FFCP PHASE1:Hg19::chr12:58138778..58138789,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6302 | |EntrezGene=6302 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10539 | |HGNC=10539 | ||
|TSSclassifier=strong | |||
|UniProt=Q12999,Q53X76 | |UniProt=Q12999,Q53X76 | ||
|association_with_transcript=0bp_to_NM_005981,uc001spt.2,uc009zqb.2_5end | |association_with_transcript=0bp_to_NM_005981,uc001spt.2,uc009zqb.2_5end | ||
|cluster_id=chr12:58138778..58138789,+ | |||
|coexpression_cluster_id=C181 | |||
|description=CAGE_peak_2_at_TSPAN31_5end | |description=CAGE_peak_2_at_TSPAN31_5end | ||
|id=chr12:58138778..58138789,+ | |id=chr12:58138778..58138789,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.24e-08!180;CL:0000192!3.04e-07!42;CL:0000514!3.04e-07!42;CL:0000680!7.48e-07!57;CL:0000056!7.48e-07!57;CL:0000355!7.48e-07!57 | |ontology_enrichment_celltype=CL:0000055!4.24e-08!180;CL:0000192!3.04e-07!42;CL:0000514!3.04e-07!42;CL:0000680!7.48e-07!57;CL:0000056!7.48e-07!57;CL:0000355!7.48e-07!57 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,3.62e-07,43;CL:0000514,3.62e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!1.32e-09!216;UBERON:0000475!3.22e-09!365;UBERON:0000468!2.62e-08!659;UBERON:0000486!1.37e-07!82;UBERON:0005256!1.55e-07!143;UBERON:0000914!2.73e-07!83;UBERON:0002329!2.73e-07!83;UBERON:0003077!2.73e-07!83;UBERON:0003059!2.73e-07!83;UBERON:0007282!2.73e-07!83;UBERON:0009618!2.73e-07!83;UBERON:0007285!2.73e-07!83 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,5.80e-07,83 | |||
|phase1_expression=1.09007027562334,0.856402095563933,1.12763523276777,1.0007329835313,0.446961094427288,3.48935409640147,0,1.26343974685366,1.82829939739887,0.491467873003018,0.697801167972428,1.09220686065086,1.84636884759917,1.60896258848061,0.331397375727916,0,1.20538905604795,0.730310090387373,1.46379839637152,0.369363174230364,1.02000345622126,0.940364164434263,0.286235987131057,0,0.125542639594803,0.0764134057479513,0.164201178899891,0.236132343941038,0,0,0,0,0.6024118375565,0.739508020333575,0.46480320348181,0.284338464974843,0.293600439334847,0,0,0,0.447830948479849,0.647787332037959,0.515151135268373,0,0,0,0.232429036905685,0,0,0,0,0.236482229888585,0.689491361473237,0.645484683583826,1.35426486594342,0.188242339542605,0,0,0,0.320929027076094,0.639337125799041,0.329851300186716,0,0,0.870627715885752,0,0,0,0,0,0,0,0.316462387440884,0.211255286311942,0.212604299965044,0,0.112328631146495,0.450530678524519,0.48217676009124,0.285012743741249,0,0.182664153764634,0,0,0,0,0.800791974072025,0,0,0.954053754535364,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0.473447805734733,0,0,0.294605907474837,0,0,0.128091319725675,0.130059347559878,0.493313713811028,0,0.289803085735052,0,0.267540828089713,0,0.113309342697566,0,0,0.506039384039006,0,0,0,0.150575119077773,0,0,0.473554504088034,0,0,0,0,0,0,0.767175371061182,0.722878304769133,1.50401373190767,1.44846518960824,1.5905718941022,0.973269740605272,1.03988298880475,1.10864698731282,1.05401742831751,0.458426764241994,1.09288586487763,1.11235332835329,0.649094787309367,0,1.06366368415092,0.238490624305342,0,0.371457501329565,0.39752481473341,0.860234595106124,0.347140501607594,1.13061588384802,0,0.275118041940067,0.208994966536811,0,0.71153252537342,0.33472061276467,0.402829317109147,0,0,0.367663080345869,0.81014194788176,0.357198913136319,0,0,1.53316637465883,0,0.549605231791222,0,0,1.3082821564276,0,0.633152558322899,0.926864265692532,1.14734648299525,0.709336764396714,0,0,1.48000529050296,0.311211035399766,0.67355336034844,0.980771418680752,0.756787138224657,0,0.937285727335186,0,0.570471821544449,1.64393548606981,0.704606991862589,0.323745888736263,0.280901613404497,0.408308342509787,0.859840221182376,0.516628905878827,3.56400857184616,0.741800787835671,0.910161361938026,1.43723628363248,1.17835279767846,0.125118519871964,0.831192346452549,0.877955241761676,1.5324389789951,0.45071417671979,0.226864366320042,0.358779271377724,0.640672166455702,0,0.300091096084402,0.515262646192195,0.515281080091258,1.11670113798954,1.0126579934476,1.07180705677318,1.00973509697646,0.368199594569197,0.969876340912871,1.42003837006646,0.403008392910561,0.847802961552438,0.57978255948989,1.63647672354501,1.43402297694502,0.243947412259191,0.265059536642971,0.464775771478074,0.10366105501537,0,0,0,0,1.38134921352481,0.928735856063958,0,0.473227200159376,0.168584690078102,0.241011029883482,0.55146986366197,1.08939722046203,0.71181185733329,0.269662616320329,0.196221465125346,0.38474715694639,0,0,0.8231480226628,1.47008711385542,1.26755034821831,0.982827216677626,1.18157981336281,0,0.245976877086227,0.857839051492628,0.548751427043128,1.1240175325762,1.10581869652794,0.555530670951178,0.651616610620649,0,0,1.39116485970092,0.587043471179108,0.433099343283221,0,0.380508304469197,3.1608175918371,2.57545848628462,1.96973604869918,1.40402559083543,0.743155811443641,0.93733833986777,0.839910640994298,1.41775097242386,0.806026704325635,0.581267877027924,0.383382679165211,0,0.176096868026452,1.03664057770386,0.288239906833923,0.6312121671319,0.952468414382536,1.90994212779139,0,1.71072446022705,1.23392991243988,0.600686115687835,0.285826432630578,0.224262168690721,0.87192013766656,0.1466765716419,0.517086863031111,0,0,0.26593811658487,0,0.514414748524284,1.41849132023278,0.266422179016099,1.14382394926518,1.62786481617433,1.64648067356154,0.65147236858747,0.355391948742546,2.37585561880029,1.20575750823834,1.74306691720059,0.699810938274399,1.2162378064119,0.502257091432126,0,0.239624855491583,0,0,1.30303176000821,0.61642896765115,0.895304816199478,0.112085143993527,0,0,0,0,0,0,0.167516265334349,0,0,0,0,1.10422342547226,0.500170521059677,0.542530047399471,0.623912584592421,0.535286966391485,0.788512075169673,0.937131319941706,0.902838299183157,2.27407504055985,0,0.664225598535437,0.368738337083406,0.955719759148911,0.783204629850962,1.02943027143257,0,0.215714200818617,0,0.909382714338778,3.32870879020994,1.20956117331872,0.744323423456331,1.53461973288062,1.40330047216537,0.768834895534206,1.53512174720011,0.965123526861645,2.96836132889982,0.154209693802656,1.06537035187876,0.410635780069046,0,0.116210378459959,0.362578348774867,0.40101294060657,2.4861867012692,0.803701137152247,0.546273504020151,1.04899531967539,0,0.924184045252977,0.784349769176855,1.46139224653261,0.73886140225013,0,0,0.215915916102139,1.54227252690289,1.08378575017541,1.00337954770971,0.764628819135115,0.831076008928724,0.447749509444357,0.219259876645935,0,0.769350375349168,0,0.325378394664303,1.030410116477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| ||
|short_description=p2@TSPAN31 | |short_description=p2@TSPAN31 | ||
}} | }} |
Latest revision as of 16:18, 19 September 2015
Short description: | p2@TSPAN31 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TSPAN31_5end |
Coexpression cluster: | C181_liposarcoma_somatostatinoma_neuroblastoma_mesothelioma_nonsmall_small_Alveolar |
Association with transcript: | 0bp_to_NM_005981, uc001spt.2, uc009zqb.2_5end |
EntrezGene: | TSPAN31 |
HGNC: | 10539 |
UniProt: | Q12999Q53X76 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 3.62e-07 | 43 |
smooth muscle myoblast | 3.62e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
multilaminar epithelium | 5.80e-07 | 83 |