 |
respiratory system | 2.04e-10 | 74 |
uterine cervix | 3.33e-10 | 6 |
neck of organ | 3.33e-10 | 6 |
lower respiratory tract epithelium | 6.27e-10 | 3 |
epithelium of bronchus | 6.27e-10 | 3 |
trachea | 6.21e-09 | 7 |
respiratory airway | 6.21e-09 | 7 |
thoracic cavity element | 1.22e-08 | 34 |
thoracic cavity | 1.22e-08 | 34 |
thoracic segment organ | 2.27e-08 | 35 |
respiratory tract | 2.84e-08 | 54 |
maxillary sinus | 4.07e-08 | 1 |
paranasal sinus | 4.07e-08 | 1 |
segment of respiratory tract | 9.99e-08 | 47 |
respiratory primordium | 1.22e-07 | 38 |
endoderm of foregut | 1.22e-07 | 38 |
mucosa of oral region | 1.23e-07 | 4 |
respiratory system mucosa | 1.23e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.33e-22 | 14 |
cervical cancer | 3.83e-12 | 5 |
carcinoma | 7.18e-11 | 106 |
cell type cancer | 1.93e-08 | 143 |
paranasal sinus cancer | 4.07e-08 | 1 |
maxillary sinus cancer | 4.07e-08 | 1 |
cancer | 6.24e-08 | 235 |
disease of cellular proliferation | 1.11e-07 | 239 |
lung small cell carcinoma | 1.70e-07 | 4 |
somatostatinoma | 1.75e-07 | 1 |