FFCP PHASE1:Hg19::chr12:6453568..6453570,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:6453568..6453570,- | |||
|description=CAGE_peak_at_chr12:6453568..6453570,- | |description=CAGE_peak_at_chr12:6453568..6453570,- | ||
|id=chr12:6453568..6453570,- | |id=chr12:6453568..6453570,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000123;2.02e-11;2!CL:0000242;2.02e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.02e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0005754;5.16e-21;1!UBERON:0007297;3.34e-11;2 | |||
|ontology_enrichment_disease=DOID:305!4.61e-15!106;DOID:0050687!1.43e-12!143;DOID:299!1.58e-07!25;DOID:1749!2.38e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:4074;3.34e-11;2!DOID:4905;3.34e-11;2!DOID:3498;3.34e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,2.73e-11,2;DOID:4905,2.73e-11,2;DOID:3498,2.73e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0001007!9.02e-08!155;UBERON:0001555!9.02e-08!155;UBERON:0007026!9.02e-08!155;UBERON:0005911!1.43e-07!82;UBERON:0004119!6.41e-07!169;UBERON:0000925!6.41e-07!169;UBERON:0006595!6.41e-07!169;UBERON:0002048!8.36e-07!22;UBERON:0000117!8.36e-07!22;UBERON:0000171!8.36e-07!22;UBERON:0000170!8.36e-07!22;UBERON:0005597!8.36e-07!22;UBERON:0000118!8.36e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000998;5.16e-21;1!UBERON:0002171;5.16e-21;1!UBERON:0006868;5.16e-21;1!UBERON:0006518;5.16e-21;1!UBERON:0008949;5.16e-21;1!UBERON:0000101;5.16e-21;1!UBERON:0002167;5.16e-21;1!UBERON:0000473;7.67e-11;8!UBERON:0003135;3.89e-08;11!UBERON:0006947;6.78e-08;3!UBERON:0004054;6.78e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,4.22e-21,1;UBERON:0006868,4.22e-21,1;UBERON:0002171,5.16e-21,1;UBERON:0006518,5.16e-21,1;UBERON:0008949,5.16e-21,1;UBERON:0000101,5.16e-21,1;UBERON:0002167,5.16e-21,1;UBERON:0000473,8.06e-11,8;UBERON:0003135,4.04e-08,11;UBERON:0006947,6.34e-08,3;UBERON:0004054,6.34e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0.398927315243264,0.426224750532694,0,0,0,0.502497330513487,1.0429658368404,0,1.21079900526674,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81974010175699,0,0,0,0,0,0,0,0,0,0,0,0,2.53350489753592,0.19924798825107,0.276283915531148,0,0,0,0,0,0.537063524026827,0,0,0,0,0,0,0,0,0,0,0.455173793141999,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0,0.163232808159148,0,0.216388639742091,0,0,0.611030144933625,0,0,0,0,0,0,0,1.36965233252463,0.242780379534093,0.789168805698781,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0.520679215005393,0,0.261177619741208,0,0,0,0,0,0,0,0,0,0,0,0.586654148204409,0,0.426905989478705,0,0.144090417154106,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0.275078873194468,0,0,0,0,0,0.551639951094387,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0.171086837884329,1.40963004463334,0.106787412567695,0,1.24271716604159,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,2.81000943484129,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0.371807292777007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.235939446695481,0,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0.813689977576877,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0.223710863595585,0.98150233615243,0.487671699929078,0,0,0,0,0.467878926924211,0.198950775161368,0.118920090777569,0.33883824611688,0,0,0.154348316215889,0,0.470317296361523,0,0.235676547101626,0,0,0,0,0,0,0,0.178553938605658,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06886962106224,0,0.50141507858475,0.151557396436479,0,0,0.103432995861895,0.213233981900981,0,0,0.0620747142958579,0.112131862580613,0.0636471582781649,0.404234377916439,0,0,0.134704106029175,0,0,0.0814032686109745,0,0,0.359300808426348,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0.398927315243264,0.426224750532694,0,0,0,0.502497330513487,1.0429658368404,0,1.21079900526674,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81974010175699,0,0,0,0,0,0,0,0,0,0,0,0,2.53350489753592,0.19924798825107,0.276283915531148,0,0,0,0,0,0.537063524026827,0,0,0,0,0,0,0,0,0,0,0.455173793141999,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0,0.163232808159148,0,0.216388639742091,0,0,0.611030144933625,0,0,0,0,0,0,0,1.36965233252463,0.242780379534093,0.789168805698781,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0.520679215005393,0,0.261177619741208,0,0,0,0,0,0,0,0,0,0,0,0.586654148204409,0,0.426905989478705,0,0.144090417154106,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0.275078873194468,0,0,0,0,0,0.551639951094387,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0.171086837884329,1.40963004463334,0.106787412567695,0,1.24271716604159,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,2.81000943484129,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0.371807292777007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.235939446695481,0,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0.813689977576877,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0.223710863595585,0.98150233615243,0.487671699929078,0,0,0,0,0.467878926924211,0.198950775161368,0.118920090777569,0.33883824611688,0,0,0.154348316215889,0,0.470317296361523,0,0.235676547101626,0,0,0,0,0,0,0,0.178553938605658,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06886962106224,0,0.50141507858475,0.151557396436479,0,0,0.103432995861895,0.213233981900981,0,0,0.0620747142958579,0.112131862580613,0.0636471582781649,0.404234377916439,0,0,0.134704106029175,0,0,0.0814032686109745,0,0,0.359300808426348,0,0,0,0,0,0 | ||
|short_description=p@chr12:6453568..6453570,- | |short_description=p@chr12:6453568..6453570,- | ||
}} | }} |
Latest revision as of 11:15, 24 July 2015
Short description: | p@chr12:6453568..6453570, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:6453568..6453570, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.02e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 4.22e-21 | 1 |
seminal fluid secreting gland | 4.22e-21 | 1 |
lower lobe of right lung | 5.16e-21 | 1 |
right lung lobe | 5.16e-21 | 1 |
lower lobe of lung | 5.16e-21 | 1 |
lobe of lung | 5.16e-21 | 1 |
right lung | 5.16e-21 | 1 |
testis | 8.06e-11 | 8 |
male reproductive organ | 4.04e-08 | 11 |
male genital duct | 6.34e-08 | 3 |
internal male genitalia | 6.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 2.73e-11 | 2 |
pancreatic carcinoma | 2.73e-11 | 2 |
pancreatic ductal adenocarcinoma | 2.73e-11 | 2 |