Personal tools

CL:0000336: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{CL |id=CL:0000336 |name=adrenal medulla chromaffin cell |namespace=cell |def="A cell found within the adrenal medulla that secrete biogenic amine hormones upon stimulati...")
 
No edit summary
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{CL
{{CL
|id=CL:0000336
|id=CL:0000336
|name=adrenal medulla chromaffin cell
|name=adrenal gland;;adrenal medulla chromaffin cell
|namespace=cell
|namespace=cell;;efo
|def="A cell found within the adrenal medulla that secrete biogenic amine hormones upon stimulation." [GOC:tfm, http://www.britannica.com/EBchecked/topic/6405/adrenal-gland]
|def="A cell found within the adrenal medulla that secrete biogenic amine hormones upon stimulation." [GOC:tfm, http://www.britannica.com/EBchecked/topic/6405/adrenal-gland]
|xref=FMA:69262
|xref=FMA:69262
|is_a=CL:0000150;;CL:0000166;;CL:0000457
|is_a=CL:0000457;;CL:1000426;;EFO:0000797;;EFO:0003773
|synonym="medullary chromaffin cell of adrenal gland" EXACT [FMA:69262]
|synonym="medullary chromaffin cell of adrenal gland" EXACT [FMA:69262]
|comment=
|comment=
Line 14: Line 14:
|obo_creation_date=
|obo_creation_date=
|subset=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=CL:0000011
|develops_from=CL:0000011
Line 20: Line 19:
|located_in=
|located_in=
|part_of=UBERON:0001236
|part_of=UBERON:0001236
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.owl
|is_obsolete=
|preceded_by=
}}
}}

Latest revision as of 13:00, 27 June 2012

Name:adrenal gland;;adrenal medulla chromaffin cell
Namespace:cell;;efo
Definition:"A cell found within the adrenal medulla that secrete biogenic amine hormones upon stimulation." [GOC:tfm, http://www.britannica.com/EBchecked/topic/6405/adrenal-gland]
Xrefs:
links:
FMA:69262
Synonyms: "medullary chromaffin cell of adrenal gland" EXACT [FMA:69262]
Alt_id: CL:1000422


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:CL:0000457(biogenic amine secreting cell),CL:1000426(chromaffin cell of adrenal gland),EFO:0000797(),EFO:0003773()
develops_from:CL:0000011(migratory trunk neural crest cell)
part_of:UBERON:0001236(adrenal medulla)



Children


is a:FF:0000008 (adrenal chromaffin cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.




Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000336 (adrenal gland;;adrenal medulla chromaffin cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


No analysis results for this cluster