FFCP PHASE1:Mm9::chr18:57632117..57632134,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=438 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:57632117..57632134,+ | |||
|description=CAGE_peak_at_chr18:57632117..57632134,+ | |description=CAGE_peak_at_chr18:57632117..57632134,+ | ||
|id=chr18:57632117..57632134,+ | |id=chr18:57632117..57632134,+ | ||
|ontology_enrichment_celltype=CL:0002610!7.45e-07!3 | |ontology_enrichment_celltype=CL:0002610!7.45e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.19e-23,3;CL:0002614,1.02e-10,3;CL:0000117,3.28e-08,23;CL:0000337,3.28e-08,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!4.39e-14!63;UBERON:0000955!2.74e-11!50;UBERON:0006238!2.74e-11!50;UBERON:0002616!2.57e-10!49;UBERON:0002346!6.05e-10!71;UBERON:0003075!6.05e-10!71;UBERON:0007284!6.05e-10!71;UBERON:0004121!8.27e-09!102;UBERON:0000924!8.27e-09!102;UBERON:0006601!8.27e-09!102;UBERON:0003056!1.58e-08!49;UBERON:0007811!2.50e-08!86;UBERON:0002298!3.06e-07!6;UBERON:0000153!5.04e-07!94;UBERON:0001049!5.50e-07!52;UBERON:0005068!5.50e-07!52;UBERON:0006241!5.50e-07!52;UBERON:0007135!5.50e-07!52;UBERON:0004684!7.45e-07!3;UBERON:0002275!7.45e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,1.19e-23,3;UBERON:0002275,1.19e-23,3;UBERON:0002038,1.02e-10,3;UBERON:0009663,1.02e-10,3;UBERON:0009661,1.02e-10,3;UBERON:0000125,1.02e-10,3;UBERON:0002308,1.02e-10,3;UBERON:0000073,2.42e-10,54;UBERON:0001374,2.89e-08,1;UBERON:0004252,2.89e-08,1;UBERON:0003663,2.89e-08,1;UBERON:0005090,2.89e-08,1;UBERON:0001630,2.89e-08,1;UBERON:0003661,2.89e-08,1;UBERON:0010890,2.89e-08,1;UBERON:0001383,2.89e-08,1;UBERON:0002950,2.91e-08,4;UBERON:0001891,2.91e-08,4;UBERON:0009616,2.91e-08,4;UBERON:0010286,2.91e-08,4;UBERON:0001017,1.97e-07,73;UBERON:0001016,3.27e-07,75;UBERON:0001894,4.27e-07,10;UBERON:0006222,4.27e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,5.50579404996943,3.31987079021488,4.45458946443106,0,0.0914876436024097,0,0,1.12552522006336,1.83357897332172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33597925158342,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0.161766849947409,0.220841518460394,0,0,0,0.209446706813455,0,0,0,0,0.299581278809645,0,0.125654352112864,0.347648640384553,0.255715457330331,1.45451631191692,1.1356888414743,0,0,0,0.420883711772948,0,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268412837520744,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0.397912944082302,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0.289298117163023,0,0,0,0,0.160550589987792,0.35163505977661,0.163934945376675,1.00988370881749,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0.258717367565509,0,0,0.535106452806212,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0,0,0,0,0.0826534557253359,0.523511883968059,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0.375364950902364,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0.453142408984205,1.03552062350364,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,5.50579404996943,3.31987079021488,4.45458946443106,0,0.0914876436024097,0,0,1.12552522006336,1.83357897332172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33597925158342,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0.161766849947409,0.220841518460394,0,0,0,0.209446706813455,0,0,0,0,0.299581278809645,0,0.125654352112864,0.347648640384553,0.255715457330331,1.45451631191692,1.1356888414743,0,0,0,0.420883711772948,0,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268412837520744,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0.397912944082302,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0.289298117163023,0,0,0,0,0.160550589987792,0.35163505977661,0.163934945376675,1.00988370881749,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0.258717367565509,0,0,0.535106452806212,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0,0,0,0,0.0826534557253359,0.523511883968059,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0.375364950902364,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0.453142408984205,1.03552062350364,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0.191288332068843,0,0 | ||
|short_description=p@chr18:57632117..57632134,+ | |short_description=p@chr18:57632117..57632134,+ | ||
}} | }} |
Latest revision as of 22:04, 5 August 2015
Short description: | p@chr18:57632117..57632134, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:57632117..57632134, + |
Coexpression cluster: | MCL_coexpression_mm9:438 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.19e-23 | 3 |
neuron of the substantia nigra | 1.02e-10 | 3 |
CNS neuron (sensu Vertebrata) | 3.28e-08 | 23 |
neuroblast (sensu Vertebrata) | 3.28e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 1.19e-23 | 3 |
reticular formation | 1.19e-23 | 3 |
substantia nigra | 1.02e-10 | 3 |
telencephalic nucleus | 1.02e-10 | 3 |
midbrain nucleus | 1.02e-10 | 3 |
neural nucleus | 1.02e-10 | 3 |
nucleus of brain | 1.02e-10 | 3 |
regional part of nervous system | 2.42e-10 | 54 |
biceps femoris | 2.89e-08 | 1 |
hindlimb stylopod muscle | 2.89e-08 | 1 |
hindlimb muscle | 2.89e-08 | 1 |
muscle structure | 2.89e-08 | 1 |
muscle organ | 2.89e-08 | 1 |
limb muscle | 2.89e-08 | 1 |
pelvic complex muscle | 2.89e-08 | 1 |
muscle of leg | 2.89e-08 | 1 |
regional part of midbrain | 2.91e-08 | 4 |
midbrain | 2.91e-08 | 4 |
presumptive midbrain | 2.91e-08 | 4 |
midbrain neural tube | 2.91e-08 | 4 |
central nervous system | 1.97e-07 | 73 |
nervous system | 3.27e-07 | 75 |
diencephalon | 4.27e-07 | 10 |
future diencephalon | 4.27e-07 | 10 |