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{{CL
{{CL
|id=CL:0000215
|alt_id=
|name=barrier cell
|namespace=cell
|def="A cell whose primary function is to prevent the transport of stuff across compartments." [JB:jb]
|xref=
|is_a=CL:0000144
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="A cell whose primary function is to prevent the transport of stuff across compartments." [JB:jb]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0000215
|is_a=CL:0000003
|is_obsolete=
|located_in=
|located_in=
|name=barrier cell
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|subset=
|synonym=
|union_of=
|xref=
}}
}}

Latest revision as of 16:31, 12 September 2014

Name:barrier cell
Namespace:FANTOM
Definition:"A cell whose primary function is to prevent the transport of stuff across compartments." [JB:jb]


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000003(native cell)



Children


is a:CL:0000213 (lining cell),CL:0000217 (insulating cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000215 (barrier cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
9.38e-90FFCP PHASE1:Hg19::chr6:3753188..3753192,-#_65783fb676651236bae39d787fcbde36p@chr6:3753188..3753192, -
9.38e-90FFCP PHASE2:Hg19::chr6:3753188..3753192,-#_65783fb676651236bae39d787fcbde36p@chr6:3753188..3753192, -
1.08e-85FFCP PHASE1:Hg19::chr2:56216687..56216727,-#_e41d6999c57a5869e2b0992b84c845fep1@MIR216A
1.08e-85FFCP PHASE2:Hg19::chr2:56216687..56216727,-#_e41d6999c57a5869e2b0992b84c845fep1@MIR216A
1.18e-82FFCP PHASE1:Hg19::chr11:124761247..124761258,-#_9f96bb2b83d0fcf7675dc3e3cdf22278p@chr11:124761247..124761258, -
1.18e-82FFCP PHASE2:Hg19::chr11:124761247..124761258,-#_9f96bb2b83d0fcf7675dc3e3cdf22278p@chr11:124761247..124761258, -
3.15e-82FFCP PHASE2:Hg19::chr17:62084108..62084111,-#_0f322c395566c0cda612d1cc88a8d37ap5@ICAM2
3.15e-82FFCP PHASE1:Hg19::chr17:62084108..62084111,-#_0f322c395566c0cda612d1cc88a8d37ap5@ICAM2
7.67e-74FFCP PHASE1:Hg19::chr16:2220383..2220402,+#_c58eb987d1ea97432e0b19c278f9b1f1p@chr16:2220383..2220402, +
7.67e-74FFCP PHASE2:Hg19::chr16:2220383..2220402,+#_c58eb987d1ea97432e0b19c278f9b1f1p@chr16:2220383..2220402, +
2.09e-71FFCP PHASE2:Hg19::chrX:71299684..71299699,+#_af81b845ae735cddbdf526041d803f5ap@chrX:71299684..71299699, +
2.09e-71FFCP PHASE1:Hg19::chrX:71299684..71299699,+#_af81b845ae735cddbdf526041d803f5ap@chrX:71299684..71299699, +
2.28e-71FFCP PHASE1:Hg19::chr5:95920642..95920681,+#_5a9981962d23e2c36adebad578a35ad2p1@ENST00000513158
2.28e-71FFCP PHASE2:Hg19::chr5:95920642..95920681,+#_5a9981962d23e2c36adebad578a35ad2p1@ENST00000513158
8.35e-71FFCP PHASE1:Hg19::chr12:80084018..80084035,-#_5115b4d8351d4b9a6a3b9b8505059cbep17@PAWR
8.35e-71FFCP PHASE2:Hg19::chr12:80084018..80084035,-#_5115b4d8351d4b9a6a3b9b8505059cbep17@PAWR
1.45e-70FFCP PHASE2:Hg19::chr13:32835894..32835907,+#_8a0dad40098d6b907cf8a92e5fe15121p@chr13:32835894..32835907, +
1.45e-70FFCP PHASE1:Hg19::chr13:32835894..32835907,+#_8a0dad40098d6b907cf8a92e5fe15121p@chr13:32835894..32835907, +
2.27e-70FFCP PHASE2:Hg19::chr19:4639579..4639589,+#_5808d1077916b6bc64f81ff9795c2d89p2@TNFAIP8L1
2.27e-70FFCP PHASE1:Hg19::chr19:4639579..4639589,+#_5808d1077916b6bc64f81ff9795c2d89p2@TNFAIP8L1
3.43e-69FFCP PHASE2:Hg19::chr18:33046982..33046991,-#_e3ad75cd0d91b201d9c3434fc1df3544p@chr18:33046982..33046991, -
3.43e-69FFCP PHASE1:Hg19::chr18:33046982..33046991,-#_e3ad75cd0d91b201d9c3434fc1df3544p@chr18:33046982..33046991, -
2.3e-68FFCP PHASE2:Hg19::chr18:33047117..33047138,-#_7f9641ef69527b23f443eb2e6c6ef832p@chr18:33047117..33047138, -
2.3e-68FFCP PHASE1:Hg19::chr18:33047117..33047138,-#_7f9641ef69527b23f443eb2e6c6ef832p@chr18:33047117..33047138, -
3.25e-68FFCP PHASE2:Hg19::chr15:39423060..39423066,+#_75cc5a2e3abdcd45a40cf9be5cfebdcdp@chr15:39423060..39423066, +
3.25e-68FFCP PHASE1:Hg19::chr15:39423060..39423066,+#_75cc5a2e3abdcd45a40cf9be5cfebdcdp@chr15:39423060..39423066, +
6.57e-68FFCP PHASE2:Hg19::chrX:15518894..15518905,+#_f3b95aece29db7de8db6d6c1727ed55bp2@BMX
6.57e-68FFCP PHASE1:Hg19::chrX:15518894..15518905,+#_f3b95aece29db7de8db6d6c1727ed55bp2@BMX
9.72e-67FFCP PHASE2:Hg19::chr14:38725249..38725254,-#_e0b65d87ce55899cef65e6d48b9e60e4p6@CLEC14A
9.72e-67FFCP PHASE1:Hg19::chr14:38725249..38725254,-#_e0b65d87ce55899cef65e6d48b9e60e4p6@CLEC14A
1.07e-66FFCP PHASE2:Hg19::chr12:105863654..105863682,+#_f8300d175efa25b9ea5e02cd40827965p@chr12:105863654..105863682, +
1.07e-66FFCP PHASE1:Hg19::chr12:105863654..105863682,+#_f8300d175efa25b9ea5e02cd40827965p@chr12:105863654..105863682, +
2.37e-66FFCP PHASE2:Hg19::chr3:58034268..58034295,+#_6774721cdce37d3dae434418f8b4a282p@chr3:58034268..58034295, +
2.37e-66FFCP PHASE1:Hg19::chr3:58034268..58034295,+#_6774721cdce37d3dae434418f8b4a282p@chr3:58034268..58034295, +
2.95e-66FFCP PHASE1:Hg19::chr18:33047157..33047168,-#_8e9df00baad7bb0b37906c5af899904ap@chr18:33047157..33047168, -
2.95e-66FFCP PHASE2:Hg19::chr18:33047157..33047168,-#_8e9df00baad7bb0b37906c5af899904ap@chr18:33047157..33047168, -
3.95e-66FFCP PHASE2:Hg19::chr3:43538305..43538325,-#_d7097b03cd86060e3d8e69c4ccd23174p@chr3:43538305..43538325, -
3.95e-66FFCP PHASE1:Hg19::chr3:43538305..43538325,-#_d7097b03cd86060e3d8e69c4ccd23174p@chr3:43538305..43538325, -
4.08e-66FFCP PHASE1:Hg19::chr10:129785574..129785580,+#_37e6579128236950bb350b5c844c6bd9p14@PTPRE
4.08e-66FFCP PHASE2:Hg19::chr10:129785574..129785580,+#_37e6579128236950bb350b5c844c6bd9p14@PTPRE
4.12e-66FFCP PHASE2:Hg19::chr14:38725228..38725236,-#_8dcad87b2e041553d4e212ab88e0fd15p5@CLEC14A
4.12e-66FFCP PHASE1:Hg19::chr14:38725228..38725236,-#_8dcad87b2e041553d4e212ab88e0fd15p5@CLEC14A
7.46e-66FFCP PHASE1:Hg19::chr12:105863636..105863650,+#_58d495ad63aaaea88d94d20592edcde5p@chr12:105863636..105863650, +
7.46e-66FFCP PHASE2:Hg19::chr12:105863636..105863650,+#_58d495ad63aaaea88d94d20592edcde5p@chr12:105863636..105863650, +
1.52e-65FFCP PHASE2:Hg19::chr9:139543390..139543404,+#_c3afbfcf5a8b9ab20d27abf61166ccc4p@chr9:139543390..139543404, +
1.52e-65FFCP PHASE1:Hg19::chr9:139543390..139543404,+#_c3afbfcf5a8b9ab20d27abf61166ccc4p@chr9:139543390..139543404, +
3.21e-62FFCP PHASE2:Hg19::chr13:32835912..32835936,+#_9c48f36868081f114d6ef2c9140d74a9p@chr13:32835912..32835936, +
3.21e-62FFCP PHASE1:Hg19::chr13:32835912..32835936,+#_9c48f36868081f114d6ef2c9140d74a9p@chr13:32835912..32835936, +
1.13e-60FFCP PHASE2:Hg19::chr13:32838801..32838818,+#_8a0a7fba92964bf64a01ad801ac6a22fp9@FRY
1.13e-60FFCP PHASE1:Hg19::chr13:32838801..32838818,+#_8a0a7fba92964bf64a01ad801ac6a22fp9@FRY
3.1e-60FFCP PHASE2:Hg19::chr16:66413317..66413328,+#_028eff1ec6f7835d9c4df3d8f651283dp1@AB385138
3.1e-60FFCP PHASE1:Hg19::chr16:66413317..66413328,+#_028eff1ec6f7835d9c4df3d8f651283dp1@AB385138
3.19e-60FFCP PHASE2:Hg19::chr17:47287786..47287797,+#_2cb61786d12f8bd9fed8fcc60e3cde7cp4@ABI3
3.19e-60FFCP PHASE1:Hg19::chr17:47287786..47287797,+#_2cb61786d12f8bd9fed8fcc60e3cde7cp4@ABI3
3.76e-60FFCP PHASE2:Hg19::chr19:41985048..41985050,-#_88c43b47f32bbbf524372c8a8e6842d5p@chr19:41985048..41985050, -
3.76e-60FFCP PHASE1:Hg19::chr19:41985048..41985050,-#_88c43b47f32bbbf524372c8a8e6842d5p@chr19:41985048..41985050, -
4.08e-60FFCP PHASE2:Hg19::chr12:118112251..118112272,-#_e1d66c7f97a429829257478a6ca61866p12@KSR2
4.08e-60FFCP PHASE1:Hg19::chr12:118112251..118112272,-#_e1d66c7f97a429829257478a6ca61866p12@KSR2
6.68e-60FFCP PHASE2:Hg19::chr7:150329732..150329739,-#_3eff53f3c4454a9961f073e4ca876593p8@GIMAP6
6.68e-60FFCP PHASE1:Hg19::chr7:150329732..150329739,-#_3eff53f3c4454a9961f073e4ca876593p8@GIMAP6
1.42e-59FFCP PHASE1:Hg19::chr5:176433333..176433349,-#_4743dd0e545cb92598a3f60036e6203fp11@UIMC1
1.42e-59FFCP PHASE2:Hg19::chr5:176433333..176433349,-#_4743dd0e545cb92598a3f60036e6203fp11@UIMC1
2.09e-59FFCP PHASE1:Hg19::chr10:50153735..50153750,+#_f33ed3b3ce34eeec16a35c28cc48d22ep6@WDFY4
2.09e-59FFCP PHASE2:Hg19::chr10:50153735..50153750,+#_f33ed3b3ce34eeec16a35c28cc48d22ep6@WDFY4
2.31e-59FFCP PHASE2:Hg19::chr12:105863705..105863718,+#_63b708f33c56e110a5c3c8676661236cp@chr12:105863705..105863718, +
2.31e-59FFCP PHASE1:Hg19::chr12:105863705..105863718,+#_63b708f33c56e110a5c3c8676661236cp@chr12:105863705..105863718, +
2.82e-58FFCP PHASE1:Hg19::chr10:99655692..99655725,-#_a9aa4c90318b66c94cf27996dc8f3eb3p@chr10:99655692..99655725, -
2.82e-58FFCP PHASE2:Hg19::chr10:99655692..99655725,-#_a9aa4c90318b66c94cf27996dc8f3eb3p@chr10:99655692..99655725, -
3.16e-58FFCP PHASE2:Hg19::chrX:128781853..128781866,-#_058f58ea1b110078d8797cdd54eb7f9fp@chrX:128781853..128781866, -
3.16e-58FFCP PHASE1:Hg19::chrX:128781853..128781866,-#_058f58ea1b110078d8797cdd54eb7f9fp@chrX:128781853..128781866, -
3.28e-58FFCP PHASE1:Mm9::chr1:185424641..185424650,+#_12d6f061554a4bd2f3dfc471ec9d6955p@chr1:185424641..185424650, +
3.28e-58FFCP PHASE1:Mm9::chr7:138004756..138004766,+#_12d6f061554a4bd2f3dfc471ec9d6955p@chr7:138004756..138004766, +
3.28e-58FFCP PHASE1:Mm9::chr18:57302324..57302348,+#_12d6f061554a4bd2f3dfc471ec9d6955p6@Megf10
3.28e-58FFCP PHASE2:Mm9::chr18:57302392..57302409,+#_12d6f061554a4bd2f3dfc471ec9d6955p11@Megf10
3.28e-58FFCP PHASE1:Mm9::chr6:137465516..137465540,-#_12d6f061554a4bd2f3dfc471ec9d6955p@chr6:137465516..137465540, -
3.28e-58FFCP PHASE1:Mm9::chr7:138011022..138011028,+#_12d6f061554a4bd2f3dfc471ec9d6955p@chr7:138011022..138011028, +
3.28e-58FFCP PHASE2:Mm9::chr5:152054997..152055007,+#_12d6f061554a4bd2f3dfc471ec9d6955p@chr5:152054997..152055007, +
3.28e-58FFCP PHASE1:Mm9::chr6:17413432..17413442,+#_12d6f061554a4bd2f3dfc471ec9d6955p10@Met
3.28e-58FFCP PHASE2:Mm9::chr7:138011031..138011037,+#_12d6f061554a4bd2f3dfc471ec9d6955p@chr7:138011031..138011037, +
3.28e-58FFCP PHASE1:Mm9::chr17:27698308..27698322,+#_12d6f061554a4bd2f3dfc471ec9d6955p@chr17:27698308..27698322, +
3.28e-58FFCP PHASE2:Mm9::chr18:57302272..57302282,+#_12d6f061554a4bd2f3dfc471ec9d6955p16@Megf10
3.28e-58FFCP PHASE1:Mm9::chr15:87485366..87485375,+#_12d6f061554a4bd2f3dfc471ec9d6955p@chr15:87485366..87485375, +
3.28e-58FFCP PHASE1:Mm9::chr2:13346379..13346390,-#_12d6f061554a4bd2f3dfc471ec9d6955p@chr2:13346379..13346390, -
3.28e-58FFCP PHASE2:Mm9::chr6:137465516..137465540,-#_12d6f061554a4bd2f3dfc471ec9d6955p@chr6:137465516..137465540, -
3.28e-58FFCP PHASE1:Mm9::chr11:99720036..99720055,-#_12d6f061554a4bd2f3dfc471ec9d6955p@chr11:99720036..99720055, -
3.28e-58FFCP PHASE2:Mm9::chr6:31038349..31038357,-#_12d6f061554a4bd2f3dfc471ec9d6955p2@ENSMUST00000123757
3.28e-58FFCP PHASE2:Mm9::chr15:87485366..87485375,+#_12d6f061554a4bd2f3dfc471ec9d6955p@chr15:87485366..87485375, +
3.28e-58FFCP PHASE1:Mm9::chr6:17441128..17441144,+#_12d6f061554a4bd2f3dfc471ec9d6955p@chr6:17441128..17441144, +
3.28e-58FFCP PHASE1:Mm9::chr18:24270578..24270588,-#_12d6f061554a4bd2f3dfc471ec9d6955p@chr18:24270578..24270588, -
3.28e-58FFCP PHASE1:Mm9::chr18:57302359..57302364,+#_12d6f061554a4bd2f3dfc471ec9d6955p18@Megf10
3.28e-58FFCP PHASE2:Mm9::chr18:57302410..57302419,+#_12d6f061554a4bd2f3dfc471ec9d6955p17@Megf10
3.28e-58FFCP PHASE1:Mm9::chr6:137468262..137468263,-#_12d6f061554a4bd2f3dfc471ec9d6955p13@Eps8
3.28e-58FFCP PHASE1:Mm9::chr7:114866423..114866442,+#_12d6f061554a4bd2f3dfc471ec9d6955p@chr7:114866423..114866442, +
3.28e-58FFCP PHASE1:Mm9::chr7:138011031..138011037,+#_12d6f061554a4bd2f3dfc471ec9d6955p@chr7:138011031..138011037, +
3.28e-58FFCP PHASE2:Mm9::chr12:45626625..45626647,+#_12d6f061554a4bd2f3dfc471ec9d6955p@chr12:45626625..45626647, +
3.28e-58FFCP PHASE1:Mm9::chr5:152054997..152055007,+#_12d6f061554a4bd2f3dfc471ec9d6955p@chr5:152054997..152055007, +
3.28e-58FFCP PHASE1:Mm9::chr13:20332675..20332683,+#_12d6f061554a4bd2f3dfc471ec9d6955p@chr13:20332675..20332683, +
3.28e-58FFCP PHASE1:Mm9::chr11:95431700..95431710,-#_12d6f061554a4bd2f3dfc471ec9d6955p@chr11:95431700..95431710, -
3.28e-58FFCP PHASE2:Mm9::chr5:152055079..152055086,+#_12d6f061554a4bd2f3dfc471ec9d6955p@chr5:152055079..152055086, +
3.28e-58FFCP PHASE2:Mm9::chrX:70920870..70920877,+#_12d6f061554a4bd2f3dfc471ec9d6955p21@Slc6a8

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