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FFCP PHASE1:Mm9::chr17:90855283..90855366,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18189
|EntrezGene=18189
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=P0DI97
|UniProt=P0DI97
|association_with_transcript=-57bp_to_ENSMUST00000172466_5end
|association_with_transcript=-57bp_to_ENSMUST00000172466_5end
|cluster_id=chr17:90855283..90855366,-
|description=CAGE_peak_2_at_Nrxn1_5end
|description=CAGE_peak_2_at_Nrxn1_5end
|id=chr17:90855283..90855366,-
|id=chr17:90855283..90855366,-
|ontology_enrichment_celltype=CL:0000540!1.65e-13!33;CL:0000047!1.65e-13!33;CL:0000031!1.65e-13!33;CL:0000404!1.65e-13!33;CL:0000117!3.75e-13!23;CL:0000337!3.75e-13!23;CL:0002319!6.57e-10!43;CL:0000221!1.06e-09!44;CL:0000133!1.06e-09!44;CL:0000393!2.84e-09!39;CL:0000211!2.84e-09!39
|ontology_enrichment_celltype=CL:0000540!1.65e-13!33;CL:0000047!1.65e-13!33;CL:0000031!1.65e-13!33;CL:0000404!1.65e-13!33;CL:0000117!3.75e-13!23;CL:0000337!3.75e-13!23;CL:0002319!6.57e-10!43;CL:0000221!1.06e-09!44;CL:0000133!1.06e-09!44;CL:0000393!2.84e-09!39;CL:0000211!2.84e-09!39
|ontology_enrichment_celltype_v019_2=CL:0000540,5.13e-16,33;CL:0000047,5.13e-16,33;CL:0000031,5.13e-16,33;CL:0000404,5.13e-16,33;CL:0000117,7.64e-16,23;CL:0000337,7.64e-16,23;CL:0000393,1.16e-11,39;CL:0000211,1.16e-11,39;CL:0002319,1.09e-10,43;CL:0000221,3.55e-10,44;CL:0000133,3.55e-10,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.07e-25!73;UBERON:0005743!2.07e-25!73;UBERON:0000073!6.99e-25!75;UBERON:0001016!6.99e-25!75;UBERON:0001049!5.83e-22!52;UBERON:0005068!5.83e-22!52;UBERON:0006241!5.83e-22!52;UBERON:0007135!5.83e-22!52;UBERON:0002346!7.94e-22!71;UBERON:0003075!7.94e-22!71;UBERON:0007284!7.94e-22!71;UBERON:0000955!1.47e-20!50;UBERON:0006238!1.47e-20!50;UBERON:0002616!5.46e-20!49;UBERON:0000033!9.20e-20!63;UBERON:0004121!1.31e-19!102;UBERON:0000924!1.31e-19!102;UBERON:0006601!1.31e-19!102;UBERON:0002020!2.50e-19!34;UBERON:0003056!1.53e-18!49;UBERON:0003080!5.10e-17!40;UBERON:0002780!1.99e-16!39;UBERON:0001890!1.99e-16!39;UBERON:0006240!1.99e-16!39;UBERON:0002791!4.06e-16!29;UBERON:0003528!4.06e-16!29;UBERON:0001893!4.06e-16!29;UBERON:0000956!4.67e-12!21;UBERON:0001869!4.67e-12!21;UBERON:0000203!4.67e-12!21;UBERON:0000153!1.31e-10!94;UBERON:0002619!2.46e-10!17;UBERON:0007811!1.14e-09!86;UBERON:0002021!1.27e-08!10;UBERON:0000411!1.27e-08!10;UBERON:0001950!1.27e-08!10;UBERON:0000468!6.83e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.96e-29,73;UBERON:0001016,6.07e-28,75;UBERON:0002346,6.12e-28,64;UBERON:0003075,6.12e-28,64;UBERON:0007284,6.12e-28,64;UBERON:0000073,8.29e-27,54;UBERON:0001049,3.55e-25,52;UBERON:0005068,3.55e-25,52;UBERON:0006241,3.55e-25,52;UBERON:0007135,3.55e-25,52;UBERON:0004121,2.92e-23,95;UBERON:0000924,2.92e-23,95;UBERON:0006601,2.92e-23,95;UBERON:0002020,2.12e-22,34;UBERON:0010371,1.42e-21,73;UBERON:0000955,2.96e-21,47;UBERON:0006238,2.96e-21,47;UBERON:0002616,1.41e-20,46;UBERON:0003056,3.70e-20,49;UBERON:0003080,7.94e-19,40;UBERON:0003528,1.82e-18,29;UBERON:0002791,1.82e-18,29;UBERON:0001893,1.82e-18,29;UBERON:0002780,4.11e-18,39;UBERON:0001890,4.11e-18,39;UBERON:0006240,4.11e-18,39;UBERON:0010314,2.85e-14,92;UBERON:0000956,1.77e-13,21;UBERON:0001869,1.77e-13,21;UBERON:0000203,1.77e-13,21;UBERON:0002619,2.38e-11,17;UBERON:0002021,2.91e-10,10;UBERON:0000411,2.91e-10,10;UBERON:0001950,2.91e-10,10;UBERON:0003076,6.50e-07,12;UBERON:0003057,6.50e-07,12
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0.315462165358238,0.411343300817216,0.84877930359606,12.5013636522073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0.219686182734472,0.388859798148567,0.279972843250725,1.43752564364972,0,0,0,0,0.286533439938757,0,25.4918740683093,35.4423956112262,24.719424736741,0.677689064138264,0,0.449949858640699,0,0,0,0,12.4427534770173,8.77538599155989,9.04397333810943,27.4224945027651,40.4189429941453,44.5866509142433,17.9231030804102,22.9804696652505,23.1243350098716,35.7524546638526,31.7965523840424,23.6076455037047,13.2657083223494,32.8175423450759,8.37548997004143,11.2552522006336,16.9606055032259,52.7385167997865,63.3553979556008,43.431070877295,0.075726193333184,0.755715601067855,0,0,0,0,0,0,0.702222100658759,0,0,0,0.281686839553361,0,0,0,0,0,0.505524445014783,0.5709193985953,0,0,1.73485326766136,0,0.922461989024234,0.301445281105245,0.823120949949934,0,0,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,72.6096376588637,110.168967783877,0,0,0,0,27.7112682898922,26.992535566299,53.780062704306,134.36619950863,141.154932446342,34.9083914860061,44.2918648174978,1.32391173005411,0.248813941220186,0,0.631325567659422,4.94457683258274,4.36813998423599,7.56260945182467,3.61691562805716,4.69451844144162,6.53379973452734,4.8724896771059,3.3631438196072,1.07783996466421,3.78212160335639,5.10258260075452,7.01426343768239,4.72680323683516,3.48252166522167,2.67516777330327,1.39323986772945,0,0,0,0.621377317606506,2.11073453982987,0.900310307305074,1.42046841351126,0.787056926989615,0.617068451549513,0,0,0.233530684734339,0.329119699826961,0,0.0810688095458557,0,0.219550115291051,0,79.6998905058042,73.0622747892919,0,0,2.77274725695804,0.696710015581316,0.515469845288373,0.403367049246685,0,0,0,0.329397909448022,0.251335208800269,0,0.58489226135736,0,0,0,3.03468641524931,2.28497025219458,3.38123207019241,2.44381593414377,1.55161989734101,1.40271639780637,0.379419222745544,0,0,0,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,1.13694847062291,0.814824882210129,0.509235257325564,0.938760993154008,0.335012514883631,0,0,0.315270288212382,1.10732344824387,0.956728611944923,0.327726629431476,0.172684981865896,0.289298117163023,0,0,0,0.275936746304732,11.0779907091576,8.90808818100744,0,0,6.62567260774139,8.98009111882268,7.32439552291516,3.10659437338318,2.89638276307112,1.13230612315533,1.61924280669958,2.92255857911312,1.18586333383957,21.5285282002611,0,0.890328018336276,0.977321756121456,0,0,3.39892890616974,2.41858845571801,0.188605079755898,0.590603785761546,0.922305443831782,0.258428293168221,0.363533729477506,0.712994756769443,0,0,0,0,3.42116078659489,0.388076051348264,3.21505552547388,4.78818630834139,4.28085162244969,5.75921572107423,0.608929898229199,0,0,0,0.16488625294148,0,0.663442174209714,0,0.164140899745061,0,14.0923229527987,0.341741761595705,20.6386867963223,6.48180845793991,0.376736914009382,0.136694227721025,0.457556346413045,0,0,0,0,1.10717597753397,2.84647253977588,1.51207477150522,1.04544148007234,0.655087691238533,0.809186078308924,0.661227645802687,0,0,0,0,0.897099276263873,0.330916980914195,1.55560950675238,0.387479470433193,1.18269287843545,0.117357238645754,0.911430693907651,0.209718688851422,0,0,0,0.405450430580328,1.33524244314275,0.77952493786677,0.358053391334963,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0,0.187682475451182,0,1.92931541171159,0,142.882216182118,177.68554129177,179.316295706531,213.269799288516,168.530299863578,198.668595013491,184.281142563283,150.40728187689,169.475260960092,156.881374460801,1.14166082342594,8.77854721482268,9.90254913373978,14.5864030240976,5.8691685535835,8.82448840560068,6.22290837844523,9.06554251851134,8.66481865897901,12.8875577999537,12.4204856946217,13.2038438970253,7.95952813494,9.02754648908657,8.2132720606527,7.62069906052918,9.96605203125757,7.33055037762079,9.89006161927936,8.24313952752625,12.6861623382604,6.92155644021416,9.53744759789284,10.174249164263,11.387235030255,10.1537529470012,9.87811053512972,7.3659519202596,10.0495044245938,10.1005608898393,9.96534152243063,6.69830480153832,8.18462086339379,10.8455788830176,12.1531164918119,17.7365510335942,11.2287172053796,8.59484216193193,5.7386499620653,2.20591419119516,1.15933917810211
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0.315462165358238,0.411343300817216,0.84877930359606,12.5013636522073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0.219686182734472,0.388859798148567,0.279972843250725,1.43752564364972,0,0,0,0,0.286533439938757,0,25.4918740683093,35.4423956112262,24.719424736741,0.677689064138264,0,0.449949858640699,0,0,0,0,12.4427534770173,8.77538599155989,9.04397333810943,27.4224945027651,40.4189429941453,44.5866509142433,17.9231030804102,22.9804696652505,23.1243350098716,35.7524546638526,31.7965523840424,23.6076455037047,13.2657083223494,32.8175423450759,8.37548997004143,11.2552522006336,16.9606055032259,52.7385167997865,63.3553979556008,43.431070877295,0.075726193333184,0.755715601067855,0,0,0,0,0,0,0.702222100658759,0,0,0,0.281686839553361,0,0,0,0,0,0.505524445014783,0.5709193985953,0,0,1.73485326766136,0,0.922461989024234,0.301445281105245,0.823120949949934,0,0,0,0,0.161766849947409,0.220841518460394,0.484875253135222,0,72.6096376588637,110.168967783877,0,0,0,0,27.7112682898922,26.992535566299,53.780062704306,134.36619950863,141.154932446342,34.9083914860061,44.2918648174978,1.32391173005411,0.248813941220186,0,0.631325567659422,4.94457683258274,4.36813998423599,7.56260945182467,3.61691562805716,4.69451844144162,6.53379973452734,4.8724896771059,3.3631438196072,1.07783996466421,3.78212160335639,5.10258260075452,7.01426343768239,4.72680323683516,3.48252166522167,2.67516777330327,1.39323986772945,0,0,0,0.621377317606506,2.11073453982987,0.900310307305074,1.42046841351126,0.787056926989615,0.617068451549513,0,0,0.233530684734339,0.329119699826961,0,0.0810688095458557,0,0.219550115291051,0,79.6998905058042,73.0622747892919,0,0,2.77274725695804,0.696710015581316,0.515469845288373,0.403367049246685,0,0,0,0.329397909448022,0.251335208800269,0,0.58489226135736,0,0,0,3.03468641524931,2.28497025219458,3.38123207019241,2.44381593414377,1.55161989734101,1.40271639780637,0.379419222745544,0,0,0,0,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,1.13694847062291,0.814824882210129,0.509235257325564,0.938760993154008,0.335012514883631,0,0,0.315270288212382,1.10732344824387,0.956728611944923,0.327726629431476,0.172684981865896,0.289298117163023,0,0,0,0.275936746304732,11.0779907091576,8.90808818100744,0,0,6.62567260774139,8.98009111882268,7.32439552291516,3.10659437338318,2.89638276307112,1.13230612315533,1.61924280669958,2.92255857911312,1.18586333383957,21.5285282002611,0,0.890328018336276,0.977321756121456,0,0,3.39892890616974,2.41858845571801,0.188605079755898,0.590603785761546,0.922305443831782,0.258428293168221,0.363533729477506,0.712994756769443,0,0,0,0,3.42116078659489,0.388076051348264,3.21505552547388,4.78818630834139,4.28085162244969,5.75921572107423,0.608929898229199,0,0,0,0.16488625294148,0,0.663442174209714,0,0.164140899745061,0,14.0923229527987,0.341741761595705,20.6386867963223,6.48180845793991,0.376736914009382,0.136694227721025,0.457556346413045,0,0,0,0,1.10717597753397,2.84647253977588,1.51207477150522,1.04544148007234,0.655087691238533,0.809186078308924,0.661227645802687,0,0,0,0,0.897099276263873,0.330916980914195,1.55560950675238,0.387479470433193,1.18269287843545,0.117357238645754,0.911430693907651,0.209718688851422,0,0,0,0.405450430580328,1.33524244314275,0.77952493786677,0.358053391334963,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0,0.187682475451182,0,1.92931541171159,0,142.882216182118,177.68554129177,179.316295706531,213.269799288516,168.530299863578,198.668595013491,184.281142563283,150.40728187689,169.475260960092,156.881374460801,1.14166082342594,8.77854721482268,9.90254913373978,14.5864030240976,5.8691685535835,8.82448840560068,6.22290837844523,9.06554251851134,8.66481865897901,12.8875577999537,12.4204856946217,13.2038438970253,7.95952813494,9.02754648908657,8.2132720606527,7.62069906052918,9.96605203125757,7.33055037762079,9.89006161927936,8.24313952752625,12.6861623382604,6.92155644021416,9.53744759789284,10.174249164263,11.387235030255,10.1537529470012,9.87811053512972,7.3659519202596,10.0495044245938,10.1005608898393,9.96534152243063,6.69830480153832,8.18462086339379,10.8455788830176,12.1531164918119,17.7365510335942,11.2287172053796,8.59484216193193,5.7386499620653,2.20591419119516,1.15933917810211
|short_description=p2@Nrxn1
|short_description=p2@Nrxn1
}}
}}

Latest revision as of 00:53, 27 September 2015

Short description:p2@Nrxn1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Nrxn1_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: -57bp_to_ENSMUST00000172466_5end
EntrezGene:Nrxn1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Nrxn1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A312.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C325.49
Mouse Granule cells, donor2.CNhs12357.11731-123E335.44
Mouse Granule cells, donor3.CNhs12108.11636-122C724.72
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D512.44
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.78
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.04
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F127.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D540.42
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D244.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F217.92
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D622.98
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D323.12
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F335.75
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D731.80
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D423.61
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F413.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D832.82
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.38
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.26
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I616.96
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D652.74
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F663.36
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E143.43
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C51.73
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B272.61
cerebellum, neonate N30.CNhs11135.1395-42I2110.17
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A427.71
corpus striatum, adult.CNhs10487.19-21D826.99
corpus striatum, neonate N00.CNhs11226.630-43F153.78
cortex, adult.CNhs10473.12-14D5134.37
cortex, neonate N30.CNhs11107.1392-42F2141.15
diencephalon, adult.CNhs10482.20-12F234.91
diencephalon, neonate N30.CNhs11201.1388-42B244.29
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C64.94
eyeball, embryo E14.CNhs10521.399-16E24.37
eyeball, embryo E15.CNhs10593.426-16C97.56
eyeball, embryo E17.CNhs11023.1261-18D43.62
eyeball, neonate N00.CNhs11207.633-15C64.69
eyeball, neonate N01.CNhs11140.1532-43E76.53
eyeball, neonate N02.CNhs11205.1551-44G84.87
eyeball, neonate N16.CNhs11188.777-19A23.36
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H23.78
forelimb, embryo E13.CNhs10589.384-1E25.10
forelimb, embryo E14.CNhs10577.413-26A87.01
forelimb, embryo E15.CNhs11007.437-20E74.73
forelimb, embryo E17.CNhs10598.1517-43C43.48
forelimb, embryo E18.CNhs11008.1520-43B52.68
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E879.70
hippocampus, neonate N00.CNhs11228.627-43G173.06
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I52.77
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I93.03
kidney, embryo E15.CNhs10997.434-16F82.28
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I22.44
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G71.40
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C211.08
medulla oblongata, neonate N30.CNhs11200.1396-42A38.91
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E28.98
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.32
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.11
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I921.53
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F43.40
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E63.42
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A53.22
pituitary gland, embryo E15.CNhs10592.427-16B94.79
pituitary gland, embryo E16.CNhs11036.449-43F64.28
pituitary gland, embryo E17.CNhs11039.1265-44F55.76
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.66
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C914.09
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C120.64
spleen, embryo E18.CNhs11011.1271-21F26.48
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G82.85
stomach, embryo E16.CNhs11022.459-17D41.51
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I21.34
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D51.93
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1142.88
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2177.69
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3179.32
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7213.27
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4168.53
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5198.67
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6184.28
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7150.41
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8169.48
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9156.88
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C98.78
whole body, embryo E13.CNhs10512.372-23H29.90
whole body, embryo E14.5.CNhs10578.420-27D214.59
whole body, embryo E14.CNhs10519.395-14B15.87
whole body, embryo E16.CNhs10514.453-14F28.82
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.07
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.66
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G512.89
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G512.42
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G513.20
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.96
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.03
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G512.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.92
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G510.17
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.39
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G510.15
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G59.88
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G510.05
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.10
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G59.97
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.70
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G58.18
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G510.85
whole body, embryo E17.5.CNhs10513.490-9F912.15
whole body, embryo E17.CNhs10517.475-3I517.74
whole body, embryo E18.CNhs10516.493-3B311.23
whole body, neonate N00.CNhs10525.657-19C28.59
whole body, neonate N01.CNhs10576.659-23C65.74
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron5.13e-1633
neuronal stem cell5.13e-1633
neuroblast5.13e-1633
electrically signaling cell5.13e-1633
CNS neuron (sensu Vertebrata)7.64e-1623
neuroblast (sensu Vertebrata)7.64e-1623
electrically responsive cell1.16e-1139
electrically active cell1.16e-1139
neural cell1.09e-1043
ectodermal cell3.55e-1044
neurectodermal cell3.55e-1044

Uber anatomy
Ontology termp-valuen
central nervous system1.96e-2973
nervous system6.07e-2875
neurectoderm6.12e-2864
neural plate6.12e-2864
presumptive neural plate6.12e-2864
regional part of nervous system8.29e-2754
neural tube3.55e-2552
neural rod3.55e-2552
future spinal cord3.55e-2552
neural keel3.55e-2552
ectoderm-derived structure2.92e-2395
ectoderm2.92e-2395
presumptive ectoderm2.92e-2395
gray matter2.12e-2234
ecto-epithelium1.42e-2173
brain2.96e-2147
future brain2.96e-2147
regional part of brain1.41e-2046
pre-chordal neural plate3.70e-2049
anterior neural tube7.94e-1940
brain grey matter1.82e-1829
regional part of telencephalon1.82e-1829
telencephalon1.82e-1829
regional part of forebrain4.11e-1839
forebrain4.11e-1839
future forebrain4.11e-1839
structure with developmental contribution from neural crest2.85e-1492
cerebral cortex1.77e-1321
cerebral hemisphere1.77e-1321
pallium1.77e-1321
regional part of cerebral cortex2.38e-1117
occipital lobe2.91e-1010
visual cortex2.91e-1010
neocortex2.91e-1010
posterior neural tube6.50e-0712
chordal neural plate6.50e-0712
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