FFCP PHASE1:Hg19::chr12:82750873..82750891,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:82750873..82750891,- | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_at_chr12:82750873..82750891,- | |description=CAGE_peak_at_chr12:82750873..82750891,- | ||
|id=chr12:82750873..82750891,- | |id=chr12:82750873..82750891,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000511;5.97e-34;1!CL:0002625;5.97e-34;1!CL:0000216;5.97e-34;1!CL:0000746;2.07e-12;3!CL:0000737;1.22e-09;4!CL:0000097;5.35e-08;5!CL:0002537;6.78e-08;5!CL:0000154;8.72e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,3.61e-34,1;CL:0002625,3.61e-34,1;CL:0000216,3.61e-34,1;CL:0000746,2.07e-12,3;CL:0000513,2.07e-12,3;CL:0000737,1.22e-09,4;CL:0000097,5.35e-08,5;CL:0002028,5.35e-08,5;CL:0002537,7.49e-08,5;CL:0000154,8.02e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000513;2.07e-12;3 | |||
|ontology_enrichment_disease=DOID:162!2.98e-09!235;DOID:0050687!3.46e-09!143;DOID:14566!5.33e-09!239;DOID:305!1.81e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;5.97e-34;1!UBERON:0001343;5.97e-34;1!UBERON:0004910;5.97e-34;1!UBERON:0004813;5.97e-34;1!UBERON:0004909;9.86e-18;2!UBERON:0005904;1.50e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,3.61e-34,1;UBERON:0001343,3.61e-34,1;UBERON:0004910,3.61e-34,1;UBERON:0005154,3.61e-34,1;UBERON:0005295,3.61e-34,1;UBERON:0004813,3.61e-34,1;UBERON:0005297,3.61e-34,1;UBERON:0005294,3.61e-34,1;UBERON:0010141,3.61e-34,1;UBERON:0005891,3.61e-34,1;UBERON:0004909,7.67e-18,2;UBERON:0004871,2.01e-17,8;UBERON:0005904,1.32e-09,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0.136874425072884,0.251085279189606,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0.411167888021826,0,0.28769239232215,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0.622822248995575,0,0,0.434377689410233,0,0.368277635987565,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0.196709770113833,0,0.822405995998037,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506039384039006,0,0,0,0,0,0,0,0,0,0.534880391567015,0,2.43806866313962,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.231860809950154,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,93.6060152002293,0.176096868026452,0.414656231081544,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0.646882724578552,0.641715181398742,0.254094624222463,0,0.773288812777695,0,0,0,0,0,0,0.500170521059677,0,0.415941723061614,0,0.157702415033935,0.117141414992713,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0.256278298511402,0,0.160853921143607,0,0,0,0,0,0.116210378459959,0,0,0.184161977871793,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,1.6068392984416,0,0,0,0.137836572484531,0,0.290033387828457,0.170453254832202,0,0,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0.0711418433484141,0,0,0,0.211673582723883,0,0,0.228234679033192,0,0,0,0.321176150207399,0.403599414382095,0,0,0,0,0,0.19538809540204,0,0,0.270455678475983,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0.123084805461069,0,0.0898683511473268,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0.227586896570999,0.254253650292766,0,0,0,0.173624994933292,0,0.120596438625408,0,0,0,0,0,0,0,0,0.23056390438806,0,0.108647371922008,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0.123563938946503,0.208843899010911,0,0,0.468528891450678,0.91227394607833,0,0,0,0,0,0,0,0,0,0.330991955875499,0,1.19472429772959,0.284609546029793,0,0.173559738335131,0.0979923974143777,0.0870592065804026,0.17472666824203,0.343972064943233,0.19351266257817,0.146178634172371,0.164230914106418,0.0969890164884194,0.0882561266915003,0,0,0.19871461170299,0,0.586654148204409,0,0,0,0,0.114536596165916,0,0.14405479798815,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0.0787831823072236,0,0.26961417541674,0.0984274815147488,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0,0,0,0,0.105600336519406,0.179287339332845,0,0,0,0,0,0,0,0,0.164185041498678,1.19271615249795,0,0,0,0,0,0,0,0.320362237703084,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0.276697269872462,0,0.151649117541648,0,0.235265819698172,0,0.144921028610825,0,0,0,0,0,0,0.228840068396924,0,0,0,0.159296767163702,0,0,0.414706207840855,0,0,0,0.380805212168795,0,0,0,0,0.398095888698616,0.400027764663154,0,0.336749488765919,0,0,0,0,0,0,0.734210113519403,0.179088841081487,0,0,0.176689145945881,0.192914038270915,0,0,0.345430341731199,0.303859956177382,0,0,0,0,0.327609848846413,0.245772908753719,0.422624246717254,0,0,0,0.567515953566836,0,0,0,0,0,0.314531883711793,0,0.169732529954025,0.212574920101683,0,0,0,0.0788617450012534,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0,0.322951291263702,0,0,0,0.366857197043358,0.115525666150338,0,0,0.198916222116275,0,0.20170506870352,0,0,0.327543835020193,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0.527613733078862,0.511049710558381,0,0,0,0,0.0887023701626388,0,0.171488009437418,0,0,0,0.222462803784138,0,0,0,0,0.431855182437243,0.47775168788705,0,0.158013611732727,0,0,0,0,0,0,0,0,0.0852134047591577,0,0.4582137370881,0,0,0.111855431797792,0,0,0,0,0,0,0.467878926924211,0,0,0.5647304101948,0.219881033490858,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0.178553938605658,0,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0.101988829741982,0,0.0918948995348449,0,0.0757786982182394,0.803892390468535,0,0.103432995861895,0,0,0,0,0,0.0636471582781649,0.202117188958219,0,0,0,0,0,0.0814032686109745,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0.136874425072884,0.251085279189606,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0.411167888021826,0,0.28769239232215,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0.199463657621632,0,0.290209238628584,0,0.622822248995575,0,0,0.434377689410233,0,0.368277635987565,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0.196709770113833,0,0.822405995998037,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506039384039006,0,0,0,0,0,0,0,0,0,0.534880391567015,0,2.43806866313962,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.231860809950154,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,93.6060152002293,0.176096868026452,0.414656231081544,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0.646882724578552,0.641715181398742,0.254094624222463,0,0.773288812777695,0,0,0,0,0,0,0.500170521059677,0,0.415941723061614,0,0.157702415033935,0.117141414992713,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0.256278298511402,0,0.160853921143607,0,0,0,0,0,0.116210378459959,0,0,0.184161977871793,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,1.6068392984416,0,0,0,0.137836572484531,0,0.290033387828457,0.170453254832202,0,0,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0.0711418433484141,0,0,0,0.211673582723883,0,0,0.228234679033192,0,0,0,0.321176150207399,0.403599414382095,0,0,0,0,0,0.19538809540204,0,0,0.270455678475983,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0.123084805461069,0,0.0898683511473268,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0.227586896570999,0.254253650292766,0,0,0,0.173624994933292,0,0.120596438625408,0,0,0,0,0,0,0,0,0.23056390438806,0,0.108647371922008,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0.123563938946503,0.208843899010911,0,0,0.468528891450678,0.91227394607833,0,0,0,0,0,0,0,0,0,0.330991955875499,0,1.19472429772959,0.284609546029793,0,0.173559738335131,0.0979923974143777,0.0870592065804026,0.17472666824203,0.343972064943233,0.19351266257817,0.146178634172371,0.164230914106418,0.0969890164884194,0.0882561266915003,0,0,0.19871461170299,0,0.586654148204409,0,0,0,0,0.114536596165916,0,0.14405479798815,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0.0787831823072236,0,0.26961417541674,0.0984274815147488,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0,0,0,0,0.105600336519406,0.179287339332845,0,0,0,0,0,0,0,0,0.164185041498678,1.19271615249795,0,0,0,0,0,0,0,0.320362237703084,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0.276697269872462,0,0.151649117541648,0,0.235265819698172,0,0.144921028610825,0,0,0,0,0,0,0.228840068396924,0,0,0,0.159296767163702,0,0,0.414706207840855,0,0,0,0.380805212168795,0,0,0,0,0.398095888698616,0.400027764663154,0,0.336749488765919,0,0,0,0,0,0,0.734210113519403,0.179088841081487,0,0,0.176689145945881,0.192914038270915,0,0,0.345430341731199,0.303859956177382,0,0,0,0,0.327609848846413,0.245772908753719,0.422624246717254,0,0,0,0.567515953566836,0,0,0,0,0,0.314531883711793,0,0.169732529954025,0.212574920101683,0,0,0,0.0788617450012534,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0,0.322951291263702,0,0,0,0.366857197043358,0.115525666150338,0,0,0.198916222116275,0,0.20170506870352,0,0,0.327543835020193,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,0.527613733078862,0.511049710558381,0,0,0,0,0.0887023701626388,0,0.171488009437418,0,0,0,0.222462803784138,0,0,0,0,0.431855182437243,0.47775168788705,0,0.158013611732727,0,0,0,0,0,0,0,0,0.0852134047591577,0,0.4582137370881,0,0,0.111855431797792,0,0,0,0,0,0,0.467878926924211,0,0,0.5647304101948,0.219881033490858,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0.178553938605658,0,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0.101988829741982,0,0.0918948995348449,0,0.0757786982182394,0.803892390468535,0,0.103432995861895,0,0,0,0,0,0.0636471582781649,0.202117188958219,0,0,0,0,0,0.0814032686109745,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr12:82750873..82750891,- | |short_description=p@chr12:82750873..82750891,- | ||
}} | }} |
Latest revision as of 12:58, 24 July 2015
Short description: | p@chr12:82750873..82750891, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:82750873..82750891, - |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 3.61e-34 | 1 |
seminiferous tubule epithelial cell | 3.61e-34 | 1 |
Sertoli cell | 3.61e-34 | 1 |
cardiac muscle cell | 2.07e-12 | 3 |
cardiac muscle myoblast | 2.07e-12 | 3 |
striated muscle cell | 1.22e-09 | 4 |
mast cell | 5.35e-08 | 5 |
basophil mast progenitor cell | 5.35e-08 | 5 |
amnion mesenchymal stem cell | 7.49e-08 | 5 |
protein secreting cell | 8.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 3.61e-34 | 1 |
seminiferous tubule of testis | 3.61e-34 | 1 |
epithelium of male gonad | 3.61e-34 | 1 |
epithelial cord | 3.61e-34 | 1 |
sex cord | 3.61e-34 | 1 |
seminiferous tubule epithelium | 3.61e-34 | 1 |
testis sex cord | 3.61e-34 | 1 |
genital ridge | 3.61e-34 | 1 |
primitive sex cord of indifferent gonad | 3.61e-34 | 1 |
coelomic epithelium | 3.61e-34 | 1 |
epithelium of gonad | 7.67e-18 | 2 |
somatic layer of lateral plate mesoderm | 2.01e-17 | 8 |
duct of male reproductive system | 1.32e-09 | 4 |